RNA–Protein interactions for RNA: ENST00000477893.1

ERCC8-205, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 2

Gene ERCC8, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-205ENST00000477893 TAC4Q86UU9 113 aa8.63□□□□□ -1.03
ERCC8-205ENST00000477893 SLC47A2Q86VL8 602 aa8.63□□□□□ -1.03
ERCC8-205ENST00000477893 DEFB119Q8N690 84 aa8.63□□□□□ -1.03
ERCC8-205ENST00000477893 IRGQQ8WZA9 623 aa8.63□□□□□ -1.03
ERCC8-205ENST00000477893 PIWIL1Q96J94 861 aaKnown RBP8.63□□□□□ -1.03
ERCC8-205ENST00000477893 HSFY1Q96LI6 401 aa8.63□□□□□ -1.03
ERCC8-205ENST00000477893 VPS16Q9H269 839 aa8.63□□□□□ -1.03
ERCC8-205ENST00000477893 PDCL3Q9H2J4 239 aa8.63□□□□□ -1.03
ERCC8-205ENST00000477893 SYNCQ9H7C4 482 aa8.63□□□□□ -1.03
ERCC8-205ENST00000477893 FAM204AQ9H8W3 233 aa8.63□□□□□ -1.03
ERCC8-205ENST00000477893 STIM2Q9P246 746 aa8.63□□□□□ -1.03
ERCC8-205ENST00000477893 CDV3Q9UKY7 258 aaKnown RBP8.63□□□□□ -1.03
ERCC8-205ENST00000477893 HBS1LQ9Y450 684 aaKnown RBP8.63□□□□□ -1.03
ERCC8-205ENST00000477893 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa8.62□□□□□ -1.03
ERCC8-205ENST00000477893 CCDC163A0A0D9SF12 145 aa8.62□□□□□ -1.03
ERCC8-205ENST00000477893 GTPBP10A4D1E9 387 aaKnown RBP8.62□□□□□ -1.03
ERCC8-205ENST00000477893 FOXN3O00409 490 aaPredicted RBP8.62□□□□□ -1.03
ERCC8-205ENST00000477893 PAPSS1O43252 624 aaPredicted RBP8.62□□□□□ -1.03
ERCC8-205ENST00000477893 TBL1XO60907 577 aa8.62□□□□□ -1.03
ERCC8-205ENST00000477893 EPN2O95208 641 aa8.62□□□□□ -1.03
ERCC8-205ENST00000477893 TGM1P22735 817 aa8.62□□□□□ -1.03
ERCC8-205ENST00000477893 NTSR1P30989 418 aa8.62□□□□□ -1.03
ERCC8-205ENST00000477893 KRT9P35527 623 aa8.62□□□□□ -1.03
ERCC8-205ENST00000477893 MPLP40238 635 aa8.62□□□□□ -1.03
ERCC8-205ENST00000477893 ACADSBP45954 432 aa8.62□□□□□ -1.03
ERCC8-205ENST00000477893 PITX1P78337 314 aaPredicted RBP8.62□□□□□ -1.03
ERCC8-205ENST00000477893 LMNB2Q03252 620 aa8.62□□□□□ -1.03
ERCC8-205ENST00000477893 STX1AQ16623 288 aa8.62□□□□□ -1.03
ERCC8-205ENST00000477893 SYPL2Q5VXT5 272 aa8.62□□□□□ -1.03
ERCC8-205ENST00000477893 OR6B2Q6IFH4 312 aa8.62□□□□□ -1.03
ERCC8-205ENST00000477893 PRR23CQ6ZRP0 262 aa8.62□□□□□ -1.03
ERCC8-205ENST00000477893 CLEC17AQ6ZS10 378 aa8.62□□□□□ -1.03
ERCC8-205ENST00000477893 TMEFF1Q8IYR6 380 aa8.62□□□□□ -1.03
ERCC8-205ENST00000477893 ZNF276Q8N554 614 aa8.62□□□□□ -1.03
ERCC8-205ENST00000477893 ZNF366Q8N895 744 aa8.62□□□□□ -1.03
ERCC8-205ENST00000477893 C12orf50Q8NA57 414 aaPredicted RBP8.62□□□□□ -1.03
ERCC8-205ENST00000477893 CYB5D2Q8WUJ1 264 aa8.62□□□□□ -1.03
ERCC8-205ENST00000477893 SHC3Q92529 594 aa8.62□□□□□ -1.03
ERCC8-205ENST00000477893 PPP1R13BQ96KQ4 1090 aa8.62□□□□□ -1.03
ERCC8-205ENST00000477893 SPACA7Q96KW9 195 aa8.62□□□□□ -1.03
ERCC8-205ENST00000477893 FAM81BQ96LP2 452 aa8.62□□□□□ -1.03
ERCC8-205ENST00000477893 PCMTD1Q96MG8 357 aaPredicted RBP8.62□□□□□ -1.03
ERCC8-205ENST00000477893 CPXM1Q96SM3 734 aa8.62□□□□□ -1.03
ERCC8-205ENST00000477893 DUSP15Q9H1R2 295 aaPredicted RBP8.62□□□□□ -1.03
ERCC8-205ENST00000477893 CD93Q9NPY3 652 aa8.62□□□□□ -1.03
ERCC8-205ENST00000477893 CALCOCO1Q9P1Z2 691 aa8.62□□□□□ -1.03
ERCC8-205ENST00000477893 EBF1Q9UH73 591 aa8.62□□□□□ -1.03
ERCC8-205ENST00000477893 CYP8B1Q9UNU6 501 aa8.62□□□□□ -1.03
ERCC8-205ENST00000477893 CNTN6Q9UQ52 1028 aa8.62□□□□□ -1.03
ERCC8-205ENST00000477893 ADGRG1Q9Y653 693 aa8.62□□□□□ -1.03
ERCC8-205ENST00000477893 CEP250Q9BV73 2442 aa8.62□□□□□ -1.03
ERCC8-205ENST00000477893 A0A0A0MRY4 1105 aa8.61□□□□□ -1.03
ERCC8-205ENST00000477893 A0A1W2PQF6 199 aa8.61□□□□□ -1.03
ERCC8-205ENST00000477893 ZBTB24O43167 697 aaPredicted RBP8.61□□□□□ -1.03
ERCC8-205ENST00000477893 SART1O43290 800 aaKnown RBP8.61□□□□□ -1.03
ERCC8-205ENST00000477893 RHOBTB1O94844 696 aa8.61□□□□□ -1.03
ERCC8-205ENST00000477893 APOEP02649 317 aa8.61□□□□□ -1.03
ERCC8-205ENST00000477893 ERBB2P04626 1255 aa8.61□□□□□ -1.03
ERCC8-205ENST00000477893 FYNP06241 537 aa8.61□□□□□ -1.03
ERCC8-205ENST00000477893 TPM2P07951 284 aa8.61□□□□□ -1.03
ERCC8-205ENST00000477893 HLA-EP13747 358 aa8.61□□□□□ -1.03
ERCC8-205ENST00000477893 GABRG2P18507 467 aa8.61□□□□□ -1.03
ERCC8-205ENST00000477893 NDUFV2P19404 249 aa8.61□□□□□ -1.03
ERCC8-205ENST00000477893 EEF1GP26641 437 aaKnown RBP8.61□□□□□ -1.03
ERCC8-205ENST00000477893 HOXD9P28356 352 aaPredicted RBP8.61□□□□□ -1.03
ERCC8-205ENST00000477893 SLC6A4P31645 630 aa8.61□□□□□ -1.03
ERCC8-205ENST00000477893 CLCN1P35523 988 aa8.61□□□□□ -1.03
ERCC8-205ENST00000477893 IL12RB1P42701 662 aa8.61□□□□□ -1.03
ERCC8-205ENST00000477893 SLC11A2P49281 568 aa8.61□□□□□ -1.03
ERCC8-205ENST00000477893 PTK2Q05397 1052 aa8.61□□□□□ -1.03
ERCC8-205ENST00000477893 KCNMA1Q12791 1236 aa8.61□□□□□ -1.03
ERCC8-205ENST00000477893 STARD3Q14849 445 aa8.61□□□□□ -1.03
ERCC8-205ENST00000477893 DRAP1Q14919 205 aaPredicted RBP8.61□□□□□ -1.03
ERCC8-205ENST00000477893 KRT31Q15323 416 aa8.61□□□□□ -1.03
ERCC8-205ENST00000477893 CSRP2Q16527 193 aa8.61□□□□□ -1.03
ERCC8-205ENST00000477893 HSF5Q4G112 596 aaPredicted RBP8.61□□□□□ -1.03
ERCC8-205ENST00000477893 FNDC3BQ53EP0 1204 aaKnown RBP8.61□□□□□ -1.03
ERCC8-205ENST00000477893 MPPE1Q53F39 396 aa8.61□□□□□ -1.03
ERCC8-205ENST00000477893 C2CD6Q53TS8 623 aa8.61□□□□□ -1.03
ERCC8-205ENST00000477893 DCAF6Q58WW2 860 aa8.61□□□□□ -1.03
ERCC8-205ENST00000477893 FAM133BQ5BKY9 247 aaKnown RBP8.61□□□□□ -1.03
ERCC8-205ENST00000477893 ZC3H12AQ5D1E8 599 aaKnown RBP8.61□□□□□ -1.03
ERCC8-205ENST00000477893 CCDC183Q5T5S1 534 aa8.61□□□□□ -1.03
ERCC8-205ENST00000477893 ADGRF1Q5T601 910 aa8.61□□□□□ -1.03
ERCC8-205ENST00000477893 RAP1GAP2Q684P5 730 aa8.61□□□□□ -1.03
ERCC8-205ENST00000477893 NUGGCQ68CJ6 796 aa8.61□□□□□ -1.03
ERCC8-205ENST00000477893 NADSYN1Q6IA69 706 aa8.61□□□□□ -1.03
ERCC8-205ENST00000477893 MSANTD2Q6P1R3 559 aa8.61□□□□□ -1.03
ERCC8-205ENST00000477893 FAM183BPQ6ZVS7 135 aa8.61□□□□□ -1.03
ERCC8-205ENST00000477893 DGLUCYQ7Z3D6 616 aa8.61□□□□□ -1.03
ERCC8-205ENST00000477893 CYP2U1Q7Z449 544 aa8.61□□□□□ -1.03
ERCC8-205ENST00000477893 RASSF3Q86WH2 238 aa8.61□□□□□ -1.03
ERCC8-205ENST00000477893 CHSY1Q86X52 802 aa8.61□□□□□ -1.03
ERCC8-205ENST00000477893 CFAP52Q8N1V2 620 aa8.61□□□□□ -1.03
ERCC8-205ENST00000477893 SCML4Q8N228 414 aa8.61□□□□□ -1.03
ERCC8-205ENST00000477893 CPXM2Q8N436 756 aa8.61□□□□□ -1.03
ERCC8-205ENST00000477893 CARNMT1Q8N4J0 409 aa8.61□□□□□ -1.03
ERCC8-205ENST00000477893 GPR161Q8N6U8 529 aaKnown RBP8.61□□□□□ -1.03
ERCC8-205ENST00000477893 WFDC5Q8TCV5 224 aa8.61□□□□□ -1.03
ERCC8-205ENST00000477893 IPO4Q8TEX9 1081 aaKnown RBP8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms