RNA–Protein interactions for RNA: ENST00000477299.5

COPS3-207, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 656 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-207ENST00000477299 STRADAQ7RTN6 431 aa16.46■□□□□ 0.23
COPS3-207ENST00000477299 SFTPA1Q8IWL2 248 aa16.46■□□□□ 0.23
COPS3-207ENST00000477299 PYROXD2Q8N2H3 581 aa16.46■□□□□ 0.23
COPS3-207ENST00000477299 PRMT1Q99873 361 aaKnown RBP16.46■□□□□ 0.23
COPS3-207ENST00000477299 TRIM10Q9UDY6 481 aa16.46■□□□□ 0.23
COPS3-207ENST00000477299 HS3ST4Q9Y661 456 aa16.46■□□□□ 0.23
COPS3-207ENST00000477299 PIAS3Q9Y6X2 628 aa16.46■□□□□ 0.23
COPS3-207ENST00000477299 NUP205Q92621 2012 aa16.45■□□□□ 0.22
COPS3-207ENST00000477299 PI4K2BG5E9Z4 385 aa16.45■□□□□ 0.22
COPS3-207ENST00000477299 FAM72CH0Y354 149 aa16.45■□□□□ 0.22
COPS3-207ENST00000477299 LRCH4O75427 683 aa16.45■□□□□ 0.22
COPS3-207ENST00000477299 NFATC1O95644 943 aa16.45■□□□□ 0.22
COPS3-207ENST00000477299 F9P00740 461 aa16.45■□□□□ 0.22
COPS3-207ENST00000477299 TACR2P21452 398 aa16.45■□□□□ 0.22
COPS3-207ENST00000477299 IL1R2P27930 398 aa16.45■□□□□ 0.22
COPS3-207ENST00000477299 ADRA1BP35368 520 aa16.45■□□□□ 0.22
COPS3-207ENST00000477299 OPRD1P41143 372 aa16.45■□□□□ 0.22
COPS3-207ENST00000477299 RPS24P62847 133 aaKnown RBP16.45■□□□□ 0.22
COPS3-207ENST00000477299 MLF2Q15773 248 aaPredicted RBP16.45■□□□□ 0.22
COPS3-207ENST00000477299 CA9Q16790 459 aa16.45■□□□□ 0.22
COPS3-207ENST00000477299 C10orf76Q5T2E6 689 aa16.45■□□□□ 0.22
COPS3-207ENST00000477299 FAM72AQ5TYM5 149 aa16.45■□□□□ 0.22
COPS3-207ENST00000477299 FYB2Q5VWT5 728 aa16.45■□□□□ 0.22
COPS3-207ENST00000477299 ASTLQ6HA08 431 aaPredicted RBP16.45■□□□□ 0.22
COPS3-207ENST00000477299 FAM72DQ6L9T8 149 aa16.45■□□□□ 0.22
COPS3-207ENST00000477299 TPRG1Q6ZUI0 275 aa16.45■□□□□ 0.22
COPS3-207ENST00000477299 FAM72BQ86X60 149 aa16.45■□□□□ 0.22
COPS3-207ENST00000477299 CIR1Q86X95 450 aaPredicted RBP16.45■□□□□ 0.22
COPS3-207ENST00000477299 UBALD2Q8IYN6 164 aa16.45■□□□□ 0.22
COPS3-207ENST00000477299 LGI2Q8N0V4 545 aa16.45■□□□□ 0.22
COPS3-207ENST00000477299 SIX5Q8N196 739 aa16.45■□□□□ 0.22
COPS3-207ENST00000477299 ATP6V0D2Q8N8Y2 350 aa16.45■□□□□ 0.22
COPS3-207ENST00000477299 DNASE1L2Q92874 299 aa16.45■□□□□ 0.22
COPS3-207ENST00000477299 ATP2A3Q93084 1043 aa16.45■□□□□ 0.22
COPS3-207ENST00000477299 IGSF8Q969P0 613 aa16.45■□□□□ 0.22
COPS3-207ENST00000477299 AZIN2Q96A70 460 aa16.45■□□□□ 0.22
COPS3-207ENST00000477299 OTUB2Q96DC9 234 aa16.45■□□□□ 0.22
COPS3-207ENST00000477299 BTN2A3PQ96KV6 586 aa16.45■□□□□ 0.22
COPS3-207ENST00000477299 PRICKLE1Q96MT3 831 aaPredicted RBP16.45■□□□□ 0.22
COPS3-207ENST00000477299 GOLPH3Q9H4A6 298 aa16.45■□□□□ 0.22
COPS3-207ENST00000477299 TRPV5Q9NQA5 729 aa16.45■□□□□ 0.22
COPS3-207ENST00000477299 WNT16Q9UBV4 365 aa16.45■□□□□ 0.22
COPS3-207ENST00000477299 FBXL21Q9UKT6 434 aa16.45■□□□□ 0.22
COPS3-207ENST00000477299 INTUQ9ULD6 942 aa16.45■□□□□ 0.22
COPS3-207ENST00000477299 ZNF510Q9Y2H8 683 aa16.45■□□□□ 0.22
COPS3-207ENST00000477299 MTF2Q9Y483 593 aaPredicted RBP16.45■□□□□ 0.22
COPS3-207ENST00000477299 HYOU1Q9Y4L1 999 aa16.45■□□□□ 0.22
COPS3-207ENST00000477299 ADGRG1Q9Y653 693 aa16.45■□□□□ 0.22
COPS3-207ENST00000477299 NEDD8-MDP1E9PL57 170 aa16.44■□□□□ 0.22
COPS3-207ENST00000477299 SPECC1L-ADORA2AF8WAN1 911 aa16.44■□□□□ 0.22
COPS3-207ENST00000477299 TNFRSF10AO00220 468 aa16.44■□□□□ 0.22
COPS3-207ENST00000477299 ADH5P11766 374 aa16.44■□□□□ 0.22
COPS3-207ENST00000477299 MIPP30301 263 aa16.44■□□□□ 0.22
COPS3-207ENST00000477299 CTHP32929 405 aa16.44■□□□□ 0.22
COPS3-207ENST00000477299 SLC11A2P49281 568 aa16.44■□□□□ 0.22
COPS3-207ENST00000477299 AUHQ13825 339 aaKnown RBP16.44■□□□□ 0.22
COPS3-207ENST00000477299 MESDQ14696 234 aa16.44■□□□□ 0.22
COPS3-207ENST00000477299 ATP13A4Q4VNC1 1196 aa16.44■□□□□ 0.22
COPS3-207ENST00000477299 FBXL22Q6P050 247 aa16.44■□□□□ 0.22
COPS3-207ENST00000477299 TRIM67Q6ZTA4 783 aa16.44■□□□□ 0.22
COPS3-207ENST00000477299 SND1Q7KZF4 910 aaKnown RBP eCLIP16.44■□□□□ 0.22
COPS3-207ENST00000477299 CHSY1Q86X52 802 aa16.44■□□□□ 0.22
COPS3-207ENST00000477299 CPXM2Q8N436 756 aa16.44■□□□□ 0.22
COPS3-207ENST00000477299 CPA6Q8N4T0 437 aa16.44■□□□□ 0.22
COPS3-207ENST00000477299 WFDC5Q8TCV5 224 aa16.44■□□□□ 0.22
COPS3-207ENST00000477299 FNIP1Q8TF40 1166 aa16.44■□□□□ 0.22
COPS3-207ENST00000477299 BBS2Q9BXC9 721 aa16.44■□□□□ 0.22
COPS3-207ENST00000477299 ARHGEF3Q9NR81 526 aa16.44■□□□□ 0.22
COPS3-207ENST00000477299 STIM2Q9P246 746 aa16.44■□□□□ 0.22
COPS3-207ENST00000477299 UVRAGQ9P2Y5 699 aa16.44■□□□□ 0.22
COPS3-207ENST00000477299 MYO1FO00160 1098 aa16.43■□□□□ 0.22
COPS3-207ENST00000477299 PJA2O43164 708 aa16.43■□□□□ 0.22
COPS3-207ENST00000477299 BUB1O43683 1085 aa16.43■□□□□ 0.22
COPS3-207ENST00000477299 TBL1XO60907 577 aa16.43■□□□□ 0.22
COPS3-207ENST00000477299 SLC2A3P11169 496 aa16.43■□□□□ 0.22
COPS3-207ENST00000477299 TYRP14679 529 aa16.43■□□□□ 0.22
COPS3-207ENST00000477299 CHKAP35790 457 aa16.43■□□□□ 0.22
COPS3-207ENST00000477299 NUMBP49757 651 aa16.43■□□□□ 0.22
COPS3-207ENST00000477299 GALK1P51570 392 aa16.43■□□□□ 0.22
COPS3-207ENST00000477299 VAV2P52735 878 aa16.43■□□□□ 0.22
COPS3-207ENST00000477299 MLLT6P55198 1093 aaPredicted RBP16.43■□□□□ 0.22
COPS3-207ENST00000477299 TAS2R40P59535 323 aa16.43■□□□□ 0.22
COPS3-207ENST00000477299 PFKPQ01813 784 aa16.43■□□□□ 0.22
COPS3-207ENST00000477299 SIGLEC14Q08ET2 396 aa16.43■□□□□ 0.22
COPS3-207ENST00000477299 PON2Q15165 354 aa16.43■□□□□ 0.22
COPS3-207ENST00000477299 BRMS1LQ5PSV4 323 aa16.43■□□□□ 0.22
COPS3-207ENST00000477299 ZNF683Q8IZ20 524 aa16.43■□□□□ 0.22
COPS3-207ENST00000477299 KIAA1958Q8N8K9 716 aa16.43■□□□□ 0.22
COPS3-207ENST00000477299 DDI1Q8WTU0 396 aa16.43■□□□□ 0.22
COPS3-207ENST00000477299 RFFLQ8WZ73 363 aa16.43■□□□□ 0.22
COPS3-207ENST00000477299 EZH1Q92800 747 aaPredicted RBP16.43■□□□□ 0.22
COPS3-207ENST00000477299 TMA16Q96EY4 203 aaKnown RBP16.43■□□□□ 0.22
COPS3-207ENST00000477299 FOXQ1Q9C009 403 aa16.43■□□□□ 0.22
COPS3-207ENST00000477299 IP6K2Q9UHH9 426 aa16.43■□□□□ 0.22
COPS3-207ENST00000477299 VANGL2Q9ULK5 521 aa16.43■□□□□ 0.22
COPS3-207ENST00000477299 FZD10Q9ULW2 581 aa16.43■□□□□ 0.22
COPS3-207ENST00000477299 FAM86C2PA6NEL3 165 aa16.42■□□□□ 0.22
COPS3-207ENST00000477299 ARHGAP6O43182 974 aa16.42■□□□□ 0.22
COPS3-207ENST00000477299 SRGAP2O75044 1071 aa16.42■□□□□ 0.22
COPS3-207ENST00000477299 MTA2O94776 668 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms