RNA–Protein interactions for RNA: ENST00000477243.1

HMGN4-202, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

TSL 3

Gene HMGN4, Length 113 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-202ENST00000477243 LRSAM1Q6UWE0 723 aa3.04□□□□□ -1.92
HMGN4-202ENST00000477243 RNF111Q6ZNA4 994 aa3.04□□□□□ -1.92
HMGN4-202ENST00000477243 DENND5BQ6ZUT9 1274 aa3.04□□□□□ -1.92
HMGN4-202ENST00000477243 LPCAT2Q7L5N7 544 aa3.04□□□□□ -1.92
HMGN4-202ENST00000477243 SYT13Q7L8C5 426 aa3.04□□□□□ -1.92
HMGN4-202ENST00000477243 MIER3Q7Z3K6 550 aa3.04□□□□□ -1.92
HMGN4-202ENST00000477243 GPR149Q86SP6 731 aa3.04□□□□□ -1.92
HMGN4-202ENST00000477243 NLRP10Q86W26 655 aa3.04□□□□□ -1.92
HMGN4-202ENST00000477243 IRF2BP1Q8IU81 584 aa3.04□□□□□ -1.92
HMGN4-202ENST00000477243 CCDC28AQ8IWP9 274 aa3.04□□□□□ -1.92
HMGN4-202ENST00000477243 ZFPM1Q8IX07 1006 aa3.04□□□□□ -1.92
HMGN4-202ENST00000477243 WDTC1Q8N5D0 677 aa3.04□□□□□ -1.92
HMGN4-202ENST00000477243 ZNF366Q8N895 744 aa3.04□□□□□ -1.92
HMGN4-202ENST00000477243 RTL3Q8N8U3 475 aaKnown RBP3.04□□□□□ -1.92
HMGN4-202ENST00000477243 DCBLD1Q8N8Z6 715 aa3.04□□□□□ -1.92
HMGN4-202ENST00000477243 MRPL43Q8N983 215 aaKnown RBP3.04□□□□□ -1.92
HMGN4-202ENST00000477243 FSIP1Q8NA03 581 aa3.04□□□□□ -1.92
HMGN4-202ENST00000477243 CNNM3Q8NE01 707 aa3.04□□□□□ -1.92
HMGN4-202ENST00000477243 IL17RDQ8NFM7 739 aa3.04□□□□□ -1.92
HMGN4-202ENST00000477243 GPR150Q8NGU9 434 aa3.04□□□□□ -1.92
HMGN4-202ENST00000477243 FIBINQ8TAL6 211 aa3.04□□□□□ -1.92
HMGN4-202ENST00000477243 IFI44Q8TCB0 444 aa3.04□□□□□ -1.92
HMGN4-202ENST00000477243 CPT1CQ8TCG5 803 aa3.04□□□□□ -1.92
HMGN4-202ENST00000477243 GTPBP3Q969Y2 492 aaKnown RBP3.04□□□□□ -1.92
HMGN4-202ENST00000477243 SLC22A18Q96BI1 424 aa3.04□□□□□ -1.92
HMGN4-202ENST00000477243 GRAMD1AQ96CP6 724 aa3.04□□□□□ -1.92
HMGN4-202ENST00000477243 CLMNQ96JQ2 1002 aa3.04□□□□□ -1.92
HMGN4-202ENST00000477243 CNDP1Q96KN2 507 aa3.04□□□□□ -1.92
HMGN4-202ENST00000477243 CFAP57Q96MR6 1250 aa3.04□□□□□ -1.92
HMGN4-202ENST00000477243 CMTM3Q96MX0 182 aa3.04□□□□□ -1.92
HMGN4-202ENST00000477243 ALPK1Q96QP1 1244 aa3.04□□□□□ -1.92
HMGN4-202ENST00000477243 CD180Q99467 661 aa3.04□□□□□ -1.92
HMGN4-202ENST00000477243 TXN2Q99757 166 aa3.04□□□□□ -1.92
HMGN4-202ENST00000477243 RHOXF2Q9BQY4 288 aa3.04□□□□□ -1.92
HMGN4-202ENST00000477243 TUBB6Q9BUF5 446 aa3.04□□□□□ -1.92
HMGN4-202ENST00000477243 CDADC1Q9BWV3 514 aa3.04□□□□□ -1.92
HMGN4-202ENST00000477243 MRPL1Q9BYD6 325 aaKnown RBP3.04□□□□□ -1.92
HMGN4-202ENST00000477243 KLHL4Q9C0H6 718 aa3.04□□□□□ -1.92
HMGN4-202ENST00000477243 TINAGL1Q9GZM7 467 aaPredicted RBP3.04□□□□□ -1.92
HMGN4-202ENST00000477243 PITHD1Q9GZP4 211 aaPredicted RBP3.04□□□□□ -1.92
HMGN4-202ENST00000477243 REXO4Q9GZR2 422 aaKnown RBP3.04□□□□□ -1.92
HMGN4-202ENST00000477243 USP44Q9H0E7 712 aa3.04□□□□□ -1.92
HMGN4-202ENST00000477243 INTS2Q9H0H0 1204 aaKnown RBP3.04□□□□□ -1.92
HMGN4-202ENST00000477243 CLSTN2Q9H4D0 955 aa3.04□□□□□ -1.92
HMGN4-202ENST00000477243 FAM83DQ9H4H8 585 aa3.04□□□□□ -1.92
HMGN4-202ENST00000477243 MTG2Q9H4K7 406 aa3.04□□□□□ -1.92
HMGN4-202ENST00000477243 RPAP3Q9H6T3 665 aaPredicted RBP3.04□□□□□ -1.92
HMGN4-202ENST00000477243 BARX1Q9HBU1 254 aaPredicted RBP3.04□□□□□ -1.92
HMGN4-202ENST00000477243 NRIP3Q9NQ35 241 aa3.04□□□□□ -1.92
HMGN4-202ENST00000477243 SNX15Q9NRS6 342 aa3.04□□□□□ -1.92
HMGN4-202ENST00000477243 AP5S1Q9NUS5 200 aa3.04□□□□□ -1.92
HMGN4-202ENST00000477243 BEX4Q9NWD9 120 aaPredicted RBP3.04□□□□□ -1.92
HMGN4-202ENST00000477243 ZNHIT6Q9NWK9 470 aaKnown RBP3.04□□□□□ -1.92
HMGN4-202ENST00000477243 UTP6Q9NYH9 597 aaKnown RBP3.04□□□□□ -1.92
HMGN4-202ENST00000477243 KCND2Q9NZV8 630 aa3.04□□□□□ -1.92
HMGN4-202ENST00000477243 RAI14Q9P0K7 980 aa3.04□□□□□ -1.92
HMGN4-202ENST00000477243 MARCH2Q9P0N8 246 aa3.04□□□□□ -1.92
HMGN4-202ENST00000477243 DNAJB9Q9UBS3 223 aa3.04□□□□□ -1.92
HMGN4-202ENST00000477243 TUBE1Q9UJT0 475 aa3.04□□□□□ -1.92
HMGN4-202ENST00000477243 MID2Q9UJV3 735 aa3.04□□□□□ -1.92
HMGN4-202ENST00000477243 PPIEQ9UNP9 301 aaKnown RBP3.04□□□□□ -1.92
HMGN4-202ENST00000477243 AURKCQ9UQB9 309 aa3.04□□□□□ -1.92
HMGN4-202ENST00000477243 PIN4Q9Y237 131 aaKnown RBP3.04□□□□□ -1.92
HMGN4-202ENST00000477243 CHKBQ9Y259 395 aa3.04□□□□□ -1.92
HMGN4-202ENST00000477243 GDAQ9Y2T3 454 aa3.04□□□□□ -1.92
HMGN4-202ENST00000477243 C2CD2Q9Y426 696 aa3.04□□□□□ -1.92
HMGN4-202ENST00000477243 KCNE2Q9Y6J6 123 aa3.04□□□□□ -1.92
HMGN4-202ENST00000477243 FAM186AA6NE01 2351 aa3.04□□□□□ -1.92
HMGN4-202ENST00000477243 ABCA6Q8N139 1617 aa3.04□□□□□ -1.92
HMGN4-202ENST00000477243 COL22A1Q8NFW1 1626 aaPredicted RBP3.04□□□□□ -1.92
HMGN4-202ENST00000477243 NLRP1Q9C000 1473 aa3.03□□□□□ -1.92
HMGN4-202ENST00000477243 RYR3Q15413 4870 aa3.03□□□□□ -1.92
HMGN4-202ENST00000477243 WDR33Q9C0J8 1336 aaKnown RBP3.03□□□□□ -1.92
HMGN4-202ENST00000477243 LTBP1Q14766 1721 aa3.03□□□□□ -1.92
HMGN4-202ENST00000477243 LOC100509620A0A075B734 347 aa3.03□□□□□ -1.92
HMGN4-202ENST00000477243 A0A087WZ62 844 aa3.03□□□□□ -1.92
HMGN4-202ENST00000477243 GPR75-ASB3A0A0A6YYF3 556 aa3.03□□□□□ -1.92
HMGN4-202ENST00000477243 A0A0G2JPF8 293 aa3.03□□□□□ -1.92
HMGN4-202ENST00000477243 PNMA6EA0A0J9YXQ4 647 aa3.03□□□□□ -1.92
HMGN4-202ENST00000477243 LOC102723971A0A1B0GUV8 181 aa3.03□□□□□ -1.92
HMGN4-202ENST00000477243 A0A1W2PRV1 198 aa3.03□□□□□ -1.92
HMGN4-202ENST00000477243 CTAGE9A4FU28 777 aa3.03□□□□□ -1.92
HMGN4-202ENST00000477243 SLC35F4A4IF30 521 aa3.03□□□□□ -1.92
HMGN4-202ENST00000477243 NPIPB15A6NHN6 443 aaPredicted RBP3.03□□□□□ -1.92
HMGN4-202ENST00000477243 EIF4E1BA6NMX2 242 aaKnown RBP3.03□□□□□ -1.92
HMGN4-202ENST00000477243 C16orf96A6NNT2 1141 aa3.03□□□□□ -1.92
HMGN4-202ENST00000477243 GPR89AB7ZAQ6 455 aa3.03□□□□□ -1.92
HMGN4-202ENST00000477243 HNRNPCL3B7ZW38 293 aa3.03□□□□□ -1.92
HMGN4-202ENST00000477243 FAM86B1E9PN63 330 aa3.03□□□□□ -1.92
HMGN4-202ENST00000477243 GCOM1H8Y6P7 765 aaPredicted RBP3.03□□□□□ -1.92
HMGN4-202ENST00000477243 RAB27BO00194 218 aa3.03□□□□□ -1.92
HMGN4-202ENST00000477243 F2RL2O00254 374 aa3.03□□□□□ -1.92
HMGN4-202ENST00000477243 TM4SF5O14894 197 aa3.03□□□□□ -1.92
HMGN4-202ENST00000477243 SLC27A2O14975 620 aa3.03□□□□□ -1.92
HMGN4-202ENST00000477243 CCP110O43303 1012 aa3.03□□□□□ -1.92
HMGN4-202ENST00000477243 HNRNPRO43390 633 aaKnown RBP3.03□□□□□ -1.92
HMGN4-202ENST00000477243 BBOX1O75936 387 aa3.03□□□□□ -1.92
HMGN4-202ENST00000477243 GCNT3O95395 438 aa3.03□□□□□ -1.92
HMGN4-202ENST00000477243 CBX7O95931 251 aa3.03□□□□□ -1.92
HMGN4-202ENST00000477243 AHSGP02765 367 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms