RNA–Protein interactions for RNA: ENST00000477174.1

ACTN4-205, Transcript of actinin alpha 4, humanhuman

TSL 3

Gene ACTN4, Length 544 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-205ENST00000477174 USP34Q70CQ2 3546 aa13.93□□□□□ -0.18
ACTN4-205ENST00000477174 GOLGA6L7A0A1B0GV03 622 aa13.93□□□□□ -0.18
ACTN4-205ENST00000477174 ANTXRLA6NF34 631 aa13.93□□□□□ -0.18
ACTN4-205ENST00000477174 M0QYT0 321 aa13.93□□□□□ -0.18
ACTN4-205ENST00000477174 SGK1O00141 431 aa13.93□□□□□ -0.18
ACTN4-205ENST00000477174 HRO43593 1189 aa13.93□□□□□ -0.18
ACTN4-205ENST00000477174 NTSR1P30989 418 aa13.93□□□□□ -0.18
ACTN4-205ENST00000477174 SLC6A4P31645 630 aa13.93□□□□□ -0.18
ACTN4-205ENST00000477174 NSFP46459 744 aaKnown RBP13.93□□□□□ -0.18
ACTN4-205ENST00000477174 PITX1P78337 314 aaPredicted RBP13.93□□□□□ -0.18
ACTN4-205ENST00000477174 CENPCQ03188 943 aa13.93□□□□□ -0.18
ACTN4-205ENST00000477174 EIF4HQ15056 248 aaKnown RBP13.93□□□□□ -0.18
ACTN4-205ENST00000477174 NFKBIBQ15653 356 aa13.93□□□□□ -0.18
ACTN4-205ENST00000477174 CLEC16AQ2KHT3 1053 aa13.93□□□□□ -0.18
ACTN4-205ENST00000477174 MS4A13Q5J8X5 152 aa13.93□□□□□ -0.18
ACTN4-205ENST00000477174 FAM102AQ5T9C2 384 aaPredicted RBP13.93□□□□□ -0.18
ACTN4-205ENST00000477174 NADSYN1Q6IA69 706 aa13.93□□□□□ -0.18
ACTN4-205ENST00000477174 RFWD3Q6PCD5 774 aa13.93□□□□□ -0.18
ACTN4-205ENST00000477174 MMS22LQ6ZRQ5 1243 aa13.93□□□□□ -0.18
ACTN4-205ENST00000477174 ASCL5Q7RTU5 278 aa13.93□□□□□ -0.18
ACTN4-205ENST00000477174 PHF13Q86YI8 300 aaPredicted RBP13.93□□□□□ -0.18
ACTN4-205ENST00000477174 SUMF1Q8NBK3 374 aa13.93□□□□□ -0.18
ACTN4-205ENST00000477174 HJURPQ8NCD3 748 aaPredicted RBP13.93□□□□□ -0.18
ACTN4-205ENST00000477174 SLC30A5Q8TAD4 765 aa13.93□□□□□ -0.18
ACTN4-205ENST00000477174 UCMAQ8WVF2 138 aa13.93□□□□□ -0.18
ACTN4-205ENST00000477174 PGAP3Q96FM1 320 aaPredicted RBP13.93□□□□□ -0.18
ACTN4-205ENST00000477174 POLMQ9NP87 494 aaPredicted RBP13.93□□□□□ -0.18
ACTN4-205ENST00000477174 ELOVL2Q9NXB9 296 aa13.93□□□□□ -0.18
ACTN4-205ENST00000477174 TMEM59LQ9UK28 342 aa13.93□□□□□ -0.18
ACTN4-205ENST00000477174 HCN2Q9UL51 889 aa13.93□□□□□ -0.18
ACTN4-205ENST00000477174 CLEC4EQ9ULY5 219 aa13.93□□□□□ -0.18
ACTN4-205ENST00000477174 PAXBP1Q9Y5B6 917 aa13.93□□□□□ -0.18
ACTN4-205ENST00000477174 ATG2BQ96BY7 2078 aa13.92□□□□□ -0.18
ACTN4-205ENST00000477174 TYW5A2RUC4 315 aaKnown RBP13.92□□□□□ -0.18
ACTN4-205ENST00000477174 AXIN1O15169 862 aa13.92□□□□□ -0.18
ACTN4-205ENST00000477174 TBL1XO60907 577 aa13.92□□□□□ -0.18
ACTN4-205ENST00000477174 ADAM23O75077 832 aa13.92□□□□□ -0.18
ACTN4-205ENST00000477174 ALDH1A2O94788 518 aa13.92□□□□□ -0.18
ACTN4-205ENST00000477174 MOCS2O96007 188 aaPredicted RBP13.92□□□□□ -0.18
ACTN4-205ENST00000477174 PXNP49023 591 aaPredicted RBP13.92□□□□□ -0.18
ACTN4-205ENST00000477174 CXCR3P49682 368 aa13.92□□□□□ -0.18
ACTN4-205ENST00000477174 NME3Q13232 169 aa13.92□□□□□ -0.18
ACTN4-205ENST00000477174 GEN1Q17RS7 908 aa13.92□□□□□ -0.18
ACTN4-205ENST00000477174 C2CD6Q53TS8 623 aa13.92□□□□□ -0.18
ACTN4-205ENST00000477174 ACBD5Q5T8D3 534 aaPredicted RBP13.92□□□□□ -0.18
ACTN4-205ENST00000477174 SFMBT2Q5VUG0 894 aa13.92□□□□□ -0.18
ACTN4-205ENST00000477174 PPP1R2P3Q6NXS1 205 aa13.92□□□□□ -0.18
ACTN4-205ENST00000477174 LRSAM1Q6UWE0 723 aa13.92□□□□□ -0.18
ACTN4-205ENST00000477174 TMEM92Q6UXU6 159 aa13.92□□□□□ -0.18
ACTN4-205ENST00000477174 SND1Q7KZF4 910 aaKnown RBP eCLIP13.92□□□□□ -0.188e-20■□□□□ 9.3
ACTN4-205ENST00000477174 ANKS1BQ7Z6G8 1248 aa13.92□□□□□ -0.18
ACTN4-205ENST00000477174 KIAA0907Q7Z7F0 614 aaPredicted RBP13.92□□□□□ -0.18
ACTN4-205ENST00000477174 RASSF3Q86WH2 238 aa13.92□□□□□ -0.18
ACTN4-205ENST00000477174 CCDC117Q8IWD4 279 aaPredicted RBP13.92□□□□□ -0.18
ACTN4-205ENST00000477174 CHPFQ8IZ52 775 aa13.92□□□□□ -0.18
ACTN4-205ENST00000477174 FIBINQ8TAL6 211 aa13.92□□□□□ -0.18
ACTN4-205ENST00000477174 IQCDQ96DY2 449 aa13.92□□□□□ -0.18
ACTN4-205ENST00000477174 HHIPQ96QV1 700 aa13.92□□□□□ -0.18
ACTN4-205ENST00000477174 TTYH3Q9C0H2 523 aa13.92□□□□□ -0.18
ACTN4-205ENST00000477174 NUCKS1Q9H1E3 243 aaKnown RBP13.92□□□□□ -0.18
ACTN4-205ENST00000477174 TSPY26PQ9H489 355 aa13.92□□□□□ -0.18
ACTN4-205ENST00000477174 WDCPQ9H6R7 721 aa13.92□□□□□ -0.18
ACTN4-205ENST00000477174 ADAM22Q9P0K1 906 aa13.92□□□□□ -0.18
ACTN4-205ENST00000477174 EP300Q09472 2414 aaPredicted RBP13.92□□□□□ -0.18
ACTN4-205ENST00000477174 GPR179Q6PRD1 2367 aa13.91□□□□□ -0.18
ACTN4-205ENST00000477174 SYNJ2BP-COX16A0A087WUM0 186 aa13.91□□□□□ -0.18
ACTN4-205ENST00000477174 LRRC53A6NM62 1247 aa13.91□□□□□ -0.18
ACTN4-205ENST00000477174 GOLGA8SH3BPF8 625 aa13.91□□□□□ -0.18
ACTN4-205ENST00000477174 CALB1P05937 261 aa13.91□□□□□ -0.18
ACTN4-205ENST00000477174 TPM3P06753 285 aa13.91□□□□□ -0.18
ACTN4-205ENST00000477174 TNFAIP3P21580 790 aa13.91□□□□□ -0.18
ACTN4-205ENST00000477174 HLA-FP30511 346 aa13.91□□□□□ -0.18
ACTN4-205ENST00000477174 HOXC13P31276 330 aa13.91□□□□□ -0.18
ACTN4-205ENST00000477174 PBX1P40424 430 aa13.91□□□□□ -0.18
ACTN4-205ENST00000477174 GSCP56915 257 aaPredicted RBP13.91□□□□□ -0.18
ACTN4-205ENST00000477174 RPS24P62847 133 aaKnown RBP13.91□□□□□ -0.18
ACTN4-205ENST00000477174 PTP4A2Q12974 167 aa13.91□□□□□ -0.18
ACTN4-205ENST00000477174 SIM2Q14190 667 aaPredicted RBP13.91□□□□□ -0.18
ACTN4-205ENST00000477174 BRMS1LQ5PSV4 323 aa13.91□□□□□ -0.18
ACTN4-205ENST00000477174 EGFLAMQ63HQ2 1017 aa13.91□□□□□ -0.18
ACTN4-205ENST00000477174 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.91□□□□□ -0.18
ACTN4-205ENST00000477174 WFIKKN2Q8TEU8 576 aa13.91□□□□□ -0.18
ACTN4-205ENST00000477174 GAB3Q8WWW8 586 aa13.91□□□□□ -0.18
ACTN4-205ENST00000477174 PRMT1Q99873 361 aaKnown RBP13.91□□□□□ -0.18
ACTN4-205ENST00000477174 GABRG3Q99928 467 aa13.91□□□□□ -0.18
ACTN4-205ENST00000477174 SYT11Q9BT88 431 aa13.91□□□□□ -0.18
ACTN4-205ENST00000477174 SEPT11Q9NVA2 429 aaKnown RBP13.91□□□□□ -0.18
ACTN4-205ENST00000477174 COX16Q9P0S2 106 aa13.91□□□□□ -0.18
ACTN4-205ENST00000477174 THAP10Q9P2Z0 257 aaPredicted RBP13.91□□□□□ -0.18
ACTN4-205ENST00000477174 XPO7Q9UIA9 1087 aaKnown RBP13.91□□□□□ -0.18
ACTN4-205ENST00000477174 RAB23Q9ULC3 237 aa13.91□□□□□ -0.18
ACTN4-205ENST00000477174 FRYLO94915 3013 aa13.91□□□□□ -0.18
ACTN4-205ENST00000477174 A0A1W2PQJ5 194 aa13.9□□□□□ -0.18
ACTN4-205ENST00000477174 F5H5T6 163 aa13.9□□□□□ -0.18
ACTN4-205ENST00000477174 ZBTB24O43167 697 aaPredicted RBP13.9□□□□□ -0.18
ACTN4-205ENST00000477174 RPP40O75818 363 aaKnown RBP13.9□□□□□ -0.18
ACTN4-205ENST00000477174 KRT3P12035 628 aa13.9□□□□□ -0.18
ACTN4-205ENST00000477174 TACR2P21452 398 aa13.9□□□□□ -0.18
ACTN4-205ENST00000477174 FLT3P36888 993 aa13.9□□□□□ -0.18
ACTN4-205ENST00000477174 PRKCIP41743 596 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms