RNA–Protein interactions for RNA: ENST00000476342.1

HOXB3-208, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 1,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-208ENST00000476342 ATXN1P54253 815 aaKnown RBP30.64■■■□□ 2.49
HOXB3-208ENST00000476342 C10orf76Q5T2E6 689 aa30.64■■■□□ 2.49
HOXB3-208ENST00000476342 CWF19L1Q69YN2 538 aaKnown RBP30.64■■■□□ 2.49
HOXB3-208ENST00000476342 CHSY1Q86X52 802 aa30.64■■■□□ 2.49
HOXB3-208ENST00000476342 FAM131BQ86XD5 332 aa30.64■■■□□ 2.49
HOXB3-208ENST00000476342 FBXL6Q8N531 539 aa30.64■■■□□ 2.49
HOXB3-208ENST00000476342 PJA1Q8NG27 643 aa30.64■■■□□ 2.49
HOXB3-208ENST00000476342 BHMTQ93088 406 aa30.64■■■□□ 2.49
HOXB3-208ENST00000476342 XPO7Q9UIA9 1087 aaKnown RBP30.64■■■□□ 2.49
HOXB3-208ENST00000476342 NCAM2O15394 837 aa30.63■■■□□ 2.49
HOXB3-208ENST00000476342 CACNG3O60359 315 aa30.63■■■□□ 2.49
HOXB3-208ENST00000476342 PSMA2P25787 234 aa30.63■■■□□ 2.49
HOXB3-208ENST00000476342 TARSP26639 723 aaKnown RBP30.63■■■□□ 2.49
HOXB3-208ENST00000476342 SLC6A4P31645 630 aa30.63■■■□□ 2.49
HOXB3-208ENST00000476342 MRE11P49959 708 aa30.63■■■□□ 2.49
HOXB3-208ENST00000476342 GRSF1Q12849 480 aaKnown RBP eCLIP30.63■■■□□ 2.49
HOXB3-208ENST00000476342 PREPLQ4J6C6 727 aaPredicted RBP30.63■■■□□ 2.49
HOXB3-208ENST00000476342 FYB2Q5VWT5 728 aa30.63■■■□□ 2.49
HOXB3-208ENST00000476342 SUGP1Q8IWZ8 645 aaKnown RBP30.63■■■□□ 2.49
HOXB3-208ENST00000476342 TMA16Q96EY4 203 aaKnown RBP30.63■■■□□ 2.49
HOXB3-208ENST00000476342 NUP85Q9BW27 656 aa30.63■■■□□ 2.49
HOXB3-208ENST00000476342 PLK2Q9NYY3 685 aa30.63■■■□□ 2.49
HOXB3-208ENST00000476342 SIT1Q9Y3P8 196 aa30.63■■■□□ 2.49
HOXB3-208ENST00000476342 KIAA1549LQ6ZVL6 1849 aa30.62■■■□□ 2.49
HOXB3-208ENST00000476342 GOLGA6L7A0A1B0GV03 622 aa30.62■■■□□ 2.49
HOXB3-208ENST00000476342 FAM170BA6NMN3 283 aa30.62■■■□□ 2.49
HOXB3-208ENST00000476342 TSPAN3O60637 253 aa30.62■■■□□ 2.49
HOXB3-208ENST00000476342 TMEM253P0C7T8 217 aa30.62■■■□□ 2.49
HOXB3-208ENST00000476342 AOC1P19801 751 aa30.62■■■□□ 2.49
HOXB3-208ENST00000476342 TACR2P21452 398 aa30.62■■■□□ 2.49
HOXB3-208ENST00000476342 GALK1P51570 392 aa30.62■■■□□ 2.49
HOXB3-208ENST00000476342 CLCN5P51795 746 aa30.62■■■□□ 2.49
HOXB3-208ENST00000476342 OGDHQ02218 1023 aa30.62■■■□□ 2.49
HOXB3-208ENST00000476342 ARL13BQ3SXY8 428 aa30.62■■■□□ 2.49
HOXB3-208ENST00000476342 MS4A13Q5J8X5 152 aa30.62■■■□□ 2.49
HOXB3-208ENST00000476342 ACBD5Q5T8D3 534 aaPredicted RBP30.62■■■□□ 2.49
HOXB3-208ENST00000476342 SH3PXD2AQ5TCZ1 1133 aa30.62■■■□□ 2.49
HOXB3-208ENST00000476342 PIK3R6Q5UE93 754 aa30.62■■■□□ 2.49
HOXB3-208ENST00000476342 RAP1GAP2Q684P5 730 aa30.62■■■□□ 2.49
HOXB3-208ENST00000476342 RFWD3Q6PCD5 774 aa30.62■■■□□ 2.49
HOXB3-208ENST00000476342 ETFBKMTQ8IXQ9 262 aa30.62■■■□□ 2.49
HOXB3-208ENST00000476342 NAT16Q8N8M0 369 aa30.62■■■□□ 2.49
HOXB3-208ENST00000476342 ARHGEF26Q96DR7 871 aa30.62■■■□□ 2.49
HOXB3-208ENST00000476342 BAG1Q99933 345 aaPredicted RBP30.62■■■□□ 2.49
HOXB3-208ENST00000476342 PACSIN1Q9BY11 444 aa30.62■■■□□ 2.49
HOXB3-208ENST00000476342 F5H5T6 163 aa30.61■■■□□ 2.49
HOXB3-208ENST00000476342 GFRA2O00451 464 aa30.61■■■□□ 2.49
HOXB3-208ENST00000476342 PAGE1O75459 146 aa30.61■■■□□ 2.49
HOXB3-208ENST00000476342 HDAC4P56524 1084 aa30.61■■■□□ 2.49
HOXB3-208ENST00000476342 TMEM196Q5HYL7 178 aa30.61■■■□□ 2.49
HOXB3-208ENST00000476342 ASTLQ6HA08 431 aaPredicted RBP30.61■■■□□ 2.49
HOXB3-208ENST00000476342 C12orf40Q86WS4 652 aa30.61■■■□□ 2.49
HOXB3-208ENST00000476342 PNKPQ96T60 521 aa30.61■■■□□ 2.49
HOXB3-208ENST00000476342 LUC7LQ9NQ29 371 aaKnown RBP30.61■■■□□ 2.49
HOXB3-208ENST00000476342 DEC1Q9P2X7 70 aa30.61■■■□□ 2.49
HOXB3-208ENST00000476342 UVRAGQ9P2Y5 699 aa30.61■■■□□ 2.49
HOXB3-208ENST00000476342 TULP3O75386 442 aa30.6■■■□□ 2.49
HOXB3-208ENST00000476342 IPO7O95373 1038 aaKnown RBP30.6■■■□□ 2.49
HOXB3-208ENST00000476342 DRD1P21728 446 aa30.6■■■□□ 2.49
HOXB3-208ENST00000476342 SPA17Q15506 151 aa30.6■■■□□ 2.49
HOXB3-208ENST00000476342 MPP7Q5T2T1 576 aa30.6■■■□□ 2.49
HOXB3-208ENST00000476342 HJURPQ8NCD3 748 aaPredicted RBP30.6■■■□□ 2.49
HOXB3-208ENST00000476342 DNAJC17Q9NVM6 304 aaKnown RBP30.6■■■□□ 2.49
HOXB3-208ENST00000476342 CTTNBP2NLQ9P2B4 639 aa30.6■■■□□ 2.49
HOXB3-208ENST00000476342 INTUQ9ULD6 942 aa30.6■■■□□ 2.49
HOXB3-208ENST00000476342 SOWAHDA6NJG2 315 aa30.59■■■□□ 2.49
HOXB3-208ENST00000476342 RNF8O76064 485 aa30.59■■■□□ 2.49
HOXB3-208ENST00000476342 LCA5LO95447 670 aa30.59■■■□□ 2.49
HOXB3-208ENST00000476342 LRRC32Q14392 662 aa30.59■■■□□ 2.49
HOXB3-208ENST00000476342 NAIF1Q69YI7 327 aaPredicted RBP30.59■■■□□ 2.49
HOXB3-208ENST00000476342 LGI2Q8N0V4 545 aa30.59■■■□□ 2.49
HOXB3-208ENST00000476342 ZNF564Q8TBZ8 553 aaPredicted RBP30.59■■■□□ 2.49
HOXB3-208ENST00000476342 HAPLN3Q96S86 360 aa30.59■■■□□ 2.49
HOXB3-208ENST00000476342 ANAPC7Q9UJX3 599 aa30.59■■■□□ 2.49
HOXB3-208ENST00000476342 MTF2Q9Y483 593 aaPredicted RBP30.59■■■□□ 2.49
HOXB3-208ENST00000476342 HS3ST4Q9Y661 456 aa30.59■■■□□ 2.49
HOXB3-208ENST00000476342 ZDBF2Q9HCK1 2354 aa30.59■■■□□ 2.49
HOXB3-208ENST00000476342 SLC6A11P48066 632 aa30.58■■■□□ 2.49
HOXB3-208ENST00000476342 RAB6CQ53S08 254 aa30.58■■■□□ 2.49
HOXB3-208ENST00000476342 DGKKQ5KSL6 1271 aa30.58■■■□□ 2.49
HOXB3-208ENST00000476342 NUDT18Q6ZVK8 323 aa30.58■■■□□ 2.49
HOXB3-208ENST00000476342 CCDC105Q8IYK2 499 aa30.58■■■□□ 2.49
HOXB3-208ENST00000476342 ZNF687Q8N1G0 1237 aa30.58■■■□□ 2.49
HOXB3-208ENST00000476342 ANP32BQ92688 251 aaKnown RBP30.58■■■□□ 2.49
HOXB3-208ENST00000476342 PRICKLE1Q96MT3 831 aaPredicted RBP30.58■■■□□ 2.49
HOXB3-208ENST00000476342 PRMT1Q99873 361 aaKnown RBP30.58■■■□□ 2.49
HOXB3-208ENST00000476342 NCAPGQ9BPX3 1015 aa30.58■■■□□ 2.49
HOXB3-208ENST00000476342 TRIM7Q9C029 511 aa30.58■■■□□ 2.49
HOXB3-208ENST00000476342 SIK2Q9H0K1 926 aa30.58■■■□□ 2.49
HOXB3-208ENST00000476342 RAB6CQ9H0N0 254 aa30.58■■■□□ 2.49
HOXB3-208ENST00000476342 ARHGEF4Q9NR80 690 aa30.58■■■□□ 2.49
HOXB3-208ENST00000476342 EPN1Q9Y6I3 576 aaPredicted RBP30.58■■■□□ 2.49
HOXB3-208ENST00000476342 EIF3CLB5ME19 914 aaKnown RBP30.57■■■□□ 2.48
HOXB3-208ENST00000476342 TBL1XO60907 577 aa30.57■■■□□ 2.48
HOXB3-208ENST00000476342 NDUFA10O95299 355 aa30.57■■■□□ 2.48
HOXB3-208ENST00000476342 APODP05090 189 aa30.57■■■□□ 2.48
HOXB3-208ENST00000476342 HOXD9P28356 352 aaPredicted RBP30.57■■■□□ 2.48
HOXB3-208ENST00000476342 DGKGP49619 791 aa30.57■■■□□ 2.48
HOXB3-208ENST00000476342 ZNF252P-AS1Q0IIN9 211 aa30.57■■■□□ 2.48
HOXB3-208ENST00000476342 ACAP1Q15027 740 aa30.57■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms