RNA–Protein interactions for RNA: ENST00000475832.1

MRPL55-227, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-227ENST00000475832 TLR5O60602 858 aa12.66□□□□□ -0.38
MRPL55-227ENST00000475832 CD48P09326 243 aa12.66□□□□□ -0.38
MRPL55-227ENST00000475832 ZDHHC11BP0C7U3 371 aa12.66□□□□□ -0.38
MRPL55-227ENST00000475832 ALADP13716 330 aa12.66□□□□□ -0.38
MRPL55-227ENST00000475832 HCAR3P49019 387 aa12.66□□□□□ -0.38
MRPL55-227ENST00000475832 NR2C2P49116 596 aa12.66□□□□□ -0.38
MRPL55-227ENST00000475832 TUBP50607 506 aa12.66□□□□□ -0.38
MRPL55-227ENST00000475832 TPI1P60174 286 aa12.66□□□□□ -0.38
MRPL55-227ENST00000475832 ERVFC1P60507 584 aa12.66□□□□□ -0.38
MRPL55-227ENST00000475832 SLC7A5Q01650 507 aa12.66□□□□□ -0.38
MRPL55-227ENST00000475832 CUL1Q13616 776 aa12.66□□□□□ -0.38
MRPL55-227ENST00000475832 SIX1Q15475 284 aaPredicted RBP12.66□□□□□ -0.38
MRPL55-227ENST00000475832 TRIP4Q15650 581 aaPredicted RBP12.66□□□□□ -0.38
MRPL55-227ENST00000475832 CA9Q16790 459 aa12.66□□□□□ -0.38
MRPL55-227ENST00000475832 PPM1LQ5SGD2 360 aa12.66□□□□□ -0.38
MRPL55-227ENST00000475832 SNX30Q5VWJ9 437 aa12.66□□□□□ -0.38
MRPL55-227ENST00000475832 TMCO3Q6UWJ1 677 aa12.66□□□□□ -0.38
MRPL55-227ENST00000475832 DNAJB7Q7Z6W7 309 aaPredicted RBP12.66□□□□□ -0.38
MRPL55-227ENST00000475832 JAMLQ86YT9 394 aa12.66□□□□□ -0.38
MRPL55-227ENST00000475832 UNC45BQ8IWX7 931 aa12.66□□□□□ -0.38
MRPL55-227ENST00000475832 RSAD2Q8WXG1 361 aa12.66□□□□□ -0.38
MRPL55-227ENST00000475832 CASP10Q92851 521 aa12.66□□□□□ -0.38
MRPL55-227ENST00000475832 SLCO2A1Q92959 643 aa12.66□□□□□ -0.38
MRPL55-227ENST00000475832 FAF2Q96CS3 445 aa12.66□□□□□ -0.38
MRPL55-227ENST00000475832 CSPG4P5Q96PW8 444 aa12.66□□□□□ -0.38
MRPL55-227ENST00000475832 PLEKHA4Q9H4M7 779 aa12.66□□□□□ -0.38
MRPL55-227ENST00000475832 EPB41L5Q9HCM4 733 aa12.66□□□□□ -0.38
MRPL55-227ENST00000475832 WDR6Q9NNW5 1121 aaKnown RBP12.66□□□□□ -0.38
MRPL55-227ENST00000475832 ARHGEF38Q9NXL2 777 aa12.66□□□□□ -0.38
MRPL55-227ENST00000475832 SFMBT1Q9UHJ3 866 aa12.66□□□□□ -0.38
MRPL55-227ENST00000475832 RAB21Q9UL25 225 aa12.66□□□□□ -0.38
MRPL55-227ENST00000475832 HBS1LQ9Y450 684 aaKnown RBP12.66□□□□□ -0.38
MRPL55-227ENST00000475832 NR2E1Q9Y466 385 aa12.66□□□□□ -0.38
MRPL55-227ENST00000475832 CLUHO75153 1309 aa12.65□□□□□ -0.38
MRPL55-227ENST00000475832 SLC12A8A0AV02 714 aa12.65□□□□□ -0.38
MRPL55-227ENST00000475832 CFAP69A5D8W1 941 aa12.65□□□□□ -0.38
MRPL55-227ENST00000475832 ZNF840PA6NDX5 716 aa12.65□□□□□ -0.38
MRPL55-227ENST00000475832 SPDYE4A6NLX3 237 aa12.65□□□□□ -0.38
MRPL55-227ENST00000475832 TTI1O43156 1089 aa12.65□□□□□ -0.38
MRPL55-227ENST00000475832 C8AP07357 584 aa12.65□□□□□ -0.38
MRPL55-227ENST00000475832 DNAJB1P25685 340 aa12.65□□□□□ -0.38
MRPL55-227ENST00000475832 SERPINB6P35237 376 aa12.65□□□□□ -0.38
MRPL55-227ENST00000475832 VCPP55072 806 aaKnown RBP12.65□□□□□ -0.38
MRPL55-227ENST00000475832 EIF3EP60228 445 aaKnown RBP12.65□□□□□ -0.38
MRPL55-227ENST00000475832 COG7P83436 770 aa12.65□□□□□ -0.38
MRPL55-227ENST00000475832 OTUD4Q01804 1114 aaKnown RBP12.65□□□□□ -0.38
MRPL55-227ENST00000475832 RING1Q06587 406 aa12.65□□□□□ -0.38
MRPL55-227ENST00000475832 MMRN1Q13201 1228 aa12.65□□□□□ -0.38
MRPL55-227ENST00000475832 COL19A1Q14993 1142 aa12.65□□□□□ -0.38
MRPL55-227ENST00000475832 NUGGCQ68CJ6 796 aa12.65□□□□□ -0.38
MRPL55-227ENST00000475832 SLC9A4Q6AI14 798 aa12.65□□□□□ -0.38
MRPL55-227ENST00000475832 LILRA6Q6PI73 481 aa12.65□□□□□ -0.38
MRPL55-227ENST00000475832 KLHDC10Q6PID8 442 aa12.65□□□□□ -0.38
MRPL55-227ENST00000475832 LRRC31Q6UY01 552 aa12.65□□□□□ -0.38
MRPL55-227ENST00000475832 RFX8Q6ZV50 586 aa12.65□□□□□ -0.38
MRPL55-227ENST00000475832 MIB1Q86YT6 1006 aa12.65□□□□□ -0.38
MRPL55-227ENST00000475832 CDKL3Q8IVW4 592 aaPredicted RBP12.65□□□□□ -0.38
MRPL55-227ENST00000475832 CCDC89Q8N998 374 aa12.65□□□□□ -0.38
MRPL55-227ENST00000475832 EIF1ADQ8N9N8 165 aaKnown RBP12.65□□□□□ -0.38
MRPL55-227ENST00000475832 BBOF1Q8ND07 529 aa12.65□□□□□ -0.38
MRPL55-227ENST00000475832 ACTL9Q8TC94 416 aa12.65□□□□□ -0.38
MRPL55-227ENST00000475832 HDAC7Q8WUI4 952 aa12.65□□□□□ -0.38
MRPL55-227ENST00000475832 ATG4AQ8WYN0 398 aa12.65□□□□□ -0.38
MRPL55-227ENST00000475832 MRPS31Q92665 395 aaKnown RBP12.65□□□□□ -0.38
MRPL55-227ENST00000475832 NKD2Q969F2 451 aaPredicted RBP12.65□□□□□ -0.38
MRPL55-227ENST00000475832 ERP44Q9BS26 406 aa12.65□□□□□ -0.38
MRPL55-227ENST00000475832 ADAM33Q9BZ11 813 aa12.65□□□□□ -0.38
MRPL55-227ENST00000475832 CATSPERBQ9H7T0 1116 aa12.65□□□□□ -0.38
MRPL55-227ENST00000475832 ARFGAP3Q9NP61 516 aa12.65□□□□□ -0.38
MRPL55-227ENST00000475832 CD320Q9NPF0 282 aa12.65□□□□□ -0.38
MRPL55-227ENST00000475832 CWC15Q9P013 229 aaKnown RBP12.65□□□□□ -0.38
MRPL55-227ENST00000475832 CALCOCO1Q9P1Z2 691 aa12.65□□□□□ -0.38
MRPL55-227ENST00000475832 OR12D3Q9UGF7 316 aa12.65□□□□□ -0.38
MRPL55-227ENST00000475832 RAD54BQ9Y620 910 aa12.65□□□□□ -0.38
MRPL55-227ENST00000475832 H7C0C1 242 aa12.64□□□□□ -0.39
MRPL55-227ENST00000475832 SGK1O00141 431 aa12.64□□□□□ -0.39
MRPL55-227ENST00000475832 FGF10O15520 208 aaPredicted RBP12.64□□□□□ -0.39
MRPL55-227ENST00000475832 MSI1O43347 362 aaKnown RBP12.64□□□□□ -0.39
MRPL55-227ENST00000475832 XYLBO75191 536 aa12.64□□□□□ -0.39
MRPL55-227ENST00000475832 CSPG5O95196 566 aa12.64□□□□□ -0.39
MRPL55-227ENST00000475832 MOCS2O96007 188 aaPredicted RBP12.64□□□□□ -0.39
MRPL55-227ENST00000475832 ITGAVP06756 1048 aa12.64□□□□□ -0.39
MRPL55-227ENST00000475832 SPATA31D3P0C874 917 aa12.64□□□□□ -0.39
MRPL55-227ENST00000475832 HMGA1P17096 107 aaKnown RBP12.64□□□□□ -0.39
MRPL55-227ENST00000475832 GOT1P17174 413 aa12.64□□□□□ -0.39
MRPL55-227ENST00000475832 TNFRSF8P28908 595 aa12.64□□□□□ -0.39
MRPL55-227ENST00000475832 CDC25CP30307 473 aa12.64□□□□□ -0.39
MRPL55-227ENST00000475832 ACTN2P35609 894 aa12.64□□□□□ -0.39
MRPL55-227ENST00000475832 ATP5OP48047 213 aa12.64□□□□□ -0.39
MRPL55-227ENST00000475832 HARS2P49590 506 aaKnown RBP12.64□□□□□ -0.39
MRPL55-227ENST00000475832 CALCOCO2Q13137 446 aa12.64□□□□□ -0.39
MRPL55-227ENST00000475832 HLTFQ14527 1009 aaKnown RBP eCLIP12.64□□□□□ -0.39
MRPL55-227ENST00000475832 TTC27Q6P3X3 843 aa12.64□□□□□ -0.39
MRPL55-227ENST00000475832 DARS2Q6PI48 645 aaKnown RBP12.64□□□□□ -0.39
MRPL55-227ENST00000475832 C1orf228Q6PIY5 440 aa12.64□□□□□ -0.39
MRPL55-227ENST00000475832 SPATA31D4Q6ZUB0 917 aa12.64□□□□□ -0.39
MRPL55-227ENST00000475832 GJD3Q8N144 294 aa12.64□□□□□ -0.39
MRPL55-227ENST00000475832 PLD5Q8N7P1 536 aa12.64□□□□□ -0.39
MRPL55-227ENST00000475832 PCDH19Q8TAB3 1148 aa12.64□□□□□ -0.39
MRPL55-227ENST00000475832 IFT81Q8WYA0 676 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms