RNA–Protein interactions for RNA: ENST00000474956.1

RNF220-211, Transcript of ring finger protein 220, humanhuman

TSL 2

Gene RNF220, Length 3,303 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-211ENST00000474956 CSPG4P5Q96PW8 444 aa12.85□□□□□ -0.35
RNF220-211ENST00000474956 MMADHCQ9H3L0 296 aaPredicted RBP12.85□□□□□ -0.35
RNF220-211ENST00000474956 E7ESA3 106 aa12.85□□□□□ -0.35
RNF220-211ENST00000474956 FAM72CH0Y354 149 aa12.85□□□□□ -0.35
RNF220-211ENST00000474956 UPP2O95045 317 aa12.85□□□□□ -0.35
RNF220-211ENST00000474956 TAF6P49848 677 aa12.85□□□□□ -0.35
RNF220-211ENST00000474956 ZBTB16Q05516 673 aa12.85□□□□□ -0.35
RNF220-211ENST00000474956 BMPR2Q13873 1038 aa12.85□□□□□ -0.35
RNF220-211ENST00000474956 FAM47CQ5HY64 1035 aa12.85□□□□□ -0.35
RNF220-211ENST00000474956 FAM72AQ5TYM5 149 aa12.85□□□□□ -0.35
RNF220-211ENST00000474956 SLC9A4Q6AI14 798 aa12.85□□□□□ -0.35
RNF220-211ENST00000474956 GDF6Q6KF10 455 aaPredicted RBP12.85□□□□□ -0.35
RNF220-211ENST00000474956 FAM72DQ6L9T8 149 aa12.85□□□□□ -0.35
RNF220-211ENST00000474956 FAM72BQ86X60 149 aa12.85□□□□□ -0.35
RNF220-211ENST00000474956 NT5DC4Q86YG4 428 aa12.85□□□□□ -0.35
RNF220-211ENST00000474956 RASAL3Q86YV0 1011 aa12.85□□□□□ -0.35
RNF220-211ENST00000474956 VPS52Q8N1B4 723 aa12.85□□□□□ -0.35
RNF220-211ENST00000474956 STKLD1Q8NE28 680 aa12.85□□□□□ -0.35
RNF220-211ENST00000474956 KIAA1257Q9ULG3 409 aa12.85□□□□□ -0.35
RNF220-211ENST00000474956 TEX264Q9Y6I9 313 aa12.85□□□□□ -0.35
RNF220-211ENST00000474956 MYBPHLA2RUH7 354 aa12.84□□□□□ -0.35
RNF220-211ENST00000474956 DPYSL4O14531 572 aa12.84□□□□□ -0.35
RNF220-211ENST00000474956 CYB561D2O14569 222 aa12.84□□□□□ -0.35
RNF220-211ENST00000474956 TUBP50607 506 aa12.84□□□□□ -0.35
RNF220-211ENST00000474956 BCAT1P54687 386 aa12.84□□□□□ -0.35
RNF220-211ENST00000474956 CDK16Q00536 496 aa12.84□□□□□ -0.35
RNF220-211ENST00000474956 SLC34A1Q06495 639 aa12.84□□□□□ -0.35
RNF220-211ENST00000474956 KRT72Q14CN4 511 aa12.84□□□□□ -0.35
RNF220-211ENST00000474956 ACSBG2Q5FVE4 666 aa12.84□□□□□ -0.35
RNF220-211ENST00000474956 GNASQ5JWF2 1037 aa12.84□□□□□ -0.35
RNF220-211ENST00000474956 THEMIS2Q5TEJ8 643 aa12.84□□□□□ -0.35
RNF220-211ENST00000474956 DENND5BQ6ZUT9 1274 aa12.84□□□□□ -0.35
RNF220-211ENST00000474956 ZNF534Q76KX8 674 aa12.84□□□□□ -0.35
RNF220-211ENST00000474956 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.84□□□□□ -0.35
RNF220-211ENST00000474956 SKA1Q96BD8 255 aa12.84□□□□□ -0.35
RNF220-211ENST00000474956 TRPM7Q96QT4 1865 aa12.84□□□□□ -0.35
RNF220-211ENST00000474956 AGO3Q9H9G7 860 aaKnown RBP12.84□□□□□ -0.35
RNF220-211ENST00000474956 CRTAC1Q9NQ79 661 aa12.84□□□□□ -0.35
RNF220-211ENST00000474956 DTLQ9NZJ0 730 aa12.84□□□□□ -0.35
RNF220-211ENST00000474956 CDY2AQ9Y6F7 541 aa12.84□□□□□ -0.35
RNF220-211ENST00000474956 CREB3O43889 395 aa12.84□□□□□ -0.35
RNF220-211ENST00000474956 SP100P23497 879 aaPredicted RBP12.84□□□□□ -0.35
RNF220-211ENST00000474956 SULT1E1P49888 294 aa12.84□□□□□ -0.35
RNF220-211ENST00000474956 KPNB1Q14974 876 aaKnown RBP12.84□□□□□ -0.35
RNF220-211ENST00000474956 ACAP1Q15027 740 aa12.84□□□□□ -0.35
RNF220-211ENST00000474956 ARHGAP17Q68EM7 881 aa12.84□□□□□ -0.35
RNF220-211ENST00000474956 NCBP2-AS2Q69YL0 99 aa12.84□□□□□ -0.35
RNF220-211ENST00000474956 CDHR3Q6ZTQ4 885 aa12.84□□□□□ -0.35
RNF220-211ENST00000474956 CHSY1Q86X52 802 aa12.84□□□□□ -0.35
RNF220-211ENST00000474956 DEPDC1BQ8WUY9 529 aa12.84□□□□□ -0.35
RNF220-211ENST00000474956 TEKT4Q8WW24 435 aa12.84□□□□□ -0.35
RNF220-211ENST00000474956 DLGAP2Q9P1A6 1054 aa12.84□□□□□ -0.35
RNF220-211ENST00000474956 GABRQQ9UN88 632 aa12.84□□□□□ -0.35
RNF220-211ENST00000474956 ASB3Q9Y575 518 aa12.84□□□□□ -0.35
RNF220-211ENST00000474956 CAPN9O14815 690 aa12.83□□□□□ -0.35
RNF220-211ENST00000474956 MFSD11O43934 449 aa12.83□□□□□ -0.35
RNF220-211ENST00000474956 HUS1O60921 280 aa12.83□□□□□ -0.35
RNF220-211ENST00000474956 PSMG1O95456 288 aa12.83□□□□□ -0.35
RNF220-211ENST00000474956 TSHRP16473 764 aa12.83□□□□□ -0.35
RNF220-211ENST00000474956 SERPINB3P29508 390 aa12.83□□□□□ -0.35
RNF220-211ENST00000474956 BOLA3Q53S33 107 aa12.83□□□□□ -0.35
RNF220-211ENST00000474956 AP1ARQ63HQ0 302 aa12.83□□□□□ -0.35
RNF220-211ENST00000474956 LRRC74BQ6ZQY2 392 aa12.83□□□□□ -0.35
RNF220-211ENST00000474956 SLC26A9Q7LBE3 791 aa12.83□□□□□ -0.35
RNF220-211ENST00000474956 LRRC6Q86X45 466 aa12.83□□□□□ -0.35
RNF220-211ENST00000474956 CRYBG2Q8N1P7 616 aa12.83□□□□□ -0.35
RNF220-211ENST00000474956 PPFIBP2Q8ND30 876 aa12.83□□□□□ -0.35
RNF220-211ENST00000474956 SCG3Q8WXD2 468 aaKnown RBP12.83□□□□□ -0.35
RNF220-211ENST00000474956 USP6NLQ92738 828 aa12.83□□□□□ -0.35
RNF220-211ENST00000474956 STMN2Q93045 179 aa12.83□□□□□ -0.35
RNF220-211ENST00000474956 PAPOLBQ9NRJ5 636 aaKnown RBP12.83□□□□□ -0.35
RNF220-211ENST00000474956 SCOCQ9UIL1 159 aa12.83□□□□□ -0.35
RNF220-211ENST00000474956 MAGED2Q9UNF1 606 aaPredicted RBP12.83□□□□□ -0.35
RNF220-211ENST00000474956 ST3GAL5Q9UNP4 418 aa12.83□□□□□ -0.35
RNF220-211ENST00000474956 DERAQ9Y315 318 aa12.83□□□□□ -0.35
RNF220-211ENST00000474956 C2orf71A6NGG8 1288 aa12.83□□□□□ -0.36
RNF220-211ENST00000474956 SMAPO00193 183 aa12.83□□□□□ -0.36
RNF220-211ENST00000474956 LPXNO60711 386 aa12.83□□□□□ -0.36
RNF220-211ENST00000474956 KRT36O76013 467 aa12.83□□□□□ -0.36
RNF220-211ENST00000474956 CHRNA1P02708 482 aa12.83□□□□□ -0.36
RNF220-211ENST00000474956 C1QAP02745 245 aa12.83□□□□□ -0.36
RNF220-211ENST00000474956 MT-ND3P03897 115 aa12.83□□□□□ -0.36
RNF220-211ENST00000474956 ESRRAP11474 423 aaPredicted RBP12.83□□□□□ -0.36
RNF220-211ENST00000474956 PAPOLAP51003 745 aaKnown RBP12.83□□□□□ -0.36
RNF220-211ENST00000474956 SCNN1GP51170 649 aa12.83□□□□□ -0.36
RNF220-211ENST00000474956 CRHR2Q13324 411 aa12.83□□□□□ -0.36
RNF220-211ENST00000474956 TFDP2Q14188 446 aa12.83□□□□□ -0.36
RNF220-211ENST00000474956 RBBP5Q15291 538 aaKnown RBP12.83□□□□□ -0.36
RNF220-211ENST00000474956 NBPF20Q3BBV1 942 aa12.83□□□□□ -0.36
RNF220-211ENST00000474956 BSPRYQ5W0U4 402 aa12.83□□□□□ -0.36
RNF220-211ENST00000474956 CLEC20AQ6ZU45 233 aa12.83□□□□□ -0.36
RNF220-211ENST00000474956 CTAGE3PQ8IX95 158 aa12.83□□□□□ -0.36
RNF220-211ENST00000474956 ARHGAP24Q8N264 748 aa12.83□□□□□ -0.36
RNF220-211ENST00000474956 TMEM120AQ9BXJ8 343 aa12.83□□□□□ -0.36
RNF220-211ENST00000474956 FRMD8P1Q9BZ68 369 aaPredicted RBP12.83□□□□□ -0.36
RNF220-211ENST00000474956 AP5M1Q9H0R1 490 aa12.83□□□□□ -0.36
RNF220-211ENST00000474956 PIGVQ9NUD9 493 aa12.83□□□□□ -0.36
RNF220-211ENST00000474956 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.83□□□□□ -0.36
RNF220-211ENST00000474956 STX18Q9P2W9 335 aaKnown RBP12.83□□□□□ -0.36
RNF220-211ENST00000474956 FYNP06241 537 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms