RNA–Protein interactions for RNA: ENST00000474643.5

VARS-223, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-223ENST00000474643 DUOXA1Q1HG43 343 aa15.75■□□□□ 0.11
VARS-223ENST00000474643 FILIP1LQ4L180 1135 aa15.75■□□□□ 0.11
VARS-223ENST00000474643 FNDC3BQ53EP0 1204 aaKnown RBP15.75■□□□□ 0.11
VARS-223ENST00000474643 N4BP2L1Q5TBK1 243 aaPredicted RBP15.75■□□□□ 0.11
VARS-223ENST00000474643 SH3PXD2AQ5TCZ1 1133 aa15.75■□□□□ 0.11
VARS-223ENST00000474643 KLHDC7AQ5VTJ3 777 aa15.75■□□□□ 0.11
VARS-223ENST00000474643 KIAA1211LQ6NV74 962 aa15.75■□□□□ 0.11
VARS-223ENST00000474643 CACUL1Q86Y37 369 aa15.75■□□□□ 0.11
VARS-223ENST00000474643 UNC45BQ8IWX7 931 aa15.75■□□□□ 0.11
VARS-223ENST00000474643 DHX40Q8IX18 779 aaKnown RBP15.75■□□□□ 0.11
VARS-223ENST00000474643 ABCA7Q8IZY2 2146 aa15.75■□□□□ 0.11
VARS-223ENST00000474643 KCTD13Q8WZ19 329 aa15.75■□□□□ 0.11
VARS-223ENST00000474643 PRCCQ92733 491 aaPredicted RBP15.75■□□□□ 0.11
VARS-223ENST00000474643 FOXJ1Q92949 421 aa15.75■□□□□ 0.11
VARS-223ENST00000474643 FAM149B1Q96BN6 582 aa15.75■□□□□ 0.11
VARS-223ENST00000474643 TMA16Q96EY4 203 aaKnown RBP15.75■□□□□ 0.11
VARS-223ENST00000474643 MIS12Q9H081 205 aa15.75■□□□□ 0.11
VARS-223ENST00000474643 SLC6A17Q9H1V8 727 aa15.75■□□□□ 0.11
VARS-223ENST00000474643 ELOVL2Q9NXB9 296 aa15.75■□□□□ 0.11
VARS-223ENST00000474643 PLA2G4CQ9UP65 541 aa15.75■□□□□ 0.11
VARS-223ENST00000474643 FHOD1Q9Y613 1164 aa15.75■□□□□ 0.11
VARS-223ENST00000474643 NUP205Q92621 2012 aa15.74■□□□□ 0.11
VARS-223ENST00000474643 LGALS16A8MUM7 142 aa15.74■□□□□ 0.11
VARS-223ENST00000474643 GOLGA6L19H0YKK7 550 aa15.74■□□□□ 0.11
VARS-223ENST00000474643 CAPN9O14815 690 aa15.74■□□□□ 0.11
VARS-223ENST00000474643 SART1O43290 800 aaKnown RBP15.74■□□□□ 0.11
VARS-223ENST00000474643 MSI1O43347 362 aaKnown RBP15.74■□□□□ 0.11
VARS-223ENST00000474643 TIMM44O43615 452 aa15.74■□□□□ 0.11
VARS-223ENST00000474643 FBXO21O94952 628 aa15.74■□□□□ 0.11
VARS-223ENST00000474643 EPHX1P07099 455 aa15.74■□□□□ 0.11
VARS-223ENST00000474643 CHRM1P11229 460 aaPredicted RBP15.74■□□□□ 0.11
VARS-223ENST00000474643 ATP1A3P13637 1013 aa15.74■□□□□ 0.11
VARS-223ENST00000474643 ZNF18P17022 549 aa15.74■□□□□ 0.11
VARS-223ENST00000474643 ENGP17813 658 aa15.74■□□□□ 0.11
VARS-223ENST00000474643 DAOAP59103 153 aa15.74■□□□□ 0.11
VARS-223ENST00000474643 ZNF252P-AS1Q0IIN9 211 aa15.74■□□□□ 0.11
VARS-223ENST00000474643 DRAP1Q14919 205 aaPredicted RBP15.74■□□□□ 0.11
VARS-223ENST00000474643 TRIP4Q15650 581 aaPredicted RBP15.74■□□□□ 0.11
VARS-223ENST00000474643 FUT11Q495W5 492 aa15.74■□□□□ 0.11
VARS-223ENST00000474643 WDR45BQ5MNZ6 344 aa15.74■□□□□ 0.11
VARS-223ENST00000474643 NUGGCQ68CJ6 796 aa15.74■□□□□ 0.11
VARS-223ENST00000474643 NEK11Q8NG66 645 aa15.74■□□□□ 0.11
VARS-223ENST00000474643 IRGQQ8WZA9 623 aa15.74■□□□□ 0.11
VARS-223ENST00000474643 SHC3Q92529 594 aa15.74■□□□□ 0.11
VARS-223ENST00000474643 SIPA1Q96FS4 1042 aa15.74■□□□□ 0.11
VARS-223ENST00000474643 MRGPRX1Q96LB2 322 aa15.74■□□□□ 0.11
VARS-223ENST00000474643 DDX50Q9BQ39 737 aaKnown RBP15.74■□□□□ 0.11
VARS-223ENST00000474643 TRIM62Q9BVG3 475 aa15.74■□□□□ 0.11
VARS-223ENST00000474643 PDCL3Q9H2J4 239 aa15.74■□□□□ 0.11
VARS-223ENST00000474643 TSPY26PQ9H489 355 aa15.74■□□□□ 0.11
VARS-223ENST00000474643 FAM207AQ9NSI2 230 aaPredicted RBP15.74■□□□□ 0.11
VARS-223ENST00000474643 SUSD2Q9UGT4 822 aa15.74■□□□□ 0.11
VARS-223ENST00000474643 PILRBQ9UKJ0 227 aa15.74■□□□□ 0.11
VARS-223ENST00000474643 SLC6A14Q9UN76 642 aa15.74■□□□□ 0.11
VARS-223ENST00000474643 CNTN6Q9UQ52 1028 aa15.74■□□□□ 0.11
VARS-223ENST00000474643 FOXN3O00409 490 aaPredicted RBP15.73■□□□□ 0.11
VARS-223ENST00000474643 LATS1O95835 1130 aa15.73■□□□□ 0.11
VARS-223ENST00000474643 SERPINC1P01008 464 aa15.73■□□□□ 0.11
VARS-223ENST00000474643 LTFP02788 710 aa15.73■□□□□ 0.11
VARS-223ENST00000474643 SYPP08247 313 aa15.73■□□□□ 0.11
VARS-223ENST00000474643 NCAM1P13591 858 aa15.73■□□□□ 0.11
VARS-223ENST00000474643 UCHL3P15374 230 aa15.73■□□□□ 0.11
VARS-223ENST00000474643 CD6P30203 668 aa15.73■□□□□ 0.11
VARS-223ENST00000474643 KRT9P35527 623 aa15.73■□□□□ 0.11
VARS-223ENST00000474643 IL12RB1P42701 662 aa15.73■□□□□ 0.11
VARS-223ENST00000474643 BPIFB4P59827 614 aa15.73■□□□□ 0.11
VARS-223ENST00000474643 SYCP1Q15431 976 aa15.73■□□□□ 0.11
VARS-223ENST00000474643 ADGRF1Q5T601 910 aa15.73■□□□□ 0.11
VARS-223ENST00000474643 SLC23A3Q6PIS1 610 aa15.73■□□□□ 0.11
VARS-223ENST00000474643 ZNF557Q8N988 423 aaPredicted RBP15.73■□□□□ 0.11
VARS-223ENST00000474643 WFIKKN2Q8TEU8 576 aa15.73■□□□□ 0.11
VARS-223ENST00000474643 ZNF606Q8WXB4 792 aa15.73■□□□□ 0.11
VARS-223ENST00000474643 CBX8Q9HC52 389 aa15.73■□□□□ 0.11
VARS-223ENST00000474643 TMEM74BQ9NUR3 256 aa15.73■□□□□ 0.11
VARS-223ENST00000474643 THAP10Q9P2Z0 257 aaPredicted RBP15.73■□□□□ 0.11
VARS-223ENST00000474643 FBXO10Q9UK96 956 aa15.73■□□□□ 0.11
VARS-223ENST00000474643 AJAP1Q9UKB5 411 aaPredicted RBP15.73■□□□□ 0.11
VARS-223ENST00000474643 TM4SF5O14894 197 aa15.72■□□□□ 0.11
VARS-223ENST00000474643 OPHN1O60890 802 aa15.72■□□□□ 0.11
VARS-223ENST00000474643 ATP5BP06576 529 aaKnown RBP15.72■□□□□ 0.11
VARS-223ENST00000474643 SERPINF2P08697 491 aa15.72■□□□□ 0.11
VARS-223ENST00000474643 PNMA6AP0CW24 399 aaPredicted RBP15.72■□□□□ 0.11
VARS-223ENST00000474643 OXTRP30559 389 aa15.72■□□□□ 0.11
VARS-223ENST00000474643 KLK7P49862 253 aa15.72■□□□□ 0.11
VARS-223ENST00000474643 TBX4P57082 545 aa15.72■□□□□ 0.11
VARS-223ENST00000474643 POLR2FP61218 127 aaKnown RBP15.72■□□□□ 0.11
VARS-223ENST00000474643 ZNF234Q14588 700 aa15.72■□□□□ 0.11
VARS-223ENST00000474643 ST3GAL2Q16842 350 aa15.72■□□□□ 0.11
VARS-223ENST00000474643 PLEKHG6Q3KR16 790 aa15.72■□□□□ 0.11
VARS-223ENST00000474643 PMF1Q6P1K2 205 aa15.72■□□□□ 0.11
VARS-223ENST00000474643 LUZP1Q86V48 1076 aa15.72■□□□□ 0.11
VARS-223ENST00000474643 TMPRSS6Q8IU80 811 aa15.72■□□□□ 0.11
VARS-223ENST00000474643 TOE1Q96GM8 510 aaKnown RBP15.72■□□□□ 0.11
VARS-223ENST00000474643 HSFY1Q96LI6 401 aa15.72■□□□□ 0.11
VARS-223ENST00000474643 SERPINB11Q96P15 392 aa15.72■□□□□ 0.11
VARS-223ENST00000474643 SPAG5Q96R06 1193 aa15.72■□□□□ 0.11
VARS-223ENST00000474643 ZSWIM1Q9BR11 485 aa15.72■□□□□ 0.11
VARS-223ENST00000474643 MIR1-1HGQ9H1L0 117 aa15.72■□□□□ 0.11
VARS-223ENST00000474643 ACP6Q9NPH0 428 aa15.72■□□□□ 0.11
VARS-223ENST00000474643 NLRC4Q9NPP4 1024 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms