RNA–Protein interactions for RNA: ENST00000474617.1

CCM2-206, Transcript of CCM2 scaffold protein, humanhuman

TSL 5 BASIC

Gene CCM2, Length 1,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-206ENST00000474617 PPP2R5DQ14738 602 aa22.44■■□□□ 1.18
CCM2-206ENST00000474617 PAN2Q504Q3 1202 aaKnown RBP22.44■■□□□ 1.18
CCM2-206ENST00000474617 FAM126BQ8IXS8 530 aa22.44■■□□□ 1.18
CCM2-206ENST00000474617 CACNA2D3Q8IZS8 1091 aa22.44■■□□□ 1.18
CCM2-206ENST00000474617 LZTR1Q8N653 840 aa22.44■■□□□ 1.18
CCM2-206ENST00000474617 ANKS4BQ8N8V4 417 aa22.44■■□□□ 1.18
CCM2-206ENST00000474617 PPP1R2P1Q96PQ5 205 aa22.44■■□□□ 1.18
CCM2-206ENST00000474617 PLCD4Q9BRC7 762 aa22.44■■□□□ 1.18
CCM2-206ENST00000474617 TMEM175Q9BSA9 504 aa22.44■■□□□ 1.18
CCM2-206ENST00000474617 ZMYND15Q9H091 742 aa22.44■■□□□ 1.18
CCM2-206ENST00000474617 TRABDQ9H4I3 376 aa22.44■■□□□ 1.18
CCM2-206ENST00000474617 ARHGEF38Q9NXL2 777 aa22.44■■□□□ 1.18
CCM2-206ENST00000474617 DONSONQ9NYP3 566 aa22.44■■□□□ 1.18
CCM2-206ENST00000474617 TBK1Q9UHD2 729 aa22.44■■□□□ 1.18
CCM2-206ENST00000474617 TNFRSF10BO14763 440 aa22.43■■□□□ 1.18
CCM2-206ENST00000474617 FGF10O15520 208 aaPredicted RBP22.43■■□□□ 1.18
CCM2-206ENST00000474617 DDHD2O94830 711 aa22.43■■□□□ 1.18
CCM2-206ENST00000474617 SLC2A3P11169 496 aa22.43■■□□□ 1.18
CCM2-206ENST00000474617 ERCC2P18074 760 aa22.43■■□□□ 1.18
CCM2-206ENST00000474617 GRIK1P39086 918 aa22.43■■□□□ 1.18
CCM2-206ENST00000474617 OR1G1P47890 313 aa22.43■■□□□ 1.18
CCM2-206ENST00000474617 YWHAGP61981 247 aaKnown RBP eCLIP22.43■■□□□ 1.18
CCM2-206ENST00000474617 PITX1P78337 314 aaPredicted RBP22.43■■□□□ 1.18
CCM2-206ENST00000474617 NRG1Q02297 640 aaPredicted RBP22.43■■□□□ 1.18
CCM2-206ENST00000474617 EIF4EBP2Q13542 120 aaPredicted RBP22.43■■□□□ 1.18
CCM2-206ENST00000474617 BTBD8Q5XKL5 378 aa22.43■■□□□ 1.18
CCM2-206ENST00000474617 ZNF449Q6P9G9 518 aa22.43■■□□□ 1.18
CCM2-206ENST00000474617 LRRTM3Q86VH5 581 aa22.43■■□□□ 1.18
CCM2-206ENST00000474617 CYP4X1Q8N118 509 aa22.43■■□□□ 1.18
CCM2-206ENST00000474617 DQX1Q8TE96 717 aaKnown RBP22.43■■□□□ 1.18
CCM2-206ENST00000474617 CKAP2Q8WWK9 683 aa22.43■■□□□ 1.18
CCM2-206ENST00000474617 HDAC11Q96DB2 347 aa22.43■■□□□ 1.18
CCM2-206ENST00000474617 CEP295NLQ96MC4 621 aa22.43■■□□□ 1.18
CCM2-206ENST00000474617 PAFAH2Q99487 392 aa22.43■■□□□ 1.18
CCM2-206ENST00000474617 TMLHEQ9NVH6 421 aa22.43■■□□□ 1.18
CCM2-206ENST00000474617 SAMD15Q9P1V8 674 aa22.43■■□□□ 1.18
CCM2-206ENST00000474617 ZC3H7BQ9UGR2 993 aaKnown RBP22.43■■□□□ 1.18
CCM2-206ENST00000474617 SCML2Q9UQR0 700 aa22.43■■□□□ 1.18
CCM2-206ENST00000474617 NLRC5Q86WI3 1866 aa22.43■■□□□ 1.18
CCM2-206ENST00000474617 SYNJ2BP-COX16A0A087WUM0 186 aa22.42■■□□□ 1.18
CCM2-206ENST00000474617 IRAK2O43187 625 aa22.42■■□□□ 1.18
CCM2-206ENST00000474617 ZWINTO95229 277 aa22.42■■□□□ 1.18
CCM2-206ENST00000474617 CPP00450 1065 aa22.42■■□□□ 1.18
CCM2-206ENST00000474617 SSTR1P30872 391 aa22.42■■□□□ 1.18
CCM2-206ENST00000474617 SLC5A3P53794 718 aa22.42■■□□□ 1.18
CCM2-206ENST00000474617 PPIDQ08752 370 aaKnown RBP22.42■■□□□ 1.18
CCM2-206ENST00000474617 ZNF280DQ6N043 979 aa22.42■■□□□ 1.18
CCM2-206ENST00000474617 SRLQ86TD4 932 aa22.42■■□□□ 1.18
CCM2-206ENST00000474617 CAND1Q86VP6 1230 aaKnown RBP22.42■■□□□ 1.18
CCM2-206ENST00000474617 MON1AQ86VX9 555 aa22.42■■□□□ 1.18
CCM2-206ENST00000474617 ZNF280BQ86YH2 543 aa22.42■■□□□ 1.18
CCM2-206ENST00000474617 HASPINQ8TF76 798 aa22.42■■□□□ 1.18
CCM2-206ENST00000474617 C2orf15Q8WU43 125 aaKnown RBP22.42■■□□□ 1.18
CCM2-206ENST00000474617 SLC44A1Q8WWI5 657 aa22.42■■□□□ 1.18
CCM2-206ENST00000474617 P2RY11Q96G91 374 aa22.42■■□□□ 1.18
CCM2-206ENST00000474617 MAGEB18Q96M61 343 aa22.42■■□□□ 1.18
CCM2-206ENST00000474617 PRMT1Q99873 361 aaKnown RBP22.42■■□□□ 1.18
CCM2-206ENST00000474617 TKTL2Q9H0I9 626 aa22.42■■□□□ 1.18
CCM2-206ENST00000474617 COX16Q9P0S2 106 aa22.42■■□□□ 1.18
CCM2-206ENST00000474617 OR12D3Q9UGF7 316 aa22.42■■□□□ 1.18
CCM2-206ENST00000474617 CHMP2BQ9UQN3 213 aa22.42■■□□□ 1.18
CCM2-206ENST00000474617 PCDHB5Q9Y5E4 795 aa22.42■■□□□ 1.18
CCM2-206ENST00000474617 RNF103O00237 685 aa22.41■■□□□ 1.18
CCM2-206ENST00000474617 ENPP3O14638 875 aa22.41■■□□□ 1.18
CCM2-206ENST00000474617 ITGB1P05556 798 aa22.41■■□□□ 1.18
CCM2-206ENST00000474617 PRKCHP24723 683 aa22.41■■□□□ 1.18
CCM2-206ENST00000474617 CCR1P32246 355 aa22.41■■□□□ 1.18
CCM2-206ENST00000474617 PSEN1P49768 467 aa22.41■■□□□ 1.18
CCM2-206ENST00000474617 GALNT2Q10471 571 aa22.41■■□□□ 1.18
CCM2-206ENST00000474617 AP1B1Q10567 949 aa22.41■■□□□ 1.18
CCM2-206ENST00000474617 NAB1Q13506 487 aa22.41■■□□□ 1.18
CCM2-206ENST00000474617 ITIH4Q14624 930 aa22.41■■□□□ 1.18
CCM2-206ENST00000474617 ITPRIPL1Q6GPH6 555 aa22.41■■□□□ 1.18
CCM2-206ENST00000474617 LRRC8BQ6P9F7 803 aa22.41■■□□□ 1.18
CCM2-206ENST00000474617 FOXR1Q6PIV2 292 aa22.41■■□□□ 1.18
CCM2-206ENST00000474617 TAC4Q86UU9 113 aa22.41■■□□□ 1.18
CCM2-206ENST00000474617 LRRC49Q8IUZ0 686 aa22.41■■□□□ 1.18
CCM2-206ENST00000474617 GRAMD1AQ96CP6 724 aa22.41■■□□□ 1.18
CCM2-206ENST00000474617 SERPINB11Q96P15 392 aa22.41■■□□□ 1.18
CCM2-206ENST00000474617 EBNA1BP2Q99848 306 aaKnown RBP22.41■■□□□ 1.18
CCM2-206ENST00000474617 WDR83Q9BRX9 315 aaKnown RBP22.41■■□□□ 1.18
CCM2-206ENST00000474617 PRDM12Q9H4Q4 367 aa22.41■■□□□ 1.18
CCM2-206ENST00000474617 ADAM28Q9UKQ2 775 aa22.41■■□□□ 1.18
CCM2-206ENST00000474617 GOLGA6L7A0A1B0GV03 622 aa22.41■■□□□ 1.18
CCM2-206ENST00000474617 TCRBV9S1A1TA0A576 114 aa22.41■■□□□ 1.18
CCM2-206ENST00000474617 H7C4K7 107 aa22.41■■□□□ 1.18
CCM2-206ENST00000474617 TM9SF1O15321 606 aa22.41■■□□□ 1.18
CCM2-206ENST00000474617 METTL18O95568 372 aa22.41■■□□□ 1.18
CCM2-206ENST00000474617 INHBAP08476 426 aa22.41■■□□□ 1.18
CCM2-206ENST00000474617 VAV1P15498 845 aa22.41■■□□□ 1.18
CCM2-206ENST00000474617 DNAJB2P25686 324 aa22.41■■□□□ 1.18
CCM2-206ENST00000474617 GAD2Q05329 585 aa22.41■■□□□ 1.18
CCM2-206ENST00000474617 MRPL58Q14197 206 aaKnown RBP22.41■■□□□ 1.18
CCM2-206ENST00000474617 SPARCL1Q14515 664 aa22.41■■□□□ 1.18
CCM2-206ENST00000474617 NUGGCQ68CJ6 796 aa22.41■■□□□ 1.18
CCM2-206ENST00000474617 MSANTD2Q6P1R3 559 aa22.41■■□□□ 1.18
CCM2-206ENST00000474617 RGS9BPQ6ZS82 235 aa22.41■■□□□ 1.18
CCM2-206ENST00000474617 SLC26A11Q86WA9 606 aa22.41■■□□□ 1.18
CCM2-206ENST00000474617 NUP93Q8N1F7 819 aa22.41■■□□□ 1.18
CCM2-206ENST00000474617 COLGALT1Q8NBJ5 622 aa22.41■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms