RNA–Protein interactions for RNA: ENST00000474048.1

PRPF38A-202, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 1 (best)

Gene PRPF38A, Length 1,059 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-202ENST00000474048 TASP1Q9H6P5 420 aa10.62□□□□□ -0.71
PRPF38A-202ENST00000474048 HCFC1R1Q9NWW0 138 aa10.62□□□□□ -0.71
PRPF38A-202ENST00000474048 SMARCAL1Q9NZC9 954 aa10.62□□□□□ -0.71
PRPF38A-202ENST00000474048 HEY1Q9Y5J3 304 aa10.62□□□□□ -0.71
PRPF38A-202ENST00000474048 CPQQ9Y646 472 aa10.62□□□□□ -0.71
PRPF38A-202ENST00000474048 ATG2AQ2TAZ0 1938 aa10.62□□□□□ -0.71
PRPF38A-202ENST00000474048 ANAPC1Q9H1A4 1944 aa10.61□□□□□ -0.71
PRPF38A-202ENST00000474048 H7C0C1 242 aa10.61□□□□□ -0.71
PRPF38A-202ENST00000474048 PPP1R12AO14974 1030 aaPredicted RBP10.61□□□□□ -0.71
PRPF38A-202ENST00000474048 TADA3O75528 432 aa10.61□□□□□ -0.71
PRPF38A-202ENST00000474048 ECEL1O95672 775 aa10.61□□□□□ -0.71
PRPF38A-202ENST00000474048 LATS1O95835 1130 aa10.61□□□□□ -0.71
PRPF38A-202ENST00000474048 CYBBP04839 570 aa10.61□□□□□ -0.71
PRPF38A-202ENST00000474048 CD48P09326 243 aa10.61□□□□□ -0.71
PRPF38A-202ENST00000474048 GOT1P17174 413 aa10.61□□□□□ -0.71
PRPF38A-202ENST00000474048 FSHRP23945 695 aa10.61□□□□□ -0.71
PRPF38A-202ENST00000474048 ATP5OP48047 213 aa10.61□□□□□ -0.71
PRPF38A-202ENST00000474048 HCAR3P49019 387 aa10.61□□□□□ -0.71
PRPF38A-202ENST00000474048 NR2C2P49116 596 aa10.61□□□□□ -0.71
PRPF38A-202ENST00000474048 FNTAP49354 379 aa10.61□□□□□ -0.71
PRPF38A-202ENST00000474048 PGFP49763 221 aa10.61□□□□□ -0.71
PRPF38A-202ENST00000474048 EPHA5P54756 1037 aa10.61□□□□□ -0.71
PRPF38A-202ENST00000474048 DR1Q01658 176 aa10.61□□□□□ -0.71
PRPF38A-202ENST00000474048 MMRN1Q13201 1228 aa10.61□□□□□ -0.71
PRPF38A-202ENST00000474048 SNX1Q13596 522 aa10.61□□□□□ -0.71
PRPF38A-202ENST00000474048 DHX34Q14147 1143 aaKnown RBP10.61□□□□□ -0.71
PRPF38A-202ENST00000474048 PPP1R7Q15435 360 aa10.61□□□□□ -0.71
PRPF38A-202ENST00000474048 TEAD2Q15562 447 aa10.61□□□□□ -0.71
PRPF38A-202ENST00000474048 CA9Q16790 459 aa10.61□□□□□ -0.71
PRPF38A-202ENST00000474048 GLE1Q53GS7 698 aaKnown RBP10.61□□□□□ -0.71
PRPF38A-202ENST00000474048 RAP1GAP2Q684P5 730 aa10.61□□□□□ -0.71
PRPF38A-202ENST00000474048 C1orf228Q6PIY5 440 aa10.61□□□□□ -0.71
PRPF38A-202ENST00000474048 CCDC137Q6PK04 289 aaKnown RBP10.61□□□□□ -0.71
PRPF38A-202ENST00000474048 GAREM2Q75VX8 874 aa10.61□□□□□ -0.71
PRPF38A-202ENST00000474048 ZNF572Q7Z3I7 529 aaPredicted RBP10.61□□□□□ -0.71
PRPF38A-202ENST00000474048 DENND1CQ8IV53 801 aa10.61□□□□□ -0.71
PRPF38A-202ENST00000474048 CDKL3Q8IVW4 592 aaPredicted RBP10.61□□□□□ -0.71
PRPF38A-202ENST00000474048 PYROXD2Q8N2H3 581 aa10.61□□□□□ -0.71
PRPF38A-202ENST00000474048 RSAD2Q8WXG1 361 aa10.61□□□□□ -0.71
PRPF38A-202ENST00000474048 RAB17Q9H0T7 212 aa10.61□□□□□ -0.71
PRPF38A-202ENST00000474048 KIF9Q9HAQ2 790 aa10.61□□□□□ -0.71
PRPF38A-202ENST00000474048 IL21Q9HBE4 155 aa10.61□□□□□ -0.71
PRPF38A-202ENST00000474048 RBM12Q9NTZ6 932 aaKnown RBP10.61□□□□□ -0.71
PRPF38A-202ENST00000474048 CLDND1Q9NY35 253 aa10.61□□□□□ -0.71
PRPF38A-202ENST00000474048 CALCOCO1Q9P1Z2 691 aa10.61□□□□□ -0.71
PRPF38A-202ENST00000474048 DNMT3BQ9UBC3 853 aaKnown RBP10.61□□□□□ -0.71
PRPF38A-202ENST00000474048 ZNF148Q9UQR1 794 aa10.61□□□□□ -0.71
PRPF38A-202ENST00000474048 COLQQ9Y215 455 aaPredicted RBP10.61□□□□□ -0.71
PRPF38A-202ENST00000474048 UTP11Q9Y3A2 253 aaKnown RBP10.61□□□□□ -0.71
PRPF38A-202ENST00000474048 PDE4DIPQ5VU43 2346 aa10.61□□□□□ -0.71
PRPF38A-202ENST00000474048 HELZP42694 1942 aaKnown RBP10.6□□□□□ -0.71
PRPF38A-202ENST00000474048 DENND4CQ5VZ89 1909 aa10.6□□□□□ -0.71
PRPF38A-202ENST00000474048 E9PAM4 449 aa10.6□□□□□ -0.71
PRPF38A-202ENST00000474048 SGK1O00141 431 aa10.6□□□□□ -0.71
PRPF38A-202ENST00000474048 NDC80O14777 642 aa10.6□□□□□ -0.71
PRPF38A-202ENST00000474048 NCAM2O15394 837 aa10.6□□□□□ -0.71
PRPF38A-202ENST00000474048 ACSL4O60488 711 aa10.6□□□□□ -0.71
PRPF38A-202ENST00000474048 GJA1P17302 382 aa10.6□□□□□ -0.71
PRPF38A-202ENST00000474048 MX2P20592 715 aa10.6□□□□□ -0.71
PRPF38A-202ENST00000474048 TACR2P21452 398 aa10.6□□□□□ -0.71
PRPF38A-202ENST00000474048 EIF3EP60228 445 aaKnown RBP10.6□□□□□ -0.71
PRPF38A-202ENST00000474048 OTUD4Q01804 1114 aaKnown RBP10.6□□□□□ -0.71
PRPF38A-202ENST00000474048 HYAL1Q12794 435 aa10.6□□□□□ -0.71
PRPF38A-202ENST00000474048 BYSLQ13895 437 aaKnown RBP10.6□□□□□ -0.71
PRPF38A-202ENST00000474048 CCNG2Q16589 344 aa10.6□□□□□ -0.71
PRPF38A-202ENST00000474048 ATAT1Q5SQI0 421 aa10.6□□□□□ -0.71
PRPF38A-202ENST00000474048 PRPF38BQ5VTL8 546 aaKnown RBP10.6□□□□□ -0.71
PRPF38A-202ENST00000474048 TTC39BQ5VTQ0 682 aaPredicted RBP10.6□□□□□ -0.71
PRPF38A-202ENST00000474048 ANKRD54Q6NXT1 300 aa10.6□□□□□ -0.71
PRPF38A-202ENST00000474048 DARS2Q6PI48 645 aaKnown RBP10.6□□□□□ -0.71
PRPF38A-202ENST00000474048 CYP4V2Q6ZWL3 525 aaPredicted RBP10.6□□□□□ -0.71
PRPF38A-202ENST00000474048 GET4Q7L5D6 327 aaPredicted RBP10.6□□□□□ -0.71
PRPF38A-202ENST00000474048 CMTM8Q8IZV2 173 aa10.6□□□□□ -0.71
PRPF38A-202ENST00000474048 LGI2Q8N0V4 545 aa10.6□□□□□ -0.71
PRPF38A-202ENST00000474048 LZTR1Q8N653 840 aa10.6□□□□□ -0.71
PRPF38A-202ENST00000474048 C12orf76Q8N812 135 aaPredicted RBP10.6□□□□□ -0.71
PRPF38A-202ENST00000474048 CCDC89Q8N998 374 aa10.6□□□□□ -0.71
PRPF38A-202ENST00000474048 MYRIPQ8NFW9 859 aa10.6□□□□□ -0.71
PRPF38A-202ENST00000474048 VN1R2Q8NFZ6 395 aa10.6□□□□□ -0.71
PRPF38A-202ENST00000474048 SHKBP1Q8TBC3 707 aa10.6□□□□□ -0.71
PRPF38A-202ENST00000474048 CCHCR1Q8TD31 782 aa10.6□□□□□ -0.71
PRPF38A-202ENST00000474048 C1orf54Q8WWF1 131 aa10.6□□□□□ -0.71
PRPF38A-202ENST00000474048 ING5Q8WYH8 240 aa10.6□□□□□ -0.71
PRPF38A-202ENST00000474048 SLC39A13Q96H72 371 aa10.6□□□□□ -0.71
PRPF38A-202ENST00000474048 C1orf74Q96LT6 269 aa10.6□□□□□ -0.71
PRPF38A-202ENST00000474048 APOL5Q9BWW9 433 aa10.6□□□□□ -0.71
PRPF38A-202ENST00000474048 KLF16Q9BXK1 252 aaPredicted RBP10.6□□□□□ -0.71
PRPF38A-202ENST00000474048 ADAM33Q9BZ11 813 aa10.6□□□□□ -0.71
PRPF38A-202ENST00000474048 ZYG11BQ9C0D3 744 aa10.6□□□□□ -0.71
PRPF38A-202ENST00000474048 DDX47Q9H0S4 455 aaKnown RBP10.6□□□□□ -0.71
PRPF38A-202ENST00000474048 PRO3102Q9H379 93 aa10.6□□□□□ -0.71
PRPF38A-202ENST00000474048 HAUS2Q9NVX0 235 aa10.6□□□□□ -0.71
PRPF38A-202ENST00000474048 CWC15Q9P013 229 aaKnown RBP10.6□□□□□ -0.71
PRPF38A-202ENST00000474048 CFAP97Q9P2B7 532 aa10.6□□□□□ -0.71
PRPF38A-202ENST00000474048 VANGL2Q9ULK5 521 aa10.6□□□□□ -0.71
PRPF38A-202ENST00000474048 RAD54BQ9Y620 910 aa10.6□□□□□ -0.71
PRPF38A-202ENST00000474048 HS3ST4Q9Y661 456 aa10.6□□□□□ -0.71
PRPF38A-202ENST00000474048 UQCRHLA0A096LP55 91 aa10.59□□□□□ -0.71
PRPF38A-202ENST00000474048 CFAP69A5D8W1 941 aa10.59□□□□□ -0.71
PRPF38A-202ENST00000474048 C3orf70A6NLC5 250 aaPredicted RBP10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms