RNA–Protein interactions for RNA: ENST00000473924.1

DDX56-209, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-209ENST00000473924 NADSYN1Q6IA69 706 aa12.87□□□□□ -0.35
DDX56-209ENST00000473924 RFWD3Q6PCD5 774 aa12.87□□□□□ -0.35
DDX56-209ENST00000473924 NUDT18Q6ZVK8 323 aa12.87□□□□□ -0.35
DDX56-209ENST00000473924 STRADAQ7RTN6 431 aa12.87□□□□□ -0.35
DDX56-209ENST00000473924 C12orf40Q86WS4 652 aa12.87□□□□□ -0.35
DDX56-209ENST00000473924 FAM131BQ86XD5 332 aa12.87□□□□□ -0.35
DDX56-209ENST00000473924 CCDC105Q8IYK2 499 aa12.87□□□□□ -0.35
DDX56-209ENST00000473924 FAM172AQ8WUF8 416 aa12.87□□□□□ -0.35
DDX56-209ENST00000473924 PANX2Q96RD6 677 aa12.87□□□□□ -0.35
DDX56-209ENST00000473924 ADAM33Q9BZ11 813 aa12.87□□□□□ -0.35
DDX56-209ENST00000473924 TKTL2Q9H0I9 626 aa12.87□□□□□ -0.35
DDX56-209ENST00000473924 THAP2Q9H0W7 228 aa12.87□□□□□ -0.35
DDX56-209ENST00000473924 LMAN1LQ9HAT1 526 aa12.87□□□□□ -0.35
DDX56-209ENST00000473924 ARHGEF4Q9NR80 690 aa12.87□□□□□ -0.35
DDX56-209ENST00000473924 SPTLC3Q9NUV7 552 aa12.87□□□□□ -0.35
DDX56-209ENST00000473924 DNAJC17Q9NVM6 304 aaKnown RBP12.87□□□□□ -0.35
DDX56-209ENST00000473924 DEC1Q9P2X7 70 aa12.87□□□□□ -0.35
DDX56-209ENST00000473924 XPO7Q9UIA9 1087 aaKnown RBP12.87□□□□□ -0.35
DDX56-209ENST00000473924 MYOFQ9NZM1 2061 aa12.86□□□□□ -0.35
DDX56-209ENST00000473924 F5H5T6 163 aa12.86□□□□□ -0.35
DDX56-209ENST00000473924 CCP110O43303 1012 aa12.86□□□□□ -0.35
DDX56-209ENST00000473924 CACNG3O60359 315 aa12.86□□□□□ -0.35
DDX56-209ENST00000473924 TBL1XO60907 577 aa12.86□□□□□ -0.35
DDX56-209ENST00000473924 TULP3O75386 442 aa12.86□□□□□ -0.35
DDX56-209ENST00000473924 ENDOD1O94919 500 aa12.86□□□□□ -0.35
DDX56-209ENST00000473924 PENKP01210 267 aaPredicted RBP12.86□□□□□ -0.35
DDX56-209ENST00000473924 APODP05090 189 aa12.86□□□□□ -0.35
DDX56-209ENST00000473924 TACR2P21452 398 aa12.86□□□□□ -0.35
DDX56-209ENST00000473924 PSMA2P25787 234 aa12.86□□□□□ -0.35
DDX56-209ENST00000473924 AVPR2P30518 371 aa12.86□□□□□ -0.35
DDX56-209ENST00000473924 SLC6A4P31645 630 aa12.86□□□□□ -0.35
DDX56-209ENST00000473924 DGKGP49619 791 aa12.86□□□□□ -0.35
DDX56-209ENST00000473924 GALCP54803 685 aa12.86□□□□□ -0.35
DDX56-209ENST00000473924 ASTE1Q2TB18 679 aaPredicted RBP12.86□□□□□ -0.35
DDX56-209ENST00000473924 ARL13BQ3SXY8 428 aa12.86□□□□□ -0.35
DDX56-209ENST00000473924 MS4A13Q5J8X5 152 aa12.86□□□□□ -0.35
DDX56-209ENST00000473924 DGKKQ5KSL6 1271 aa12.86□□□□□ -0.35
DDX56-209ENST00000473924 SH3PXD2AQ5TCZ1 1133 aa12.86□□□□□ -0.35
DDX56-209ENST00000473924 PIK3R6Q5UE93 754 aa12.86□□□□□ -0.35
DDX56-209ENST00000473924 FYB2Q5VWT5 728 aa12.86□□□□□ -0.35
DDX56-209ENST00000473924 GRAMD4Q6IC98 578 aa12.86□□□□□ -0.35
DDX56-209ENST00000473924 FSTL4Q6MZW2 842 aa12.86□□□□□ -0.35
DDX56-209ENST00000473924 CCDC117Q8IWD4 279 aaPredicted RBP12.86□□□□□ -0.35
DDX56-209ENST00000473924 LGI2Q8N0V4 545 aa12.86□□□□□ -0.35
DDX56-209ENST00000473924 TMEM105Q8N8V8 129 aa12.86□□□□□ -0.35
DDX56-209ENST00000473924 HJURPQ8NCD3 748 aaPredicted RBP12.86□□□□□ -0.35
DDX56-209ENST00000473924 CTNNBL1Q8WYA6 563 aaPredicted RBP12.86□□□□□ -0.35
DDX56-209ENST00000473924 CNPY3Q9BT09 278 aa12.86□□□□□ -0.35
DDX56-209ENST00000473924 IRX2Q9BZI1 471 aaPredicted RBP12.86□□□□□ -0.35
DDX56-209ENST00000473924 SIK2Q9H0K1 926 aa12.86□□□□□ -0.35
DDX56-209ENST00000473924 GRPEL1Q9HAV7 217 aa12.86□□□□□ -0.35
DDX56-209ENST00000473924 FBRSL1Q9HCM7 1045 aaKnown RBP12.86□□□□□ -0.35
DDX56-209ENST00000473924 RBM12Q9NTZ6 932 aaKnown RBP12.86□□□□□ -0.35
DDX56-209ENST00000473924 ARHGEF38Q9NXL2 777 aa12.86□□□□□ -0.35
DDX56-209ENST00000473924 STIM2Q9P246 746 aa12.86□□□□□ -0.35
DDX56-209ENST00000473924 MIA3Q5JRA6 1907 aa12.86□□□□□ -0.35
DDX56-209ENST00000473924 TBC1D3BA6NDS4 549 aa12.85□□□□□ -0.35
DDX56-209ENST00000473924 TMEM191CA6NGB0 347 aa12.85□□□□□ -0.35
DDX56-209ENST00000473924 PAGE1O75459 146 aa12.85□□□□□ -0.35
DDX56-209ENST00000473924 RNF8O76064 485 aa12.85□□□□□ -0.35
DDX56-209ENST00000473924 KAT7O95251 611 aa12.85□□□□□ -0.35
DDX56-209ENST00000473924 EGFP01133 1207 aa12.85□□□□□ -0.35
DDX56-209ENST00000473924 H2AFZP0C0S5 128 aa12.85□□□□□ -0.35
DDX56-209ENST00000473924 CHRNB1P11230 501 aa12.85□□□□□ -0.35
DDX56-209ENST00000473924 CYLC1P35663 651 aaPredicted RBP12.85□□□□□ -0.35
DDX56-209ENST00000473924 GRIA2P42262 883 aa12.85□□□□□ -0.35
DDX56-209ENST00000473924 MAGEA9P43362 315 aa12.85□□□□□ -0.35
DDX56-209ENST00000473924 RABGAP1LQ5R372 815 aa12.85□□□□□ -0.35
DDX56-209ENST00000473924 SCYL2Q6P3W7 929 aa12.85□□□□□ -0.35
DDX56-209ENST00000473924 H2AFVQ71UI9 128 aa12.85□□□□□ -0.35
DDX56-209ENST00000473924 BNIPLQ7Z465 357 aa12.85□□□□□ -0.35
DDX56-209ENST00000473924 ETFBKMTQ8IXQ9 262 aa12.85□□□□□ -0.35
DDX56-209ENST00000473924 CCDC170Q8IYT3 715 aa12.85□□□□□ -0.35
DDX56-209ENST00000473924 CENPIQ92674 756 aaPredicted RBP12.85□□□□□ -0.35
DDX56-209ENST00000473924 NUP85Q9BW27 656 aa12.85□□□□□ -0.35
DDX56-209ENST00000473924 CTTNBP2NLQ9P2B4 639 aa12.85□□□□□ -0.35
DDX56-209ENST00000473924 NENFQ9UMX5 172 aa12.85□□□□□ -0.35
DDX56-209ENST00000473924 HS3ST4Q9Y661 456 aa12.85□□□□□ -0.35
DDX56-209ENST00000473924 F5P12259 2224 aa12.84□□□□□ -0.35
DDX56-209ENST00000473924 CYP1A2P05177 515 aa12.84□□□□□ -0.35
DDX56-209ENST00000473924 HOXD9P28356 352 aaPredicted RBP12.84□□□□□ -0.35
DDX56-209ENST00000473924 GGCXP38435 758 aa12.84□□□□□ -0.35
DDX56-209ENST00000473924 RPS9P46781 194 aaKnown RBP12.84□□□□□ -0.35
DDX56-209ENST00000473924 SGSHP51688 502 aa12.84□□□□□ -0.35
DDX56-209ENST00000473924 SEC13P55735 322 aa12.84□□□□□ -0.35
DDX56-209ENST00000473924 HDAC4P56524 1084 aa12.84□□□□□ -0.35
DDX56-209ENST00000473924 RPS24P62847 133 aaKnown RBP12.84□□□□□ -0.35
DDX56-209ENST00000473924 OGDHQ02218 1023 aa12.84□□□□□ -0.35
DDX56-209ENST00000473924 FZD5Q13467 585 aa12.84□□□□□ -0.35
DDX56-209ENST00000473924 AUHQ13825 339 aaKnown RBP12.84□□□□□ -0.35
DDX56-209ENST00000473924 CCINQ13939 588 aa12.84□□□□□ -0.35
DDX56-209ENST00000473924 SPA17Q15506 151 aa12.84□□□□□ -0.35
DDX56-209ENST00000473924 FBXO43Q4G163 708 aa12.84□□□□□ -0.35
DDX56-209ENST00000473924 RAB6CQ53S08 254 aa12.84□□□□□ -0.35
DDX56-209ENST00000473924 MPP7Q5T2T1 576 aa12.84□□□□□ -0.35
DDX56-209ENST00000473924 ACBD5Q5T8D3 534 aaPredicted RBP12.84□□□□□ -0.35
DDX56-209ENST00000473924 LRRC31Q6UY01 552 aa12.84□□□□□ -0.35
DDX56-209ENST00000473924 TMTC1Q8IUR5 882 aa12.84□□□□□ -0.35
DDX56-209ENST00000473924 MFN1Q8IWA4 741 aa12.84□□□□□ -0.35
DDX56-209ENST00000473924 ZNF687Q8N1G0 1237 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms