RNA–Protein interactions for RNA: ENST00000473643.1

SMG5-203, Transcript of SMG5, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG5, Length 541 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5-203ENST00000473643 YAF2Q8IY57 180 aa9.45□□□□□ -0.9
SMG5-203ENST00000473643 MAML2Q8IZL2 1156 aaPredicted RBP9.45□□□□□ -0.9
SMG5-203ENST00000473643 C17orf53Q8N3J3 647 aaPredicted RBP9.45□□□□□ -0.9
SMG5-203ENST00000473643 CELF5Q8N6W0 485 aaKnown RBP9.45□□□□□ -0.9
SMG5-203ENST00000473643 FAM172AQ8WUF8 416 aa9.45□□□□□ -0.9
SMG5-203ENST00000473643 CD101Q93033 1021 aa9.45□□□□□ -0.9
SMG5-203ENST00000473643 AZIN2Q96A70 460 aa9.45□□□□□ -0.9
SMG5-203ENST00000473643 NTAN1Q96AB6 310 aa9.45□□□□□ -0.9
SMG5-203ENST00000473643 ZFRQ96KR1 1074 aaKnown RBP9.45□□□□□ -0.9
SMG5-203ENST00000473643 ALS2CR12Q96Q35 445 aa9.45□□□□□ -0.9
SMG5-203ENST00000473643 KLF16Q9BXK1 252 aaPredicted RBP9.45□□□□□ -0.9
SMG5-203ENST00000473643 IRX2Q9BZI1 471 aaPredicted RBP9.45□□□□□ -0.9
SMG5-203ENST00000473643 FAM86C1Q9NVL1 165 aa9.45□□□□□ -0.9
SMG5-203ENST00000473643 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.45□□□□□ -0.9
SMG5-203ENST00000473643 MARCH2Q9P0N8 246 aa9.45□□□□□ -0.9
SMG5-203ENST00000473643 CALCOCO1Q9P1Z2 691 aa9.45□□□□□ -0.9
SMG5-203ENST00000473643 NUDT5Q9UKK9 219 aa9.45□□□□□ -0.9
SMG5-203ENST00000473643 ARHGAP26Q9UNA1 814 aa9.45□□□□□ -0.9
SMG5-203ENST00000473643 TLR6Q9Y2C9 796 aa9.45□□□□□ -0.9
SMG5-203ENST00000473643 MRPS17Q9Y2R5 130 aaKnown RBP9.45□□□□□ -0.9
SMG5-203ENST00000473643 KCNU1A8MYU2 1149 aa9.44□□□□□ -0.9
SMG5-203ENST00000473643 NCAM2O15394 837 aa9.44□□□□□ -0.9
SMG5-203ENST00000473643 TUBB4AP04350 444 aa9.44□□□□□ -0.9
SMG5-203ENST00000473643 SLC2A3P11169 496 aa9.44□□□□□ -0.9
SMG5-203ENST00000473643 MSNP26038 577 aaKnown RBP9.44□□□□□ -0.9
SMG5-203ENST00000473643 TARSP26639 723 aaKnown RBP9.44□□□□□ -0.9
SMG5-203ENST00000473643 MIPP30301 263 aa9.44□□□□□ -0.9
SMG5-203ENST00000473643 CCR1P32246 355 aa9.44□□□□□ -0.9
SMG5-203ENST00000473643 AVPR1AP37288 418 aa9.44□□□□□ -0.9
SMG5-203ENST00000473643 MAGEA9P43362 315 aa9.44□□□□□ -0.9
SMG5-203ENST00000473643 AIF1P55008 147 aa9.44□□□□□ -0.9
SMG5-203ENST00000473643 TBX4P57082 545 aa9.44□□□□□ -0.9
SMG5-203ENST00000473643 SLC25A11Q02978 314 aaKnown RBP9.44□□□□□ -0.9
SMG5-203ENST00000473643 DEUP1Q05D60 604 aa9.44□□□□□ -0.9
SMG5-203ENST00000473643 SCAPQ12770 1279 aa9.44□□□□□ -0.9
SMG5-203ENST00000473643 UBXN2BQ14CS0 331 aa9.44□□□□□ -0.9
SMG5-203ENST00000473643 RAB6CQ53S08 254 aa9.44□□□□□ -0.9
SMG5-203ENST00000473643 BOLA3Q53S33 107 aa9.44□□□□□ -0.9
SMG5-203ENST00000473643 BRMS1LQ5PSV4 323 aa9.44□□□□□ -0.9
SMG5-203ENST00000473643 NYAP1Q6ZVC0 841 aa9.44□□□□□ -0.9
SMG5-203ENST00000473643 POLNQ7Z5Q5 900 aa9.44□□□□□ -0.9
SMG5-203ENST00000473643 NT5DC3Q86UY8 548 aa9.44□□□□□ -0.9
SMG5-203ENST00000473643 PSTKQ8IV42 348 aaKnown RBP9.44□□□□□ -0.9
SMG5-203ENST00000473643 KIAA1958Q8N8K9 716 aa9.44□□□□□ -0.9
SMG5-203ENST00000473643 ARL14EPQ8N8R7 260 aaPredicted RBP9.44□□□□□ -0.9
SMG5-203ENST00000473643 MAB21L3Q8N8X9 362 aa9.44□□□□□ -0.9
SMG5-203ENST00000473643 ADAM32Q8TC27 787 aa9.44□□□□□ -0.9
SMG5-203ENST00000473643 BPIFB1Q8TDL5 484 aa9.44□□□□□ -0.9
SMG5-203ENST00000473643 FAM3CQ92520 227 aa9.44□□□□□ -0.9
SMG5-203ENST00000473643 USP13Q92995 863 aaPredicted RBP9.44□□□□□ -0.9
SMG5-203ENST00000473643 MSANTD3Q96H12 275 aa9.44□□□□□ -0.9
SMG5-203ENST00000473643 FCRL2Q96LA5 508 aaPredicted RBP9.44□□□□□ -0.9
SMG5-203ENST00000473643 SLC22A12Q96S37 553 aa9.44□□□□□ -0.9
SMG5-203ENST00000473643 CYP2S1Q96SQ9 504 aa9.44□□□□□ -0.9
SMG5-203ENST00000473643 FAM83CQ9BQN1 747 aa9.44□□□□□ -0.9
SMG5-203ENST00000473643 RAB6CQ9H0N0 254 aa9.44□□□□□ -0.9
SMG5-203ENST00000473643 SMG9Q9H0W8 520 aaKnown RBP9.44□□□□□ -0.9
SMG5-203ENST00000473643 WDCPQ9H6R7 721 aa9.44□□□□□ -0.9
SMG5-203ENST00000473643 C8orf33Q9H7E9 229 aaPredicted RBP9.44□□□□□ -0.9
SMG5-203ENST00000473643 FAM204AQ9H8W3 233 aa9.44□□□□□ -0.9
SMG5-203ENST00000473643 PIGVQ9NUD9 493 aa9.44□□□□□ -0.9
SMG5-203ENST00000473643 TDP1Q9NUW8 608 aa9.44□□□□□ -0.9
SMG5-203ENST00000473643 DDIT4Q9NX09 232 aa9.44□□□□□ -0.9
SMG5-203ENST00000473643 ARHGEF38Q9NXL2 777 aa9.44□□□□□ -0.9
SMG5-203ENST00000473643 SFMBT1Q9UHJ3 866 aa9.44□□□□□ -0.9
SMG5-203ENST00000473643 RASAL2Q9UJF2 1139 aa9.44□□□□□ -0.9
SMG5-203ENST00000473643 USP18Q9UMW8 372 aa9.44□□□□□ -0.9
SMG5-203ENST00000473643 CCL26Q9Y258 94 aa9.44□□□□□ -0.9
SMG5-203ENST00000473643 PIAS3Q9Y6X2 628 aa9.44□□□□□ -0.9
SMG5-203ENST00000473643 GREB1Q4ZG55 1949 aa9.44□□□□□ -0.9
SMG5-203ENST00000473643 CACNA1IQ9P0X4 2223 aa9.43□□□□□ -0.9
SMG5-203ENST00000473643 SLC12A8A0AV02 714 aa9.43□□□□□ -0.9
SMG5-203ENST00000473643 MIF4GDA9UHW6 222 aaKnown RBP9.43□□□□□ -0.9
SMG5-203ENST00000473643 MDM4O15151 490 aa9.43□□□□□ -0.9
SMG5-203ENST00000473643 GREM1O60565 184 aa9.43□□□□□ -0.9
SMG5-203ENST00000473643 LATS1O95835 1130 aa9.43□□□□□ -0.9
SMG5-203ENST00000473643 CKMP06732 381 aa9.43□□□□□ -0.9
SMG5-203ENST00000473643 KRT7P08729 469 aa9.43□□□□□ -0.9
SMG5-203ENST00000473643 CTNNA2P26232 953 aa9.43□□□□□ -0.9
SMG5-203ENST00000473643 IL1R2P27930 398 aa9.43□□□□□ -0.9
SMG5-203ENST00000473643 ADRA1BP35368 520 aa9.43□□□□□ -0.9
SMG5-203ENST00000473643 PEX5P50542 639 aa9.43□□□□□ -0.9
SMG5-203ENST00000473643 ATXN1P54253 815 aaKnown RBP9.43□□□□□ -0.9
SMG5-203ENST00000473643 TAS2R40P59535 323 aa9.43□□□□□ -0.9
SMG5-203ENST00000473643 GNG11P61952 73 aa9.43□□□□□ -0.9
SMG5-203ENST00000473643 ETF1P62495 437 aaKnown RBP9.43□□□□□ -0.9
SMG5-203ENST00000473643 ZXDBP98169 803 aa9.43□□□□□ -0.9
SMG5-203ENST00000473643 NME3Q13232 169 aa9.43□□□□□ -0.9
SMG5-203ENST00000473643 HADHQ16836 314 aaKnown RBP9.43□□□□□ -0.9
SMG5-203ENST00000473643 CDO1Q16878 200 aa9.43□□□□□ -0.9
SMG5-203ENST00000473643 ZC3H12AQ5D1E8 599 aaKnown RBP9.43□□□□□ -0.9
SMG5-203ENST00000473643 ZNF569Q5MCW4 686 aa9.43□□□□□ -0.9
SMG5-203ENST00000473643 ACBD5Q5T8D3 534 aaPredicted RBP9.43□□□□□ -0.9
SMG5-203ENST00000473643 MEI1Q5TIA1 1274 aa9.43□□□□□ -0.9
SMG5-203ENST00000473643 C1orf228Q6PIY5 440 aa9.43□□□□□ -0.9
SMG5-203ENST00000473643 CYP4V2Q6ZWL3 525 aaPredicted RBP9.43□□□□□ -0.9
SMG5-203ENST00000473643 SND1Q7KZF4 910 aaKnown RBP eCLIP9.43□□□□□ -0.9
SMG5-203ENST00000473643 PEX26Q7Z412 305 aa9.43□□□□□ -0.9
SMG5-203ENST00000473643 CPNE8Q86YQ8 564 aa9.43□□□□□ -0.9
SMG5-203ENST00000473643 MIB1Q86YT6 1006 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms