RNA–Protein interactions for RNA: ENST00000473494.6

SEC22A-204, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

TSL 3

Gene SEC22A, Length 1,011 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-204ENST00000473494 PDE8BO95263 885 aa6.96□□□□□ -1.3
SEC22A-204ENST00000473494 CYP3A7P24462 503 aa6.96□□□□□ -1.3
SEC22A-204ENST00000473494 NDUFS1P28331 727 aa6.96□□□□□ -1.3
SEC22A-204ENST00000473494 PNPLA4P41247 253 aa6.96□□□□□ -1.3
SEC22A-204ENST00000473494 CYP4F2P78329 520 aa6.96□□□□□ -1.3
SEC22A-204ENST00000473494 SIM1P81133 766 aaPredicted RBP6.96□□□□□ -1.3
SEC22A-204ENST00000473494 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.96□□□□□ -1.3
SEC22A-204ENST00000473494 MAPK7Q13164 816 aa6.96□□□□□ -1.3
SEC22A-204ENST00000473494 PCID2Q5JVF3 399 aa6.96□□□□□ -1.3
SEC22A-204ENST00000473494 ANO7Q6IWH7 933 aa6.96□□□□□ -1.3
SEC22A-204ENST00000473494 TMED8Q6PL24 325 aaPredicted RBP6.96□□□□□ -1.3
SEC22A-204ENST00000473494 BCDIN3DQ7Z5W3 292 aaKnown RBP6.96□□□□□ -1.3
SEC22A-204ENST00000473494 LAS2Q8IYD9 372 aa6.96□□□□□ -1.3
SEC22A-204ENST00000473494 PCYOX1LQ8NBM8 494 aa6.96□□□□□ -1.3
SEC22A-204ENST00000473494 MAFAQ8NHW3 353 aaPredicted RBP6.96□□□□□ -1.3
SEC22A-204ENST00000473494 LARP4BQ92615 738 aaKnown RBP6.96□□□□□ -1.3
SEC22A-204ENST00000473494 HERC2P3Q9BVR0 1158 aa6.96□□□□□ -1.3
SEC22A-204ENST00000473494 ELOVL1Q9BW60 279 aa6.96□□□□□ -1.3
SEC22A-204ENST00000473494 PRDM16Q9HAZ2 1276 aa6.96□□□□□ -1.3
SEC22A-204ENST00000473494 ALG13Q9NP73 1137 aaKnown RBP6.96□□□□□ -1.3
SEC22A-204ENST00000473494 ASIC5Q9NY37 505 aa6.96□□□□□ -1.3
SEC22A-204ENST00000473494 SLC12A4Q9UP95 1085 aa6.96□□□□□ -1.3
SEC22A-204ENST00000473494 AFG3L2Q9Y4W6 797 aa6.96□□□□□ -1.3
SEC22A-204ENST00000473494 COPG1Q9Y678 874 aaKnown RBP6.96□□□□□ -1.3
SEC22A-204ENST00000473494 SPATA31A1Q5TZJ5 1347 aa6.96□□□□□ -1.3
SEC22A-204ENST00000473494 KRTAP9-6A0A140TA67 174 aa6.95□□□□□ -1.3
SEC22A-204ENST00000473494 H3BNC9 293 aa6.95□□□□□ -1.3
SEC22A-204ENST00000473494 H7C1Q1 480 aa6.95□□□□□ -1.3
SEC22A-204ENST00000473494 MGST3O14880 152 aa6.95□□□□□ -1.3
SEC22A-204ENST00000473494 C1RP00736 705 aa6.95□□□□□ -1.3
SEC22A-204ENST00000473494 ACP5P13686 325 aa6.95□□□□□ -1.3
SEC22A-204ENST00000473494 KRT4P19013 534 aa6.95□□□□□ -1.3
SEC22A-204ENST00000473494 SLC8A1P32418 973 aa6.95□□□□□ -1.3
SEC22A-204ENST00000473494 PCP4P48539 62 aa6.95□□□□□ -1.3
SEC22A-204ENST00000473494 GEMIN4P57678 1058 aaKnown RBP6.95□□□□□ -1.3
SEC22A-204ENST00000473494 WDR5P61964 334 aaKnown RBP6.95□□□□□ -1.3
SEC22A-204ENST00000473494 ABHD18Q0P651 414 aa6.95□□□□□ -1.3
SEC22A-204ENST00000473494 G3BP1Q13283 466 aaKnown RBP eCLIP6.95□□□□□ -1.3
SEC22A-204ENST00000473494 THOC5Q13769 683 aaKnown RBP6.95□□□□□ -1.3
SEC22A-204ENST00000473494 KYAT3Q6YP21 454 aaKnown RBP6.95□□□□□ -1.3
SEC22A-204ENST00000473494 SYNE3Q6ZMZ3 975 aa6.95□□□□□ -1.3
SEC22A-204ENST00000473494 ZNF627Q7L945 461 aa6.95□□□□□ -1.3
SEC22A-204ENST00000473494 SLC29A4Q7RTT9 530 aa6.95□□□□□ -1.3
SEC22A-204ENST00000473494 GRASPQ7Z6J2 395 aaPredicted RBP6.95□□□□□ -1.3
SEC22A-204ENST00000473494 TERB1Q8NA31 727 aa6.95□□□□□ -1.3
SEC22A-204ENST00000473494 CLEC4CQ8WTT0 213 aa6.95□□□□□ -1.3
SEC22A-204ENST00000473494 SKA1Q96BD8 255 aa6.95□□□□□ -1.3
SEC22A-204ENST00000473494 SLC26A6Q9BXS9 759 aa6.95□□□□□ -1.3
SEC22A-204ENST00000473494 MYRFQ9Y2G1 1151 aa6.95□□□□□ -1.3
SEC22A-204ENST00000473494 PCDHA10Q9Y5I2 948 aa6.95□□□□□ -1.3
SEC22A-204ENST00000473494 HNRNPA1P09651 372 aaKnown RBP eCLIP6.94□□□□□ -1.3
SEC22A-204ENST00000473494 FAM163BP0C2L3 166 aa6.94□□□□□ -1.3
SEC22A-204ENST00000473494 CHN1P15882 459 aa6.94□□□□□ -1.3
SEC22A-204ENST00000473494 TUBP50607 506 aa6.94□□□□□ -1.3
SEC22A-204ENST00000473494 LARS2Q15031 903 aaKnown RBP6.94□□□□□ -1.3
SEC22A-204ENST00000473494 ERCC6LQ2NKX8 1250 aa6.94□□□□□ -1.3
SEC22A-204ENST00000473494 LCE4AQ5TA78 99 aa6.94□□□□□ -1.3
SEC22A-204ENST00000473494 TMEM88Q6PEY1 159 aa6.94□□□□□ -1.3
SEC22A-204ENST00000473494 LINS1Q8NG48 757 aa6.94□□□□□ -1.3
SEC22A-204ENST00000473494 AKAP1Q92667 903 aaKnown RBP eCLIP6.94□□□□□ -1.3
SEC22A-204ENST00000473494 ARRDC3Q96B67 414 aa6.94□□□□□ -1.3
SEC22A-204ENST00000473494 PRRX2Q99811 253 aa6.94□□□□□ -1.3
SEC22A-204ENST00000473494 MACROD1Q9BQ69 325 aa6.94□□□□□ -1.3
SEC22A-204ENST00000473494 SENP7Q9BQF6 1050 aa6.94□□□□□ -1.3
SEC22A-204ENST00000473494 AGXT2Q9BYV1 514 aa6.94□□□□□ -1.3
SEC22A-204ENST00000473494 ZHX3Q9H4I2 956 aa6.94□□□□□ -1.3
SEC22A-204ENST00000473494 SYNPO2LQ9H987 977 aa6.94□□□□□ -1.3
SEC22A-204ENST00000473494 RMI1Q9H9A7 625 aa6.94□□□□□ -1.3
SEC22A-204ENST00000473494 JMJD4Q9H9V9 463 aa6.94□□□□□ -1.3
SEC22A-204ENST00000473494 PDE11AQ9HCR9 933 aa6.94□□□□□ -1.3
SEC22A-204ENST00000473494 TBX20Q9UMR3 447 aa6.94□□□□□ -1.3
SEC22A-204ENST00000473494 VPS4AQ9UN37 437 aa6.94□□□□□ -1.3
SEC22A-204ENST00000473494 GDAQ9Y2T3 454 aa6.94□□□□□ -1.3
SEC22A-204ENST00000473494 TTBK1Q5TCY1 1321 aaPredicted RBP6.94□□□□□ -1.3
SEC22A-204ENST00000473494 GRM8O00222 908 aa6.93□□□□□ -1.3
SEC22A-204ENST00000473494 MBD4O95243 580 aa6.93□□□□□ -1.3
SEC22A-204ENST00000473494 MT-CO3P00414 261 aa6.93□□□□□ -1.3
SEC22A-204ENST00000473494 PEPDP12955 493 aa6.93□□□□□ -1.3
SEC22A-204ENST00000473494 ATF7P17544 494 aaPredicted RBP6.93□□□□□ -1.3
SEC22A-204ENST00000473494 TNFAIP3P21580 790 aa6.93□□□□□ -1.3
SEC22A-204ENST00000473494 CXCR5P32302 372 aa6.93□□□□□ -1.3
SEC22A-204ENST00000473494 ELF1P32519 619 aa6.93□□□□□ -1.3
SEC22A-204ENST00000473494 PSMC2P35998 433 aaKnown RBP6.93□□□□□ -1.3
SEC22A-204ENST00000473494 RARRES1P49788 294 aa6.93□□□□□ -1.3
SEC22A-204ENST00000473494 LRRC24Q50LG9 513 aa6.93□□□□□ -1.3
SEC22A-204ENST00000473494 CEP85Q6P2H3 762 aa6.93□□□□□ -1.3
SEC22A-204ENST00000473494 SLC39A5Q6ZMH5 540 aa6.93□□□□□ -1.3
SEC22A-204ENST00000473494 RSRC2Q7L4I2 434 aaKnown RBP6.93□□□□□ -1.3
SEC22A-204ENST00000473494 MAATS1Q7Z4T9 603 aa6.93□□□□□ -1.3
SEC22A-204ENST00000473494 TSPYL6Q8N831 410 aa6.93□□□□□ -1.3
SEC22A-204ENST00000473494 DAZAP1Q96EP5 407 aaKnown RBP6.93□□□□□ -1.3
SEC22A-204ENST00000473494 HIC2Q96JB3 615 aa6.93□□□□□ -1.3
SEC22A-204ENST00000473494 HTATIP2Q9BUP3 242 aa6.93□□□□□ -1.3
SEC22A-204ENST00000473494 SLC22A11Q9NSA0 550 aa6.93□□□□□ -1.3
SEC22A-204ENST00000473494 ST3GAL5Q9UNP4 418 aa6.93□□□□□ -1.3
SEC22A-204ENST00000473494 TMEM191CA6NGB0 347 aa6.92□□□□□ -1.3
SEC22A-204ENST00000473494 KRTAP9-7A8MTY7 169 aa6.92□□□□□ -1.3
SEC22A-204ENST00000473494 PRYO14603 147 aa6.92□□□□□ -1.3
SEC22A-204ENST00000473494 FYB1O15117 783 aa6.92□□□□□ -1.3
SEC22A-204ENST00000473494 KLK10O43240 276 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms