RNA–Protein interactions for RNA: ENST00000473345.5

MCF2L-223, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 399 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-223ENST00000473345 DDI1Q8WTU0 396 aa10.05□□□□□ -0.8
MCF2L-223ENST00000473345 EDEM1Q92611 657 aa10.05□□□□□ -0.8
MCF2L-223ENST00000473345 TATDN2Q93075 761 aa10.05□□□□□ -0.8
MCF2L-223ENST00000473345 IGSF8Q969P0 613 aa10.05□□□□□ -0.8
MCF2L-223ENST00000473345 EEF2KMTQ96G04 330 aa10.05□□□□□ -0.8
MCF2L-223ENST00000473345 MRGPRX3Q96LB0 322 aa10.05□□□□□ -0.8
MCF2L-223ENST00000473345 PRICKLE1Q96MT3 831 aaPredicted RBP10.05□□□□□ -0.8
MCF2L-223ENST00000473345 CDC6Q99741 560 aa10.05□□□□□ -0.8
MCF2L-223ENST00000473345 ZSWIM1Q9BR11 485 aa10.05□□□□□ -0.8
MCF2L-223ENST00000473345 NIF3L1Q9GZT8 377 aa10.05□□□□□ -0.8
MCF2L-223ENST00000473345 MMRN2Q9H8L6 949 aa10.05□□□□□ -0.8
MCF2L-223ENST00000473345 OSGEPQ9NPF4 335 aa10.05□□□□□ -0.8
MCF2L-223ENST00000473345 CGNQ9P2M7 1197 aaKnown RBP10.05□□□□□ -0.8
MCF2L-223ENST00000473345 ASXL3Q9C0F0 2248 aa10.05□□□□□ -0.8
MCF2L-223ENST00000473345 KNL1Q8NG31 2342 aa10.04□□□□□ -0.8
MCF2L-223ENST00000473345 A0A1W2PR77 199 aa10.04□□□□□ -0.8
MCF2L-223ENST00000473345 YJEFN3A6XGL0 299 aa10.04□□□□□ -0.8
MCF2L-223ENST00000473345 E7ENQ6 273 aa10.04□□□□□ -0.8
MCF2L-223ENST00000473345 NPC1O15118 1278 aa10.04□□□□□ -0.8
MCF2L-223ENST00000473345 PAPSS1O43252 624 aaPredicted RBP10.04□□□□□ -0.8
MCF2L-223ENST00000473345 YEATS4O95619 227 aa10.04□□□□□ -0.8
MCF2L-223ENST00000473345 RALAP11233 206 aa10.04□□□□□ -0.8
MCF2L-223ENST00000473345 ACADMP11310 421 aa10.04□□□□□ -0.8
MCF2L-223ENST00000473345 CD27P26842 260 aa10.04□□□□□ -0.8
MCF2L-223ENST00000473345 CHKAP35790 457 aa10.04□□□□□ -0.8
MCF2L-223ENST00000473345 CTSOP43234 321 aaPredicted RBP10.04□□□□□ -0.8
MCF2L-223ENST00000473345 GRK6P43250 576 aa10.04□□□□□ -0.8
MCF2L-223ENST00000473345 ACADVLP49748 655 aa10.04□□□□□ -0.8
MCF2L-223ENST00000473345 NUMBP49757 651 aa10.04□□□□□ -0.8
MCF2L-223ENST00000473345 TKTL1P51854 596 aa10.04□□□□□ -0.8
MCF2L-223ENST00000473345 ZNF132P52740 706 aa10.04□□□□□ -0.8
MCF2L-223ENST00000473345 GALCP54803 685 aa10.04□□□□□ -0.8
MCF2L-223ENST00000473345 MCCD1P59942 119 aaPredicted RBP10.04□□□□□ -0.8
MCF2L-223ENST00000473345 COG7P83436 770 aa10.04□□□□□ -0.8
MCF2L-223ENST00000473345 AMPD3Q01432 767 aa10.04□□□□□ -0.8
MCF2L-223ENST00000473345 GOLGA8FQ08AF8 430 aa10.04□□□□□ -0.8
MCF2L-223ENST00000473345 GOLGA8DPQ0D2H9 430 aa10.04□□□□□ -0.8
MCF2L-223ENST00000473345 BNIP3Q12983 259 aa10.04□□□□□ -0.8
MCF2L-223ENST00000473345 FAM133BQ5BKY9 247 aaKnown RBP10.04□□□□□ -0.8
MCF2L-223ENST00000473345 MBLAC2Q68D91 279 aa10.04□□□□□ -0.8
MCF2L-223ENST00000473345 PM20D1Q6GTS8 502 aa10.04□□□□□ -0.8
MCF2L-223ENST00000473345 MMS22LQ6ZRQ5 1243 aa10.04□□□□□ -0.8
MCF2L-223ENST00000473345 PDCD7Q8N8D1 485 aaKnown RBP10.04□□□□□ -0.8
MCF2L-223ENST00000473345 SAP25Q8TEE9 199 aa10.04□□□□□ -0.8
MCF2L-223ENST00000473345 TSC1Q92574 1164 aa10.04□□□□□ -0.8
MCF2L-223ENST00000473345 TAF4BQ92750 862 aa10.04□□□□□ -0.8
MCF2L-223ENST00000473345 LRRC27Q9C0I9 530 aa10.04□□□□□ -0.8
MCF2L-223ENST00000473345 PCED1AQ9H1Q7 454 aa10.04□□□□□ -0.8
MCF2L-223ENST00000473345 ZSCAN16Q9H4T2 348 aaPredicted RBP10.04□□□□□ -0.8
MCF2L-223ENST00000473345 CYP3A43Q9HB55 503 aa10.04□□□□□ -0.8
MCF2L-223ENST00000473345 GGA2Q9UJY4 613 aa10.04□□□□□ -0.8
MCF2L-223ENST00000473345 STOML2Q9UJZ1 356 aa10.04□□□□□ -0.8
MCF2L-223ENST00000473345 MAPK8IP1Q9UQF2 711 aa10.04□□□□□ -0.8
MCF2L-223ENST00000473345 COL5A1P20908 1838 aaPredicted RBP10.03□□□□□ -0.8
MCF2L-223ENST00000473345 MYH10P35580 1976 aa10.03□□□□□ -0.8
MCF2L-223ENST00000473345 PDXKO00764 312 aa10.03□□□□□ -0.8
MCF2L-223ENST00000473345 IKBKBO14920 756 aa10.03□□□□□ -0.8
MCF2L-223ENST00000473345 MID1O15344 667 aa10.03□□□□□ -0.8
MCF2L-223ENST00000473345 SIN3BO75182 1162 aa10.03□□□□□ -0.8
MCF2L-223ENST00000473345 IGLV3-27P01718 113 aa10.03□□□□□ -0.8
MCF2L-223ENST00000473345 PABPC1P11940 636 aaKnown RBP10.03□□□□□ -0.8
MCF2L-223ENST00000473345 PDIA4P13667 645 aaKnown RBP10.03□□□□□ -0.8
MCF2L-223ENST00000473345 PLA2G2AP14555 144 aa10.03□□□□□ -0.8
MCF2L-223ENST00000473345 ABCG1P45844 678 aa10.03□□□□□ -0.8
MCF2L-223ENST00000473345 PSEN1P49768 467 aa10.03□□□□□ -0.8
MCF2L-223ENST00000473345 CCT8P50990 548 aa10.03□□□□□ -0.8
MCF2L-223ENST00000473345 PPP2CBP62714 309 aa10.03□□□□□ -0.8
MCF2L-223ENST00000473345 PPP2CAP67775 309 aa10.03□□□□□ -0.8
MCF2L-223ENST00000473345 PDE4CQ08493 712 aa10.03□□□□□ -0.8
MCF2L-223ENST00000473345 TARDBPQ13148 414 aaKnown RBP eCLIP10.03□□□□□ -0.8
MCF2L-223ENST00000473345 FNDC3BQ53EP0 1204 aaKnown RBP10.03□□□□□ -0.8
MCF2L-223ENST00000473345 FSCBQ5H9T9 825 aa10.03□□□□□ -0.8
MCF2L-223ENST00000473345 ARHGAP17Q68EM7 881 aa10.03□□□□□ -0.8
MCF2L-223ENST00000473345 KIAA0895LQ68EN5 471 aa10.03□□□□□ -0.8
MCF2L-223ENST00000473345 FBXL19Q6PCT2 694 aa10.03□□□□□ -0.8
MCF2L-223ENST00000473345 NCEH1Q6PIU2 408 aa10.03□□□□□ -0.8
MCF2L-223ENST00000473345 SPATS2Q86XZ4 545 aaKnown RBP10.03□□□□□ -0.8
MCF2L-223ENST00000473345 GALNT15Q8N3T1 639 aa10.03□□□□□ -0.8
MCF2L-223ENST00000473345 ZNF843Q8N446 348 aa10.03□□□□□ -0.8
MCF2L-223ENST00000473345 AADATQ8N5Z0 425 aa10.03□□□□□ -0.8
MCF2L-223ENST00000473345 CLEC4CQ8WTT0 213 aa10.03□□□□□ -0.8
MCF2L-223ENST00000473345 UCMAQ8WVF2 138 aa10.03□□□□□ -0.8
MCF2L-223ENST00000473345 SLC39A7Q92504 469 aa10.03□□□□□ -0.8
MCF2L-223ENST00000473345 INTS4Q96HW7 963 aaKnown RBP10.03□□□□□ -0.8
MCF2L-223ENST00000473345 HEXIM2Q96MH2 286 aaKnown RBP10.03□□□□□ -0.8
MCF2L-223ENST00000473345 SLC2A11Q9BYW1 496 aa10.03□□□□□ -0.8
MCF2L-223ENST00000473345 BTBD1Q9H0C5 482 aa10.03□□□□□ -0.8
MCF2L-223ENST00000473345 RSPH9Q9H1X1 276 aaPredicted RBP10.03□□□□□ -0.8
MCF2L-223ENST00000473345 NEUROG2Q9H2A3 272 aa10.03□□□□□ -0.8
MCF2L-223ENST00000473345 CISHQ9NSE2 258 aa10.03□□□□□ -0.8
MCF2L-223ENST00000473345 TRAF3IP3Q9Y228 551 aa10.03□□□□□ -0.8
MCF2L-223ENST00000473345 ZNF510Q9Y2H8 683 aa10.03□□□□□ -0.8
MCF2L-223ENST00000473345 CABIN1Q9Y6J0 2220 aa10.02□□□□□ -0.81
MCF2L-223ENST00000473345 HELZ2Q9BYK8 2649 aaKnown RBP10.02□□□□□ -0.81
MCF2L-223ENST00000473345 A0A1W2PP55 124 aa10.02□□□□□ -0.81
MCF2L-223ENST00000473345 A0A1W2PPC4 97 aa10.02□□□□□ -0.81
MCF2L-223ENST00000473345 FAM47DPA6NHR8 397 aa10.02□□□□□ -0.81
MCF2L-223ENST00000473345 PYCARD-AS1I3L0S3 204 aa10.02□□□□□ -0.81
MCF2L-223ENST00000473345 PIK3R2O00459 728 aa10.02□□□□□ -0.81
MCF2L-223ENST00000473345 ENC1O14682 589 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms