RNA–Protein interactions for RNA: ENST00000473344.1

CKS1B-205, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 390 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-205ENST00000473344 SLC27A6Q9Y2P4 619 aa7.26□□□□□ -1.25
CKS1B-205ENST00000473344 RAXQ9Y2V3 346 aa7.26□□□□□ -1.25
CKS1B-205ENST00000473344 ANKRD11Q6UB99 2663 aaPredicted RBP7.26□□□□□ -1.25
CKS1B-205ENST00000473344 TNRC6BQ9UPQ9 1833 aaKnown RBP7.26□□□□□ -1.25
CKS1B-205ENST00000473344 PVALEFA0A1B0GWK0 134 aa7.25□□□□□ -1.25
CKS1B-205ENST00000473344 METTL12A8MUP2 240 aa7.25□□□□□ -1.25
CKS1B-205ENST00000473344 KCNJ18B7U540 433 aa7.25□□□□□ -1.25
CKS1B-205ENST00000473344 CUTAO60888 179 aa7.25□□□□□ -1.25
CKS1B-205ENST00000473344 CBFA2T3O75081 653 aa7.25□□□□□ -1.25
CKS1B-205ENST00000473344 STC2O76061 302 aa7.25□□□□□ -1.25
CKS1B-205ENST00000473344 VNN1O95497 513 aa7.25□□□□□ -1.25
CKS1B-205ENST00000473344 HMBSP08397 361 aa7.25□□□□□ -1.25
CKS1B-205ENST00000473344 CASP1P29466 404 aa7.25□□□□□ -1.25
CKS1B-205ENST00000473344 CORO1AP31146 461 aaKnown RBP7.25□□□□□ -1.25
CKS1B-205ENST00000473344 AFMP43652 599 aa7.25□□□□□ -1.25
CKS1B-205ENST00000473344 MFAP3P55082 362 aa7.25□□□□□ -1.25
CKS1B-205ENST00000473344 SLC8A3P57103 927 aa7.25□□□□□ -1.25
CKS1B-205ENST00000473344 DLG4P78352 724 aa7.25□□□□□ -1.25
CKS1B-205ENST00000473344 CLDN10P78369 228 aa7.25□□□□□ -1.25
CKS1B-205ENST00000473344 CBX1P83916 185 aa7.25□□□□□ -1.25
CKS1B-205ENST00000473344 EFEMP1Q12805 493 aa7.25□□□□□ -1.25
CKS1B-205ENST00000473344 ZNF234Q14588 700 aa7.25□□□□□ -1.25
CKS1B-205ENST00000473344 SOWAHCQ53LP3 525 aaPredicted RBP7.25□□□□□ -1.25
CKS1B-205ENST00000473344 CCDC157Q569K6 752 aa7.25□□□□□ -1.25
CKS1B-205ENST00000473344 TEX35Q5T0J7 233 aa7.25□□□□□ -1.25
CKS1B-205ENST00000473344 FYB2Q5VWT5 728 aa7.25□□□□□ -1.25
CKS1B-205ENST00000473344 CEP135Q66GS9 1140 aa7.25□□□□□ -1.25
CKS1B-205ENST00000473344 RSRC2Q7L4I2 434 aaKnown RBP7.25□□□□□ -1.25
CKS1B-205ENST00000473344 TMPRSS7Q7RTY8 843 aa7.25□□□□□ -1.25
CKS1B-205ENST00000473344 ADAT2Q7Z6V5 191 aaKnown RBP7.25□□□□□ -1.25
CKS1B-205ENST00000473344 SLCO6A1Q86UG4 719 aa7.25□□□□□ -1.25
CKS1B-205ENST00000473344 FAM124AQ86V42 546 aa7.25□□□□□ -1.25
CKS1B-205ENST00000473344 CEP57L1Q8IYX8 460 aa7.25□□□□□ -1.25
CKS1B-205ENST00000473344 ARHGAP18Q8N392 663 aa7.25□□□□□ -1.25
CKS1B-205ENST00000473344 CCDC150Q8NCX0 1101 aa7.25□□□□□ -1.25
CKS1B-205ENST00000473344 HNRNPABQ99729 332 aaKnown RBP7.25□□□□□ -1.25
CKS1B-205ENST00000473344 NT5C1AQ9BXI3 368 aa7.25□□□□□ -1.25
CKS1B-205ENST00000473344 TSPY26PQ9H489 355 aa7.25□□□□□ -1.25
CKS1B-205ENST00000473344 SPTLC3Q9NUV7 552 aa7.25□□□□□ -1.25
CKS1B-205ENST00000473344 ELOVL2Q9NXB9 296 aa7.25□□□□□ -1.25
CKS1B-205ENST00000473344 CLIC5Q9NZA1 410 aa7.25□□□□□ -1.25
CKS1B-205ENST00000473344 CWC15Q9P013 229 aaKnown RBP7.25□□□□□ -1.25
CKS1B-205ENST00000473344 THAP10Q9P2Z0 257 aaPredicted RBP7.25□□□□□ -1.25
CKS1B-205ENST00000473344 HMGXB4Q9UGU5 601 aa7.25□□□□□ -1.25
CKS1B-205ENST00000473344 FBXO10Q9UK96 956 aa7.25□□□□□ -1.25
CKS1B-205ENST00000473344 STRIP2Q9ULQ0 834 aa7.25□□□□□ -1.25
CKS1B-205ENST00000473344 PLA2G4CQ9UP65 541 aa7.25□□□□□ -1.25
CKS1B-205ENST00000473344 MTMR6Q9Y217 621 aa7.25□□□□□ -1.25
CKS1B-205ENST00000473344 FNDC3AQ9Y2H6 1198 aaKnown RBP7.25□□□□□ -1.25
CKS1B-205ENST00000473344 FRMD4BQ9Y2L6 1034 aa7.25□□□□□ -1.25
CKS1B-205ENST00000473344 PCDHGB2Q9Y5G2 931 aa7.25□□□□□ -1.25
CKS1B-205ENST00000473344 PKD1L2Q7Z442 2459 aa7.25□□□□□ -1.25
CKS1B-205ENST00000473344 PCDH15Q96QU1 1955 aa7.24□□□□□ -1.25
CKS1B-205ENST00000473344 ZFYVE26Q68DK2 2539 aa7.24□□□□□ -1.25
CKS1B-205ENST00000473344 A0A1B0GVT2 93 aa7.24□□□□□ -1.25
CKS1B-205ENST00000473344 IKBKBO14920 756 aa7.24□□□□□ -1.25
CKS1B-205ENST00000473344 TIMM44O43615 452 aa7.24□□□□□ -1.25
CKS1B-205ENST00000473344 YEATS4O95619 227 aa7.24□□□□□ -1.25
CKS1B-205ENST00000473344 ASS1P00966 412 aaKnown RBP7.24□□□□□ -1.25
CKS1B-205ENST00000473344 PENKP01210 267 aaPredicted RBP7.24□□□□□ -1.25
CKS1B-205ENST00000473344 IGLV3-19P01714 112 aa7.24□□□□□ -1.25
CKS1B-205ENST00000473344 KLKB1P03952 638 aa7.24□□□□□ -1.25
CKS1B-205ENST00000473344 DNTTP04053 509 aa7.24□□□□□ -1.25
CKS1B-205ENST00000473344 ATXN1LP0C7T5 689 aaKnown RBP7.24□□□□□ -1.25
CKS1B-205ENST00000473344 CD58P19256 250 aa7.24□□□□□ -1.25
CKS1B-205ENST00000473344 GRK6P43250 576 aa7.24□□□□□ -1.25
CKS1B-205ENST00000473344 TNNT3P45378 269 aaPredicted RBP7.24□□□□□ -1.25
CKS1B-205ENST00000473344 ASPAP45381 313 aa7.24□□□□□ -1.25
CKS1B-205ENST00000473344 ME1P48163 572 aa7.24□□□□□ -1.25
CKS1B-205ENST00000473344 CSNK1EP49674 416 aaKnown RBP7.24□□□□□ -1.25
CKS1B-205ENST00000473344 KIF11P52732 1056 aa7.24□□□□□ -1.25
CKS1B-205ENST00000473344 COPAP53621 1224 aa7.24□□□□□ -1.25
CKS1B-205ENST00000473344 EHHADHQ08426 723 aa7.24□□□□□ -1.25
CKS1B-205ENST00000473344 CYP4F3Q08477 520 aa7.24□□□□□ -1.25
CKS1B-205ENST00000473344 CUL4BQ13620 913 aa7.24□□□□□ -1.25
CKS1B-205ENST00000473344 ENPP2Q13822 863 aa7.24□□□□□ -1.25
CKS1B-205ENST00000473344 INAVAQ3KP66 663 aa7.24□□□□□ -1.25
CKS1B-205ENST00000473344 ZACNQ401N2 412 aa7.24□□□□□ -1.25
CKS1B-205ENST00000473344 FNDC3BQ53EP0 1204 aaKnown RBP7.24□□□□□ -1.25
CKS1B-205ENST00000473344 SPOPLQ6IQ16 392 aa7.24□□□□□ -1.25
CKS1B-205ENST00000473344 SHC4Q6S5L8 630 aa7.24□□□□□ -1.25
CKS1B-205ENST00000473344 SV2AQ7L0J3 742 aa7.24□□□□□ -1.25
CKS1B-205ENST00000473344 CCDC186Q7Z3E2 898 aa7.24□□□□□ -1.25
CKS1B-205ENST00000473344 DENND1CQ8IV53 801 aa7.24□□□□□ -1.25
CKS1B-205ENST00000473344 PLEKHO2Q8TD55 490 aa7.24□□□□□ -1.25
CKS1B-205ENST00000473344 ANKRD7Q92527 254 aa7.24□□□□□ -1.25
CKS1B-205ENST00000473344 INTS4Q96HW7 963 aaKnown RBP7.24□□□□□ -1.25
CKS1B-205ENST00000473344 ARID3AQ99856 593 aa7.24□□□□□ -1.25
CKS1B-205ENST00000473344 USB1Q9BQ65 265 aaKnown RBP7.24□□□□□ -1.25
CKS1B-205ENST00000473344 SLC2A11Q9BYW1 496 aa7.24□□□□□ -1.25
CKS1B-205ENST00000473344 BTBD1Q9H0C5 482 aa7.24□□□□□ -1.25
CKS1B-205ENST00000473344 PCED1AQ9H1Q7 454 aa7.24□□□□□ -1.25
CKS1B-205ENST00000473344 ATP13A2Q9NQ11 1180 aa7.24□□□□□ -1.25
CKS1B-205ENST00000473344 PRDM9Q9NQV7 894 aa7.24□□□□□ -1.25
CKS1B-205ENST00000473344 EXOC1Q9NV70 894 aa7.24□□□□□ -1.25
CKS1B-205ENST00000473344 GEMIN8Q9NWZ8 242 aaKnown RBP7.24□□□□□ -1.25
CKS1B-205ENST00000473344 DKK4Q9UBT3 224 aa7.24□□□□□ -1.25
CKS1B-205ENST00000473344 AGO1Q9UL18 857 aaKnown RBP7.24□□□□□ -1.25
CKS1B-205ENST00000473344 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.24□□□□□ -1.25
CKS1B-205ENST00000473344 PAXBP1Q9Y5B6 917 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms