RNA–Protein interactions for RNA: ENST00000472490.1

BRCA1-211, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-211ENST00000472490 RBM12Q9NTZ6 932 aaKnown RBP14.73□□□□□ -0.05
BRCA1-211ENST00000472490 PLK2Q9NYY3 685 aa14.73□□□□□ -0.05
BRCA1-211ENST00000472490 FBXO4Q9UKT5 387 aa14.73□□□□□ -0.05
BRCA1-211ENST00000472490 SLC27A6Q9Y2P4 619 aa14.73□□□□□ -0.05
BRCA1-211ENST00000472490 C2CD4BA6NLJ0 364 aa14.72□□□□□ -0.05
BRCA1-211ENST00000472490 CHURC1-FNTBB4DL54 471 aa14.72□□□□□ -0.05
BRCA1-211ENST00000472490 F5H5T6 163 aa14.72□□□□□ -0.05
BRCA1-211ENST00000472490 TSPAN3O60637 253 aa14.72□□□□□ -0.05
BRCA1-211ENST00000472490 PTPN9P43378 593 aa14.72□□□□□ -0.05
BRCA1-211ENST00000472490 CXCR3P49682 368 aa14.72□□□□□ -0.05
BRCA1-211ENST00000472490 KDSRQ06136 332 aa14.72□□□□□ -0.05
BRCA1-211ENST00000472490 ARID5BQ14865 1188 aa14.72□□□□□ -0.05
BRCA1-211ENST00000472490 ARL13BQ3SXY8 428 aa14.72□□□□□ -0.05
BRCA1-211ENST00000472490 FAM133BQ5BKY9 247 aaKnown RBP14.72□□□□□ -0.05
BRCA1-211ENST00000472490 MS4A13Q5J8X5 152 aa14.72□□□□□ -0.05
BRCA1-211ENST00000472490 TTC39BQ5VTQ0 682 aaPredicted RBP14.72□□□□□ -0.05
BRCA1-211ENST00000472490 NAIF1Q69YI7 327 aaPredicted RBP14.72□□□□□ -0.05
BRCA1-211ENST00000472490 STRADAQ7RTN6 431 aa14.72□□□□□ -0.05
BRCA1-211ENST00000472490 TRMT11Q7Z4G4 463 aaKnown RBP14.72□□□□□ -0.05
BRCA1-211ENST00000472490 PHLDB2Q86SQ0 1253 aa14.72□□□□□ -0.05
BRCA1-211ENST00000472490 CHSY1Q86X52 802 aa14.72□□□□□ -0.05
BRCA1-211ENST00000472490 RXFP2Q8WXD0 754 aa14.72□□□□□ -0.05
BRCA1-211ENST00000472490 MRFAP1L1Q96HT8 127 aa14.72□□□□□ -0.05
BRCA1-211ENST00000472490 TBCBQ99426 244 aa14.72□□□□□ -0.05
BRCA1-211ENST00000472490 ISCUQ9H1K1 167 aa14.72□□□□□ -0.05
BRCA1-211ENST00000472490 DEF6Q9H4E7 631 aa14.72□□□□□ -0.05
BRCA1-211ENST00000472490 MRPL47Q9HD33 250 aaKnown RBP14.72□□□□□ -0.05
BRCA1-211ENST00000472490 PIGVQ9NUD9 493 aa14.72□□□□□ -0.05
BRCA1-211ENST00000472490 ABHD10Q9NUJ1 306 aa14.72□□□□□ -0.05
BRCA1-211ENST00000472490 FBXO10Q9UK96 956 aa14.72□□□□□ -0.05
BRCA1-211ENST00000472490 SCINQ9Y6U3 715 aa14.72□□□□□ -0.05
BRCA1-211ENST00000472490 AKR1B15C9JRZ8 316 aaPredicted RBP14.71□□□□□ -0.05
BRCA1-211ENST00000472490 K7EQS6 105 aa14.71□□□□□ -0.05
BRCA1-211ENST00000472490 GFRA2O00451 464 aa14.71□□□□□ -0.05
BRCA1-211ENST00000472490 TIMM44O43615 452 aa14.71□□□□□ -0.05
BRCA1-211ENST00000472490 MFAP3LO75121 409 aa14.71□□□□□ -0.05
BRCA1-211ENST00000472490 ENDOD1O94919 500 aa14.71□□□□□ -0.05
BRCA1-211ENST00000472490 GPD1P21695 349 aa14.71□□□□□ -0.05
BRCA1-211ENST00000472490 RRM1P23921 792 aa14.71□□□□□ -0.05
BRCA1-211ENST00000472490 HOXD9P28356 352 aaPredicted RBP14.71□□□□□ -0.05
BRCA1-211ENST00000472490 RFC1P35251 1148 aaPredicted RBP14.71□□□□□ -0.05
BRCA1-211ENST00000472490 NRLP54845 237 aa14.71□□□□□ -0.05
BRCA1-211ENST00000472490 ATP11AP98196 1134 aa14.71□□□□□ -0.05
BRCA1-211ENST00000472490 EIF4HQ15056 248 aaKnown RBP14.71□□□□□ -0.05
BRCA1-211ENST00000472490 ZNF528Q3MIS6 628 aa14.71□□□□□ -0.05
BRCA1-211ENST00000472490 RABGAP1LQ5R372 815 aa14.71□□□□□ -0.05
BRCA1-211ENST00000472490 C10orf76Q5T2E6 689 aa14.71□□□□□ -0.05
BRCA1-211ENST00000472490 NADSYN1Q6IA69 706 aa14.71□□□□□ -0.05
BRCA1-211ENST00000472490 RFWD3Q6PCD5 774 aa14.71□□□□□ -0.05
BRCA1-211ENST00000472490 Q6ZS52 159 aa14.71□□□□□ -0.05
BRCA1-211ENST00000472490 TMC6Q7Z403 805 aa14.71□□□□□ -0.05
BRCA1-211ENST00000472490 ANKS1BQ7Z6G8 1248 aa14.71□□□□□ -0.05
BRCA1-211ENST00000472490 GAS2L3Q86XJ1 694 aa14.71□□□□□ -0.05
BRCA1-211ENST00000472490 PHTF2Q8N3S3 785 aa14.71□□□□□ -0.05
BRCA1-211ENST00000472490 EMC1Q8N766 993 aa14.71□□□□□ -0.05
BRCA1-211ENST00000472490 RPLP0P6Q8NHW5 317 aa14.71□□□□□ -0.05
BRCA1-211ENST00000472490 UCMAQ8WVF2 138 aa14.71□□□□□ -0.05
BRCA1-211ENST00000472490 MCEEQ96PE7 176 aa14.71□□□□□ -0.05
BRCA1-211ENST00000472490 FAM126AQ9BYI3 521 aaPredicted RBP14.71□□□□□ -0.05
BRCA1-211ENST00000472490 TKTL2Q9H0I9 626 aa14.71□□□□□ -0.05
BRCA1-211ENST00000472490 ARHGEF38Q9NXL2 777 aa14.71□□□□□ -0.05
BRCA1-211ENST00000472490 TAS2R14Q9NYV8 317 aa14.71□□□□□ -0.05
BRCA1-211ENST00000472490 STARD13Q9Y3M8 1113 aa14.71□□□□□ -0.05
BRCA1-211ENST00000472490 COL4A3Q01955 1670 aa14.71□□□□□ -0.06
BRCA1-211ENST00000472490 GOLGA6L7A0A1B0GV03 622 aa14.7□□□□□ -0.06
BRCA1-211ENST00000472490 SSU72P8A0A1W2PR75 194 aa14.7□□□□□ -0.06
BRCA1-211ENST00000472490 TCRBV5S1A1TA0A578 114 aa14.7□□□□□ -0.06
BRCA1-211ENST00000472490 NPC1O15118 1278 aa14.7□□□□□ -0.06
BRCA1-211ENST00000472490 TBL1XO60907 577 aa14.7□□□□□ -0.06
BRCA1-211ENST00000472490 PAPSS2O95340 614 aaPredicted RBP14.7□□□□□ -0.06
BRCA1-211ENST00000472490 TACR2P21452 398 aa14.7□□□□□ -0.06
BRCA1-211ENST00000472490 SLC6A4P31645 630 aa14.7□□□□□ -0.06
BRCA1-211ENST00000472490 ZNF143P52747 638 aaPredicted RBP14.7□□□□□ -0.06
BRCA1-211ENST00000472490 OXCT1P55809 520 aa14.7□□□□□ -0.06
BRCA1-211ENST00000472490 MAMLD1Q13495 774 aa14.7□□□□□ -0.06
BRCA1-211ENST00000472490 CDH18Q13634 790 aa14.7□□□□□ -0.06
BRCA1-211ENST00000472490 GAS6Q14393 721 aa14.7□□□□□ -0.06
BRCA1-211ENST00000472490 CCDC14Q49A88 953 aa14.7□□□□□ -0.06
BRCA1-211ENST00000472490 RAP1GAP2Q684P5 730 aa14.7□□□□□ -0.06
BRCA1-211ENST00000472490 PLEKHA7Q6IQ23 1121 aa14.7□□□□□ -0.06
BRCA1-211ENST00000472490 SDE2Q6IQ49 451 aa14.7□□□□□ -0.06
BRCA1-211ENST00000472490 ALKBH5Q6P6C2 394 aaKnown RBP14.7□□□□□ -0.06
BRCA1-211ENST00000472490 WDR59Q6PJI9 974 aa14.7□□□□□ -0.06
BRCA1-211ENST00000472490 LRRC31Q6UY01 552 aa14.7□□□□□ -0.06
BRCA1-211ENST00000472490 SYT13Q7L8C5 426 aa14.7□□□□□ -0.06
BRCA1-211ENST00000472490 BNIPLQ7Z465 357 aa14.7□□□□□ -0.06
BRCA1-211ENST00000472490 MFN1Q8IWA4 741 aa14.7□□□□□ -0.06
BRCA1-211ENST00000472490 LGI2Q8N0V4 545 aa14.7□□□□□ -0.06
BRCA1-211ENST00000472490 USP33Q8TEY7 942 aa14.7□□□□□ -0.06
BRCA1-211ENST00000472490 C1orf74Q96LT6 269 aa14.7□□□□□ -0.06
BRCA1-211ENST00000472490 HAPLN3Q96S86 360 aa14.7□□□□□ -0.06
BRCA1-211ENST00000472490 PPP1R9BQ96SB3 815 aa14.7□□□□□ -0.06
BRCA1-211ENST00000472490 PRMT8Q9NR22 394 aaPredicted RBP14.7□□□□□ -0.06
BRCA1-211ENST00000472490 ARHGAP20Q9P2F6 1191 aa14.7□□□□□ -0.06
BRCA1-211ENST00000472490 CNOT8Q9UFF9 292 aaKnown RBP14.7□□□□□ -0.06
BRCA1-211ENST00000472490 SLC8A2Q9UPR5 921 aa14.7□□□□□ -0.06
BRCA1-211ENST00000472490 A0A087X0T9 212 aa14.69□□□□□ -0.06
BRCA1-211ENST00000472490 H0Y858 1186 aa14.69□□□□□ -0.06
BRCA1-211ENST00000472490 PAGE1O75459 146 aa14.69□□□□□ -0.06
BRCA1-211ENST00000472490 CISD3P0C7P0 127 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms