RNA–Protein interactions for RNA: ENST00000471455.1

CPSF4-211, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 569 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-211ENST00000471455 PDXKO00764 312 aa9.56□□□□□ -0.88
CPSF4-211ENST00000471455 MAPK13O15264 365 aa9.56□□□□□ -0.88
CPSF4-211ENST00000471455 CALUO43852 315 aaPredicted RBP9.56□□□□□ -0.88
CPSF4-211ENST00000471455 STC2O76061 302 aa9.56□□□□□ -0.88
CPSF4-211ENST00000471455 VNN1O95497 513 aa9.56□□□□□ -0.88
CPSF4-211ENST00000471455 IGLV3-19P01714 112 aa9.56□□□□□ -0.88
CPSF4-211ENST00000471455 NR3C1P04150 777 aa9.56□□□□□ -0.88
CPSF4-211ENST00000471455 MYL1P05976 194 aa9.56□□□□□ -0.88
CPSF4-211ENST00000471455 KRT13P13646 458 aa9.56□□□□□ -0.88
CPSF4-211ENST00000471455 MAOBP27338 520 aa9.56□□□□□ -0.88
CPSF4-211ENST00000471455 CORO1AP31146 461 aaKnown RBP9.56□□□□□ -0.88
CPSF4-211ENST00000471455 IL12RB1P42701 662 aa9.56□□□□□ -0.88
CPSF4-211ENST00000471455 ME1P48163 572 aa9.56□□□□□ -0.88
CPSF4-211ENST00000471455 TPMTP51580 245 aa9.56□□□□□ -0.88
CPSF4-211ENST00000471455 AFF3P51826 1226 aaKnown RBP9.56□□□□□ -0.88
CPSF4-211ENST00000471455 KIF11P52732 1056 aa9.56□□□□□ -0.88
CPSF4-211ENST00000471455 CBLBQ13191 982 aa9.56□□□□□ -0.88
CPSF4-211ENST00000471455 ORC1Q13415 861 aa9.56□□□□□ -0.88
CPSF4-211ENST00000471455 ENPP2Q13822 863 aa9.56□□□□□ -0.88
CPSF4-211ENST00000471455 SHC4Q6S5L8 630 aa9.56□□□□□ -0.88
CPSF4-211ENST00000471455 SERPINA13PQ6UXR4 307 aa9.56□□□□□ -0.88
CPSF4-211ENST00000471455 INTS8Q75QN2 995 aaKnown RBP9.56□□□□□ -0.88
CPSF4-211ENST00000471455 SV2AQ7L0J3 742 aa9.56□□□□□ -0.88
CPSF4-211ENST00000471455 GPRIN1Q7Z2K8 1008 aa9.56□□□□□ -0.88
CPSF4-211ENST00000471455 PDZD3Q86UT5 571 aa9.56□□□□□ -0.88
CPSF4-211ENST00000471455 TMPRSS6Q8IU80 811 aa9.56□□□□□ -0.88
CPSF4-211ENST00000471455 C12orf29Q8N999 325 aa9.56□□□□□ -0.88
CPSF4-211ENST00000471455 PLEKHO2Q8TD55 490 aa9.56□□□□□ -0.88
CPSF4-211ENST00000471455 CCDC47Q96A33 483 aaKnown RBP9.56□□□□□ -0.88
CPSF4-211ENST00000471455 ERLEC1Q96DZ1 483 aa9.56□□□□□ -0.88
CPSF4-211ENST00000471455 CAMK1GQ96NX5 476 aa9.56□□□□□ -0.88
CPSF4-211ENST00000471455 CIPCQ9C0C6 399 aa9.56□□□□□ -0.88
CPSF4-211ENST00000471455 NIF3L1Q9GZT8 377 aa9.56□□□□□ -0.88
CPSF4-211ENST00000471455 SLC6A17Q9H1V8 727 aa9.56□□□□□ -0.88
CPSF4-211ENST00000471455 NMUR1Q9HB89 426 aa9.56□□□□□ -0.88
CPSF4-211ENST00000471455 TM7SF3Q9NS93 570 aa9.56□□□□□ -0.88
CPSF4-211ENST00000471455 DMAC2Q9NW81 257 aa9.56□□□□□ -0.88
CPSF4-211ENST00000471455 PLK2Q9NYY3 685 aa9.56□□□□□ -0.88
CPSF4-211ENST00000471455 HMGXB4Q9UGU5 601 aa9.56□□□□□ -0.88
CPSF4-211ENST00000471455 MDM4O15151 490 aa9.55□□□□□ -0.88
CPSF4-211ENST00000471455 CBFA2T3O75081 653 aa9.55□□□□□ -0.88
CPSF4-211ENST00000471455 CILPO75339 1184 aa9.55□□□□□ -0.88
CPSF4-211ENST00000471455 HLA-DRAP01903 254 aa9.55□□□□□ -0.88
CPSF4-211ENST00000471455 EPHX1P07099 455 aa9.55□□□□□ -0.88
CPSF4-211ENST00000471455 AFMP43652 599 aa9.55□□□□□ -0.88
CPSF4-211ENST00000471455 PGFP49763 221 aa9.55□□□□□ -0.88
CPSF4-211ENST00000471455 ZBTB16Q05516 673 aa9.55□□□□□ -0.88
CPSF4-211ENST00000471455 ENPEPQ07075 957 aa9.55□□□□□ -0.88
CPSF4-211ENST00000471455 PDE4CQ08493 712 aa9.55□□□□□ -0.88
CPSF4-211ENST00000471455 EFEMP1Q12805 493 aa9.55□□□□□ -0.88
CPSF4-211ENST00000471455 CUL4BQ13620 913 aa9.55□□□□□ -0.88
CPSF4-211ENST00000471455 ZNF234Q14588 700 aa9.55□□□□□ -0.88
CPSF4-211ENST00000471455 TTC31Q49AM3 519 aaPredicted RBP9.55□□□□□ -0.88
CPSF4-211ENST00000471455 FYB2Q5VWT5 728 aa9.55□□□□□ -0.88
CPSF4-211ENST00000471455 CEP135Q66GS9 1140 aa9.55□□□□□ -0.88
CPSF4-211ENST00000471455 ATL3Q6DD88 541 aa9.55□□□□□ -0.88
CPSF4-211ENST00000471455 CPXM2Q8N436 756 aa9.55□□□□□ -0.88
CPSF4-211ENST00000471455 ZNF557Q8N988 423 aaPredicted RBP9.55□□□□□ -0.88
CPSF4-211ENST00000471455 OR2T3Q8NH03 318 aa9.55□□□□□ -0.88
CPSF4-211ENST00000471455 WFIKKN2Q8TEU8 576 aa9.55□□□□□ -0.88
CPSF4-211ENST00000471455 DDI1Q8WTU0 396 aa9.55□□□□□ -0.88
CPSF4-211ENST00000471455 SNX19Q92543 992 aa9.55□□□□□ -0.88
CPSF4-211ENST00000471455 PLD4Q96BZ4 506 aa9.55□□□□□ -0.88
CPSF4-211ENST00000471455 FAXDC2Q96IV6 333 aa9.55□□□□□ -0.88
CPSF4-211ENST00000471455 DUSP16Q9BY84 665 aa9.55□□□□□ -0.88
CPSF4-211ENST00000471455 MKRN2Q9H000 416 aaKnown RBP9.55□□□□□ -0.88
CPSF4-211ENST00000471455 LHX5Q9H2C1 402 aa9.55□□□□□ -0.88
CPSF4-211ENST00000471455 CD93Q9NPY3 652 aa9.55□□□□□ -0.88
CPSF4-211ENST00000471455 TMPRSS4Q9NRS4 437 aa9.55□□□□□ -0.88
CPSF4-211ENST00000471455 OLA1Q9NTK5 396 aaKnown RBP9.55□□□□□ -0.88
CPSF4-211ENST00000471455 OSER1Q9NX31 292 aa9.55□□□□□ -0.88
CPSF4-211ENST00000471455 ELOVL2Q9NXB9 296 aa9.55□□□□□ -0.88
CPSF4-211ENST00000471455 MARCH2Q9P0N8 246 aa9.55□□□□□ -0.88
CPSF4-211ENST00000471455 DKK4Q9UBT3 224 aa9.55□□□□□ -0.88
CPSF4-211ENST00000471455 USP25Q9UHP3 1055 aa9.55□□□□□ -0.88
CPSF4-211ENST00000471455 CFAP45Q9UL16 551 aa9.55□□□□□ -0.88
CPSF4-211ENST00000471455 DSPP15924 2871 aaKnown RBP9.54□□□□□ -0.88
CPSF4-211ENST00000471455 WASH3PC4AMC7 463 aa9.54□□□□□ -0.88
CPSF4-211ENST00000471455 HHLA1C9JL84 531 aa9.54□□□□□ -0.88
CPSF4-211ENST00000471455 K7ELQ4 463 aaPredicted RBP9.54□□□□□ -0.88
CPSF4-211ENST00000471455 DFNA5O60443 496 aa9.54□□□□□ -0.88
CPSF4-211ENST00000471455 CAPNS1P04632 268 aa9.54□□□□□ -0.88
CPSF4-211ENST00000471455 CENPBP07199 599 aaPredicted RBP9.54□□□□□ -0.88
CPSF4-211ENST00000471455 HMBSP08397 361 aa9.54□□□□□ -0.88
CPSF4-211ENST00000471455 SLFN14P0C7P3 912 aa9.54□□□□□ -0.88
CPSF4-211ENST00000471455 CD58P19256 250 aa9.54□□□□□ -0.88
CPSF4-211ENST00000471455 RPL13P26373 211 aaKnown RBP9.54□□□□□ -0.88
CPSF4-211ENST00000471455 GRK6P43250 576 aa9.54□□□□□ -0.88
CPSF4-211ENST00000471455 HARS2P49590 506 aaKnown RBP9.54□□□□□ -0.88
CPSF4-211ENST00000471455 CCT8P50990 548 aa9.54□□□□□ -0.88
CPSF4-211ENST00000471455 VAMP7P51809 220 aa9.54□□□□□ -0.88
CPSF4-211ENST00000471455 DLG4P78352 724 aa9.54□□□□□ -0.88
CPSF4-211ENST00000471455 SFSWAPQ12872 951 aaKnown RBP9.54□□□□□ -0.88
CPSF4-211ENST00000471455 GEN1Q17RS7 908 aa9.54□□□□□ -0.88
CPSF4-211ENST00000471455 HLA-BQ31612 363 aa9.54□□□□□ -0.88
CPSF4-211ENST00000471455 MPPE1Q53F39 396 aa9.54□□□□□ -0.88
CPSF4-211ENST00000471455 RESP18Q5W5W9 173 aa9.54□□□□□ -0.88
CPSF4-211ENST00000471455 SPOPLQ6IQ16 392 aa9.54□□□□□ -0.88
CPSF4-211ENST00000471455 C19orf48Q6RUI8 117 aa9.54□□□□□ -0.88
CPSF4-211ENST00000471455 Q6ZVU0 165 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms