RNA–Protein interactions for RNA: ENST00000471218.5

PTPRE-207, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 3 BASIC

Gene PTPRE, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-207ENST00000471218 ITGAVP06756 1048 aa9.49□□□□□ -0.89
PTPRE-207ENST00000471218 RHOXF2BP0C7M4 288 aa9.49□□□□□ -0.89
PTPRE-207ENST00000471218 RARAP10276 462 aa9.49□□□□□ -0.89
PTPRE-207ENST00000471218 IGFBP6P24592 240 aaPredicted RBP9.49□□□□□ -0.89
PTPRE-207ENST00000471218 IL1R2P27930 398 aa9.49□□□□□ -0.89
PTPRE-207ENST00000471218 HOXA9P31269 272 aa9.49□□□□□ -0.89
PTPRE-207ENST00000471218 GRIK1P39086 918 aa9.49□□□□□ -0.89
PTPRE-207ENST00000471218 KPNA1P52294 538 aaPredicted RBP9.49□□□□□ -0.89
PTPRE-207ENST00000471218 SLC5A3P53794 718 aa9.49□□□□□ -0.89
PTPRE-207ENST00000471218 STARD6P59095 220 aa9.49□□□□□ -0.89
PTPRE-207ENST00000471218 VSNL1P62760 191 aa9.49□□□□□ -0.89
PTPRE-207ENST00000471218 NRG1Q02297 640 aaPredicted RBP9.49□□□□□ -0.89
PTPRE-207ENST00000471218 PPP2R5DQ14738 602 aa9.49□□□□□ -0.89
PTPRE-207ENST00000471218 PSMD5Q16401 504 aa9.49□□□□□ -0.89
PTPRE-207ENST00000471218 DCAF6Q58WW2 860 aa9.49□□□□□ -0.89
PTPRE-207ENST00000471218 TRNP1Q6NT89 227 aa9.49□□□□□ -0.89
PTPRE-207ENST00000471218 CCDC137Q6PK04 289 aaKnown RBP9.49□□□□□ -0.89
PTPRE-207ENST00000471218 MFSD7Q6UXD7 560 aa9.49□□□□□ -0.89
PTPRE-207ENST00000471218 CYP4V2Q6ZWL3 525 aaPredicted RBP9.49□□□□□ -0.89
PTPRE-207ENST00000471218 BHLHA9Q7RTU4 235 aa9.49□□□□□ -0.89
PTPRE-207ENST00000471218 PHLDB2Q86SQ0 1253 aa9.49□□□□□ -0.89
PTPRE-207ENST00000471218 JAMLQ86YT9 394 aa9.49□□□□□ -0.89
PTPRE-207ENST00000471218 DEFB106AQ8N104 65 aa9.49□□□□□ -0.89
PTPRE-207ENST00000471218 MREGQ8N565 214 aa9.49□□□□□ -0.89
PTPRE-207ENST00000471218 KCTD6Q8NC69 237 aa9.49□□□□□ -0.89
PTPRE-207ENST00000471218 HAUS1Q96CS2 278 aa9.49□□□□□ -0.89
PTPRE-207ENST00000471218 PIWIL1Q96J94 861 aaKnown RBP9.49□□□□□ -0.89
PTPRE-207ENST00000471218 CFAP57Q96MR6 1250 aa9.49□□□□□ -0.89
PTPRE-207ENST00000471218 PNKPQ96T60 521 aa9.49□□□□□ -0.89
PTPRE-207ENST00000471218 RHOXF2Q9BQY4 288 aa9.49□□□□□ -0.89
PTPRE-207ENST00000471218 AP1M1Q9BXS5 423 aa9.49□□□□□ -0.89
PTPRE-207ENST00000471218 PHACTR1Q9C0D0 580 aa9.49□□□□□ -0.89
PTPRE-207ENST00000471218 BRD8Q9H0E9 1235 aa9.49□□□□□ -0.89
PTPRE-207ENST00000471218 DDX47Q9H0S4 455 aaKnown RBP9.49□□□□□ -0.89
PTPRE-207ENST00000471218 ACBD3Q9H3P7 528 aa9.49□□□□□ -0.89
PTPRE-207ENST00000471218 SMOC2Q9H3U7 446 aa9.49□□□□□ -0.89
PTPRE-207ENST00000471218 ZWILCHQ9H900 591 aa9.49□□□□□ -0.89
PTPRE-207ENST00000471218 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.49□□□□□ -0.89
PTPRE-207ENST00000471218 TMLHEQ9NVH6 421 aa9.49□□□□□ -0.89
PTPRE-207ENST00000471218 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.49□□□□□ -0.89
PTPRE-207ENST00000471218 MRPS17Q9Y2R5 130 aaKnown RBP9.49□□□□□ -0.89
PTPRE-207ENST00000471218 V9GYY5 206 aaPredicted RBP9.49□□□□□ -0.89
PTPRE-207ENST00000471218 PATJQ8NI35 1801 aa9.48□□□□□ -0.89
PTPRE-207ENST00000471218 MTMR11A4FU01 709 aa9.48□□□□□ -0.89
PTPRE-207ENST00000471218 YJEFN3A6XGL0 299 aa9.48□□□□□ -0.89
PTPRE-207ENST00000471218 PRR5-ARHGAP8B1AHC4 643 aa9.48□□□□□ -0.89
PTPRE-207ENST00000471218 E7ENQ6 273 aa9.48□□□□□ -0.89
PTPRE-207ENST00000471218 H3BRJ5 948 aa9.48□□□□□ -0.89
PTPRE-207ENST00000471218 LAMTOR5O43504 91 aa9.48□□□□□ -0.89
PTPRE-207ENST00000471218 ZMYND10O75800 440 aa9.48□□□□□ -0.89
PTPRE-207ENST00000471218 ABLIM3O94929 683 aa9.48□□□□□ -0.89
PTPRE-207ENST00000471218 GJB6O95452 261 aa9.48□□□□□ -0.89
PTPRE-207ENST00000471218 POU2F2P09086 479 aa9.48□□□□□ -0.89
PTPRE-207ENST00000471218 HAPLN1P10915 354 aaPredicted RBP9.48□□□□□ -0.89
PTPRE-207ENST00000471218 CPB1P15086 417 aa9.48□□□□□ -0.89
PTPRE-207ENST00000471218 FSHRP23945 695 aa9.48□□□□□ -0.89
PTPRE-207ENST00000471218 STIP1P31948 543 aaKnown RBP9.48□□□□□ -0.89
PTPRE-207ENST00000471218 ARL4AP40617 200 aa9.48□□□□□ -0.89
PTPRE-207ENST00000471218 CXCR3P49682 368 aa9.48□□□□□ -0.89
PTPRE-207ENST00000471218 SULT1E1P49888 294 aa9.48□□□□□ -0.89
PTPRE-207ENST00000471218 TUBP50607 506 aa9.48□□□□□ -0.89
PTPRE-207ENST00000471218 CLCN6P51797 869 aa9.48□□□□□ -0.89
PTPRE-207ENST00000471218 RNASE9P60153 205 aaKnown RBP9.48□□□□□ -0.89
PTPRE-207ENST00000471218 ARHGAP8P85298 464 aa9.48□□□□□ -0.89
PTPRE-207ENST00000471218 PLD1Q13393 1074 aa9.48□□□□□ -0.89
PTPRE-207ENST00000471218 XRCC4Q13426 336 aa9.48□□□□□ -0.89
PTPRE-207ENST00000471218 EIF4EBP2Q13542 120 aaPredicted RBP9.48□□□□□ -0.89
PTPRE-207ENST00000471218 PTK6Q13882 451 aa9.48□□□□□ -0.89
PTPRE-207ENST00000471218 RAB33AQ14088 237 aa9.48□□□□□ -0.89
PTPRE-207ENST00000471218 DPYSL3Q14195 570 aa9.48□□□□□ -0.89
PTPRE-207ENST00000471218 KRT81Q14533 505 aa9.48□□□□□ -0.89
PTPRE-207ENST00000471218 EFHC2Q5JST6 749 aa9.48□□□□□ -0.89
PTPRE-207ENST00000471218 RTP2Q5QGT7 225 aa9.48□□□□□ -0.89
PTPRE-207ENST00000471218 BEND6Q5SZJ8 279 aaPredicted RBP9.48□□□□□ -0.89
PTPRE-207ENST00000471218 ZFYVE27Q5T4F4 411 aa9.48□□□□□ -0.89
PTPRE-207ENST00000471218 SNX30Q5VWJ9 437 aa9.48□□□□□ -0.89
PTPRE-207ENST00000471218 BSPRYQ5W0U4 402 aa9.48□□□□□ -0.89
PTPRE-207ENST00000471218 DUPD1Q68J44 220 aa9.48□□□□□ -0.89
PTPRE-207ENST00000471218 SLC9A4Q6AI14 798 aa9.48□□□□□ -0.89
PTPRE-207ENST00000471218 KLHDC10Q6PID8 442 aa9.48□□□□□ -0.89
PTPRE-207ENST00000471218 DENND5BQ6ZUT9 1274 aa9.48□□□□□ -0.89
PTPRE-207ENST00000471218 PDZD4Q76G19 769 aaPredicted RBP9.48□□□□□ -0.89
PTPRE-207ENST00000471218 HDXQ7Z353 690 aa9.48□□□□□ -0.89
PTPRE-207ENST00000471218 ZNF461Q8TAF7 563 aa9.48□□□□□ -0.89
PTPRE-207ENST00000471218 SLC35B2Q8TB61 432 aa9.48□□□□□ -0.89
PTPRE-207ENST00000471218 AENQ8WTP8 325 aaKnown RBP9.48□□□□□ -0.89
PTPRE-207ENST00000471218 BCL7CQ8WUZ0 217 aaPredicted RBP9.48□□□□□ -0.89
PTPRE-207ENST00000471218 RAPGEF5Q92565 580 aa9.48□□□□□ -0.89
PTPRE-207ENST00000471218 TRMT2BQ96GJ1 504 aaKnown RBP9.48□□□□□ -0.89
PTPRE-207ENST00000471218 SERPINB11Q96P15 392 aa9.48□□□□□ -0.89
PTPRE-207ENST00000471218 KCNK16Q96T55 309 aa9.48□□□□□ -0.89
PTPRE-207ENST00000471218 LPIN3Q9BQK8 851 aa9.48□□□□□ -0.89
PTPRE-207ENST00000471218 VN1R3Q9BXE9 311 aa9.48□□□□□ -0.89
PTPRE-207ENST00000471218 MAK16Q9BXY0 300 aaKnown RBP9.48□□□□□ -0.89
PTPRE-207ENST00000471218 FAM126AQ9BYI3 521 aaPredicted RBP9.48□□□□□ -0.89
PTPRE-207ENST00000471218 OSBPL2Q9H1P3 480 aa9.48□□□□□ -0.89
PTPRE-207ENST00000471218 PCDH18Q9HCL0 1135 aa9.48□□□□□ -0.89
PTPRE-207ENST00000471218 TMEM30AQ9NV96 361 aa9.48□□□□□ -0.89
PTPRE-207ENST00000471218 ABI2Q9NYB9 513 aaPredicted RBP9.48□□□□□ -0.89
PTPRE-207ENST00000471218 SMARCAL1Q9NZC9 954 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms