RNA–Protein interactions for RNA: ENST00000470339.1

COL4A5-203, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 3

Gene COL4A5, Length 782 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-203ENST00000470339 TMPRSS4Q9NRS4 437 aa15.65■□□□□ 0.1
COL4A5-203ENST00000470339 AMACRQ9UHK6 382 aa15.65■□□□□ 0.1
COL4A5-203ENST00000470339 RAD54BQ9Y620 910 aa15.65■□□□□ 0.1
COL4A5-203ENST00000470339 DOCK6Q96HP0 2047 aa15.65■□□□□ 0.1
COL4A5-203ENST00000470339 NOTCH4Q99466 2003 aa15.65■□□□□ 0.1
COL4A5-203ENST00000470339 HELZP42694 1942 aaKnown RBP15.64■□□□□ 0.09
COL4A5-203ENST00000470339 FAM72CH0Y354 149 aa15.64■□□□□ 0.09
COL4A5-203ENST00000470339 CCL16O15467 120 aa15.64■□□□□ 0.09
COL4A5-203ENST00000470339 RAD51CO43502 376 aa15.64■□□□□ 0.09
COL4A5-203ENST00000470339 CREB3O43889 395 aa15.64■□□□□ 0.09
COL4A5-203ENST00000470339 ITGAVP06756 1048 aa15.64■□□□□ 0.09
COL4A5-203ENST00000470339 DDX6P26196 483 aaKnown RBP eCLIP15.64■□□□□ 0.09
COL4A5-203ENST00000470339 GABRR2P28476 465 aa15.64■□□□□ 0.09
COL4A5-203ENST00000470339 HOXC13P31276 330 aa15.64■□□□□ 0.09
COL4A5-203ENST00000470339 PTGIRP43119 386 aa15.64■□□□□ 0.09
COL4A5-203ENST00000470339 VCPP55072 806 aaKnown RBP15.64■□□□□ 0.09
COL4A5-203ENST00000470339 TPI1P60174 286 aa15.64■□□□□ 0.09
COL4A5-203ENST00000470339 OTUD4Q01804 1114 aaKnown RBP15.64■□□□□ 0.09
COL4A5-203ENST00000470339 XRCC4Q13426 336 aa15.64■□□□□ 0.09
COL4A5-203ENST00000470339 MYO9BQ13459 2157 aa15.64■□□□□ 0.09
COL4A5-203ENST00000470339 BYSLQ13895 437 aaKnown RBP15.64■□□□□ 0.09
COL4A5-203ENST00000470339 PAFAH1B3Q15102 231 aaKnown RBP15.64■□□□□ 0.09
COL4A5-203ENST00000470339 ELF2Q15723 593 aa15.64■□□□□ 0.09
COL4A5-203ENST00000470339 FAM72AQ5TYM5 149 aa15.64■□□□□ 0.09
COL4A5-203ENST00000470339 MANEALQ5VSG8 457 aa15.64■□□□□ 0.09
COL4A5-203ENST00000470339 FAM72DQ6L9T8 149 aa15.64■□□□□ 0.09
COL4A5-203ENST00000470339 WDR93Q6P2C0 686 aa15.64■□□□□ 0.09
COL4A5-203ENST00000470339 GAREM2Q75VX8 874 aa15.64■□□□□ 0.09
COL4A5-203ENST00000470339 PDZD4Q76G19 769 aaPredicted RBP15.64■□□□□ 0.09
COL4A5-203ENST00000470339 FAM72BQ86X60 149 aa15.64■□□□□ 0.09
COL4A5-203ENST00000470339 CCDC105Q8IYK2 499 aa15.64■□□□□ 0.09
COL4A5-203ENST00000470339 ACTL9Q8TC94 416 aa15.64■□□□□ 0.09
COL4A5-203ENST00000470339 KLF16Q9BXK1 252 aaPredicted RBP15.64■□□□□ 0.09
COL4A5-203ENST00000470339 PRKD2Q9BZL6 878 aa15.64■□□□□ 0.09
COL4A5-203ENST00000470339 RNF38Q9H0F5 515 aa15.64■□□□□ 0.09
COL4A5-203ENST00000470339 RAB17Q9H0T7 212 aa15.64■□□□□ 0.09
COL4A5-203ENST00000470339 RETREG1Q9H6L5 497 aa15.64■□□□□ 0.09
COL4A5-203ENST00000470339 DONSONQ9NYP3 566 aa15.64■□□□□ 0.09
COL4A5-203ENST00000470339 ZMYM5Q9UJ78 669 aa15.64■□□□□ 0.09
COL4A5-203ENST00000470339 RAB21Q9UL25 225 aa15.64■□□□□ 0.09
COL4A5-203ENST00000470339 HCFC2Q9Y5Z7 792 aa15.64■□□□□ 0.09
COL4A5-203ENST00000470339 BHMG1C9JSJ3 638 aaPredicted RBP15.63■□□□□ 0.09
COL4A5-203ENST00000470339 PER2O15055 1255 aa15.63■□□□□ 0.09
COL4A5-203ENST00000470339 DCLK1O15075 740 aa15.63■□□□□ 0.09
COL4A5-203ENST00000470339 FGF10O15520 208 aaPredicted RBP15.63■□□□□ 0.09
COL4A5-203ENST00000470339 DAPK3O43293 454 aa15.63■□□□□ 0.09
COL4A5-203ENST00000470339 ZNF189O75820 626 aaPredicted RBP15.63■□□□□ 0.09
COL4A5-203ENST00000470339 LRIG2O94898 1065 aa15.63■□□□□ 0.09
COL4A5-203ENST00000470339 CSPG5O95196 566 aa15.63■□□□□ 0.09
COL4A5-203ENST00000470339 LATS1O95835 1130 aa15.63■□□□□ 0.09
COL4A5-203ENST00000470339 GAS8O95995 478 aa15.63■□□□□ 0.09
COL4A5-203ENST00000470339 AMPD1P23109 780 aa15.63■□□□□ 0.09
COL4A5-203ENST00000470339 HARS2P49590 506 aaKnown RBP15.63■□□□□ 0.09
COL4A5-203ENST00000470339 DYNLT1P63172 113 aa15.63■□□□□ 0.09
COL4A5-203ENST00000470339 KCNC3Q14003 757 aa15.63■□□□□ 0.09
COL4A5-203ENST00000470339 NOMO1Q15155 1222 aa15.63■□□□□ 0.09
COL4A5-203ENST00000470339 OASLQ15646 514 aaKnown RBP15.63■□□□□ 0.09
COL4A5-203ENST00000470339 ADGRD2Q7Z7M1 963 aa15.63■□□□□ 0.09
COL4A5-203ENST00000470339 IFT20Q8IY31 132 aa15.63■□□□□ 0.09
COL4A5-203ENST00000470339 HS6ST3Q8IZP7 471 aa15.63■□□□□ 0.09
COL4A5-203ENST00000470339 EIF1ADQ8N9N8 165 aaKnown RBP15.63■□□□□ 0.09
COL4A5-203ENST00000470339 GDPD5Q8WTR4 605 aa15.63■□□□□ 0.09
COL4A5-203ENST00000470339 ATG4AQ8WYN0 398 aa15.63■□□□□ 0.09
COL4A5-203ENST00000470339 CORO1BQ9BR76 489 aa15.63■□□□□ 0.09
COL4A5-203ENST00000470339 SIK2Q9H0K1 926 aa15.63■□□□□ 0.09
COL4A5-203ENST00000470339 PPARGC1AQ9UBK2 798 aaKnown RBP15.63■□□□□ 0.09
COL4A5-203ENST00000470339 DNPEPQ9ULA0 475 aa15.63■□□□□ 0.09
COL4A5-203ENST00000470339 HS3ST4Q9Y661 456 aa15.63■□□□□ 0.09
COL4A5-203ENST00000470339 NUP205Q92621 2012 aa15.63■□□□□ 0.09
COL4A5-203ENST00000470339 RANBP2P49792 3224 aaKnown RBP15.62■□□□□ 0.09
COL4A5-203ENST00000470339 A0A1W2PPC1 479 aa15.62■□□□□ 0.09
COL4A5-203ENST00000470339 C2orf78A6NCI8 922 aa15.62■□□□□ 0.09
COL4A5-203ENST00000470339 EPOPA6NHQ4 379 aa15.62■□□□□ 0.09
COL4A5-203ENST00000470339 ZNF197O14709 1029 aa15.62■□□□□ 0.09
COL4A5-203ENST00000470339 MCF2LO15068 1137 aa15.62■□□□□ 0.09
COL4A5-203ENST00000470339 TTI1O43156 1089 aa15.62■□□□□ 0.09
COL4A5-203ENST00000470339 RFPL2O75678 378 aa15.62■□□□□ 0.09
COL4A5-203ENST00000470339 HEXIM1O94992 359 aaKnown RBP15.62■□□□□ 0.09
COL4A5-203ENST00000470339 ECEL1O95672 775 aa15.62■□□□□ 0.09
COL4A5-203ENST00000470339 ERCC2P18074 760 aa15.62■□□□□ 0.09
COL4A5-203ENST00000470339 HDCP19113 662 aa15.62■□□□□ 0.09
COL4A5-203ENST00000470339 SLC11A2P49281 568 aa15.62■□□□□ 0.09
COL4A5-203ENST00000470339 DRG2P55039 364 aaKnown RBP15.62■□□□□ 0.09
COL4A5-203ENST00000470339 EIF3EP60228 445 aaKnown RBP15.62■□□□□ 0.09
COL4A5-203ENST00000470339 SLC7A9P82251 487 aa15.62■□□□□ 0.09
COL4A5-203ENST00000470339 SNX1Q13596 522 aa15.62■□□□□ 0.09
COL4A5-203ENST00000470339 ARTNQ5T4W7 220 aa15.62■□□□□ 0.09
COL4A5-203ENST00000470339 NCBP2-AS2Q69YL0 99 aa15.62■□□□□ 0.09
COL4A5-203ENST00000470339 LRRC31Q6UY01 552 aa15.62■□□□□ 0.09
COL4A5-203ENST00000470339 SEC14L1Q92503 715 aa15.62■□□□□ 0.09
COL4A5-203ENST00000470339 TBC1D31Q96DN5 1066 aa15.62■□□□□ 0.09
COL4A5-203ENST00000470339 ERP44Q9BS26 406 aa15.62■□□□□ 0.09
COL4A5-203ENST00000470339 PARD6BQ9BYG5 372 aa15.62■□□□□ 0.09
COL4A5-203ENST00000470339 ATXN3LQ9H3M9 355 aa15.62■□□□□ 0.09
COL4A5-203ENST00000470339 CATSPERBQ9H7T0 1116 aa15.62■□□□□ 0.09
COL4A5-203ENST00000470339 DZANK1Q9NVP4 752 aa15.62■□□□□ 0.09
COL4A5-203ENST00000470339 LMCD1Q9NZU5 365 aa15.62■□□□□ 0.09
COL4A5-203ENST00000470339 DMGDHQ9UI17 866 aaKnown RBP15.62■□□□□ 0.09
COL4A5-203ENST00000470339 ZNF148Q9UQR1 794 aa15.62■□□□□ 0.09
COL4A5-203ENST00000470339 UTP11Q9Y3A2 253 aaKnown RBP15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms