RNA–Protein interactions for RNA: ENST00000470083.5

LSM2-209, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM2, Length 641 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-209ENST00000470083 KCNJ12Q14500 433 aa12.57□□□□□ -0.4
LSM2-209ENST00000470083 IGF2-ASQ6U949 168 aa12.57□□□□□ -0.4
LSM2-209ENST00000470083 GPRIN1Q7Z2K8 1008 aa12.57□□□□□ -0.4
LSM2-209ENST00000470083 CPXM2Q8N436 756 aa12.57□□□□□ -0.4
LSM2-209ENST00000470083 ZNF276Q8N554 614 aa12.57□□□□□ -0.4
LSM2-209ENST00000470083 EXD3Q8N9H8 876 aa12.57□□□□□ -0.4
LSM2-209ENST00000470083 WFIKKN2Q8TEU8 576 aa12.57□□□□□ -0.4
LSM2-209ENST00000470083 CYB5D2Q8WUJ1 264 aa12.57□□□□□ -0.4
LSM2-209ENST00000470083 XYLT2Q9H1B5 865 aa12.57□□□□□ -0.4
LSM2-209ENST00000470083 PABPC3Q9H361 631 aaKnown RBP12.57□□□□□ -0.4
LSM2-209ENST00000470083 SMYD3Q9H7B4 428 aa12.57□□□□□ -0.4
LSM2-209ENST00000470083 STARD5Q9NSY2 213 aa12.57□□□□□ -0.4
LSM2-209ENST00000470083 AGO1Q9UL18 857 aaKnown RBP12.57□□□□□ -0.4
LSM2-209ENST00000470083 ARID1BQ8NFD5 2236 aaPredicted RBP12.57□□□□□ -0.4
LSM2-209ENST00000470083 RELNP78509 3460 aa12.57□□□□□ -0.4
LSM2-209ENST00000470083 NBPF19A0A087WUL8 3843 aa12.56□□□□□ -0.4
LSM2-209ENST00000470083 LRRC72A6NJI9 287 aa12.56□□□□□ -0.4
LSM2-209ENST00000470083 WNT9AO14904 365 aa12.56□□□□□ -0.4
LSM2-209ENST00000470083 SIGLEC6O43699 453 aa12.56□□□□□ -0.4
LSM2-209ENST00000470083 DLATP10515 647 aaKnown RBP12.56□□□□□ -0.4
LSM2-209ENST00000470083 CCDC130P13994 396 aa12.56□□□□□ -0.4
LSM2-209ENST00000470083 ATICP31939 592 aa12.56□□□□□ -0.4
LSM2-209ENST00000470083 LONP1P36776 959 aaKnown RBP12.56□□□□□ -0.4
LSM2-209ENST00000470083 CCR5P51681 352 aa12.56□□□□□ -0.4
LSM2-209ENST00000470083 ASIC1P78348 528 aa12.56□□□□□ -0.4
LSM2-209ENST00000470083 COG7P83436 770 aa12.56□□□□□ -0.4
LSM2-209ENST00000470083 ZNF211Q13398 564 aaPredicted RBP12.56□□□□□ -0.4
LSM2-209ENST00000470083 SLC45A4Q5BKX6 768 aa12.56□□□□□ -0.4
LSM2-209ENST00000470083 MCTP1Q6DN14 999 aa12.56□□□□□ -0.4
LSM2-209ENST00000470083 XKR5Q6UX68 686 aa12.56□□□□□ -0.4
LSM2-209ENST00000470083 OR2T34Q8NGX1 318 aa12.56□□□□□ -0.4
LSM2-209ENST00000470083 SLC2A14Q8TDB8 520 aa12.56□□□□□ -0.4
LSM2-209ENST00000470083 GANCQ8TET4 914 aa12.56□□□□□ -0.4
LSM2-209ENST00000470083 DDI1Q8WTU0 396 aa12.56□□□□□ -0.4
LSM2-209ENST00000470083 SYAP1Q96A49 352 aaPredicted RBP12.56□□□□□ -0.4
LSM2-209ENST00000470083 DNAJC19Q96DA6 116 aa12.56□□□□□ -0.4
LSM2-209ENST00000470083 CCDC97Q96F63 343 aaPredicted RBP12.56□□□□□ -0.4
LSM2-209ENST00000470083 SERAC1Q96JX3 654 aa12.56□□□□□ -0.4
LSM2-209ENST00000470083 FGFBP2Q9BYJ0 223 aa12.56□□□□□ -0.4
LSM2-209ENST00000470083 RSPH9Q9H1X1 276 aaPredicted RBP12.56□□□□□ -0.4
LSM2-209ENST00000470083 KIAA1586Q9HCI6 787 aa12.56□□□□□ -0.4
LSM2-209ENST00000470083 FBXL12Q9NXK8 326 aa12.56□□□□□ -0.4
LSM2-209ENST00000470083 SERGEFQ9UGK8 458 aa12.56□□□□□ -0.4
LSM2-209ENST00000470083 TPX2Q9ULW0 747 aaKnown RBP12.56□□□□□ -0.4
LSM2-209ENST00000470083 PCDHA5Q9Y5H7 936 aa12.56□□□□□ -0.4
LSM2-209ENST00000470083 TEP1Q99973 2627 aaKnown RBP12.55□□□□□ -0.4
LSM2-209ENST00000470083 TRIM38O00635 465 aa12.55□□□□□ -0.4
LSM2-209ENST00000470083 SUV39H1O43463 412 aa12.55□□□□□ -0.4
LSM2-209ENST00000470083 OPA1O60313 960 aa12.55□□□□□ -0.4
LSM2-209ENST00000470083 CSO75390 466 aaKnown RBP12.55□□□□□ -0.4
LSM2-209ENST00000470083 AFPP02771 609 aaKnown RBP12.55□□□□□ -0.4
LSM2-209ENST00000470083 DLDP09622 509 aaKnown RBP12.55□□□□□ -0.4
LSM2-209ENST00000470083 TNNI1P19237 187 aa12.55□□□□□ -0.4
LSM2-209ENST00000470083 HOXD9P28356 352 aaPredicted RBP12.55□□□□□ -0.4
LSM2-209ENST00000470083 HLA-FP30511 346 aa12.55□□□□□ -0.4
LSM2-209ENST00000470083 PSEN1P49768 467 aa12.55□□□□□ -0.4
LSM2-209ENST00000470083 MYL6P60660 151 aa12.55□□□□□ -0.4
LSM2-209ENST00000470083 SFSWAPQ12872 951 aaKnown RBP12.55□□□□□ -0.4
LSM2-209ENST00000470083 TRPC3Q13507 836 aa12.55□□□□□ -0.4
LSM2-209ENST00000470083 CCDC81Q6ZN84 652 aa12.55□□□□□ -0.4
LSM2-209ENST00000470083 ACOT1Q86TX2 421 aa12.55□□□□□ -0.4
LSM2-209ENST00000470083 SPATS2Q86XZ4 545 aaKnown RBP12.55□□□□□ -0.4
LSM2-209ENST00000470083 DENND1CQ8IV53 801 aa12.55□□□□□ -0.4
LSM2-209ENST00000470083 FAM217AQ8IXS0 508 aa12.55□□□□□ -0.4
LSM2-209ENST00000470083 CDK5RAP1Q96SZ6 601 aaKnown RBP12.55□□□□□ -0.4
LSM2-209ENST00000470083 CGRRF1Q99675 332 aa12.55□□□□□ -0.4
LSM2-209ENST00000470083 GZF1Q9H116 711 aaPredicted RBP12.55□□□□□ -0.4
LSM2-209ENST00000470083 VRTNQ9H8Y1 702 aa12.55□□□□□ -0.4
LSM2-209ENST00000470083 HSPBP1Q9NZL4 362 aa12.55□□□□□ -0.4
LSM2-209ENST00000470083 SUN2Q9UH99 717 aa12.55□□□□□ -0.4
LSM2-209ENST00000470083 NAGPAQ9UK23 515 aa12.55□□□□□ -0.4
LSM2-209ENST00000470083 USP9YO00507 2555 aaPredicted RBP12.55□□□□□ -0.4
LSM2-209ENST00000470083 HHLA1C9JL84 531 aa12.54□□□□□ -0.4
LSM2-209ENST00000470083 LZTS3O60299 673 aaPredicted RBP12.54□□□□□ -0.4
LSM2-209ENST00000470083 HMBSP08397 361 aa12.54□□□□□ -0.4
LSM2-209ENST00000470083 FAM200BP0CF97 657 aa12.54□□□□□ -0.4
LSM2-209ENST00000470083 RALAP11233 206 aa12.54□□□□□ -0.4
LSM2-209ENST00000470083 DAB2P98082 770 aa12.54□□□□□ -0.4
LSM2-209ENST00000470083 PSMD6Q15008 389 aa12.54□□□□□ -0.4
LSM2-209ENST00000470083 SNRNP35Q16560 246 aaKnown RBP12.54□□□□□ -0.4
LSM2-209ENST00000470083 ARL13BQ3SXY8 428 aa12.54□□□□□ -0.4
LSM2-209ENST00000470083 CHST9Q7L1S5 443 aa12.54□□□□□ -0.4
LSM2-209ENST00000470083 SCD5Q86SK9 330 aa12.54□□□□□ -0.4
LSM2-209ENST00000470083 ADIPOR2Q86V24 386 aa12.54□□□□□ -0.4
LSM2-209ENST00000470083 AHI1Q8N157 1196 aa12.54□□□□□ -0.4
LSM2-209ENST00000470083 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.54□□□□□ -0.4
LSM2-209ENST00000470083 MFSD2AQ8NA29 543 aa12.54□□□□□ -0.4
LSM2-209ENST00000470083 NEUROG2Q9H2A3 272 aa12.54□□□□□ -0.4
LSM2-209ENST00000470083 PNPLA8Q9NP80 782 aa12.54□□□□□ -0.4
LSM2-209ENST00000470083 CLIC5Q9NZA1 410 aa12.54□□□□□ -0.4
LSM2-209ENST00000470083 STK17AQ9UEE5 414 aa12.54□□□□□ -0.4
LSM2-209ENST00000470083 RASAL2Q9UJF2 1139 aa12.54□□□□□ -0.4
LSM2-209ENST00000470083 FZD4Q9ULV1 537 aa12.54□□□□□ -0.4
LSM2-209ENST00000470083 A0A1B0GVM2 712 aa12.53□□□□□ -0.4
LSM2-209ENST00000470083 A0A1W2PP55 124 aa12.53□□□□□ -0.4
LSM2-209ENST00000470083 FRMD3A2A2Y4 597 aa12.53□□□□□ -0.4
LSM2-209ENST00000470083 SDC3O75056 442 aa12.53□□□□□ -0.4
LSM2-209ENST00000470083 ATP5BP06576 529 aaKnown RBP12.53□□□□□ -0.4
LSM2-209ENST00000470083 CKMT1AP12532 417 aa12.53□□□□□ -0.4
LSM2-209ENST00000470083 RBMS1P29558 406 aaKnown RBP12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms