RNA–Protein interactions for RNA: ENST00000469585.5

PTCD3-208, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 885 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-208ENST00000469585 C1GALT1C1Q96EU7 318 aa6.87□□□□□ -1.31
PTCD3-208ENST00000469585 TMEM176AQ96HP8 235 aa6.87□□□□□ -1.31
PTCD3-208ENST00000469585 C20orf173Q96LM9 149 aa6.87□□□□□ -1.31
PTCD3-208ENST00000469585 ZNF512Q96ME7 567 aaPredicted RBP6.87□□□□□ -1.31
PTCD3-208ENST00000469585 OR14A2Q96R54 314 aa6.87□□□□□ -1.31
PTCD3-208ENST00000469585 KCNH6Q9H252 994 aa6.87□□□□□ -1.31
PTCD3-208ENST00000469585 HDAC6Q9UBN7 1215 aa6.87□□□□□ -1.31
PTCD3-208ENST00000469585 AJAP1Q9UKB5 411 aaPredicted RBP6.87□□□□□ -1.31
PTCD3-208ENST00000469585 ZFR2Q9UPR6 939 aaKnown RBP6.87□□□□□ -1.31
PTCD3-208ENST00000469585 CYP3A7-CYP3A51PA0A087WV96 503 aa6.86□□□□□ -1.31
PTCD3-208ENST00000469585 MSH4O15457 936 aa6.86□□□□□ -1.31
PTCD3-208ENST00000469585 CTDNEP1O95476 244 aa6.86□□□□□ -1.31
PTCD3-208ENST00000469585 TDP2O95551 362 aa6.86□□□□□ -1.31
PTCD3-208ENST00000469585 FGBP02675 491 aa6.86□□□□□ -1.31
PTCD3-208ENST00000469585 OR52Z1P0C646 297 aa6.86□□□□□ -1.31
PTCD3-208ENST00000469585 CYP2C9P11712 490 aa6.86□□□□□ -1.31
PTCD3-208ENST00000469585 FPR1P21462 350 aa6.86□□□□□ -1.31
PTCD3-208ENST00000469585 CYP3A7P24462 503 aa6.86□□□□□ -1.31
PTCD3-208ENST00000469585 CDK7P50613 346 aa6.86□□□□□ -1.31
PTCD3-208ENST00000469585 SP2Q02086 613 aa6.86□□□□□ -1.31
PTCD3-208ENST00000469585 FOXL1Q12952 345 aa6.86□□□□□ -1.31
PTCD3-208ENST00000469585 FAM214AQ32MH5 1076 aa6.86□□□□□ -1.31
PTCD3-208ENST00000469585 KRT79Q5XKE5 535 aa6.86□□□□□ -1.31
PTCD3-208ENST00000469585 LRRC8DQ7L1W4 858 aa6.86□□□□□ -1.31
PTCD3-208ENST00000469585 CIR1Q86X95 450 aaPredicted RBP6.86□□□□□ -1.31
PTCD3-208ENST00000469585 DRC7Q8IY82 874 aa6.86□□□□□ -1.31
PTCD3-208ENST00000469585 GRAMD1CQ8IYS0 662 aa6.86□□□□□ -1.31
PTCD3-208ENST00000469585 NME8Q8N427 588 aa6.86□□□□□ -1.31
PTCD3-208ENST00000469585 USP38Q8NB14 1042 aa6.86□□□□□ -1.31
PTCD3-208ENST00000469585 IFI44Q8TCB0 444 aa6.86□□□□□ -1.31
PTCD3-208ENST00000469585 ATP8B4Q8TF62 1192 aa6.86□□□□□ -1.31
PTCD3-208ENST00000469585 SNX21Q969T3 373 aa6.86□□□□□ -1.31
PTCD3-208ENST00000469585 ARL8AQ96BM9 186 aa6.86□□□□□ -1.31
PTCD3-208ENST00000469585 CLPTM1LQ96KA5 538 aa6.86□□□□□ -1.31
PTCD3-208ENST00000469585 ACO2Q99798 780 aaKnown RBP6.86□□□□□ -1.31
PTCD3-208ENST00000469585 TRPV6Q9H1D0 765 aa6.86□□□□□ -1.31
PTCD3-208ENST00000469585 ZSCAN16Q9H4T2 348 aaPredicted RBP6.86□□□□□ -1.31
PTCD3-208ENST00000469585 TTC12Q9H892 705 aaPredicted RBP6.86□□□□□ -1.31
PTCD3-208ENST00000469585 TRMT13Q9NUP7 481 aaKnown RBP6.86□□□□□ -1.31
PTCD3-208ENST00000469585 TMEM140Q9NV12 185 aa6.86□□□□□ -1.31
PTCD3-208ENST00000469585 GABBR1Q9UBS5 961 aa6.86□□□□□ -1.31
PTCD3-208ENST00000469585 MYH7BA7E2Y1 1941 aa6.86□□□□□ -1.31
PTCD3-208ENST00000469585 LCTP09848 1927 aa6.86□□□□□ -1.31
PTCD3-208ENST00000469585 KDM3AQ9Y4C1 1321 aa6.85□□□□□ -1.31
PTCD3-208ENST00000469585 IGLV3-22A0A075B6J6 115 aa6.85□□□□□ -1.31
PTCD3-208ENST00000469585 VSTM5A8MXK1 200 aa6.85□□□□□ -1.31
PTCD3-208ENST00000469585 RSPH10B2B2RC85 870 aa6.85□□□□□ -1.31
PTCD3-208ENST00000469585 PATE3B3GLJ2 98 aa6.85□□□□□ -1.31
PTCD3-208ENST00000469585 CTAGE5O15320 804 aa6.85□□□□□ -1.31
PTCD3-208ENST00000469585 ATP9AO75110 1047 aa6.85□□□□□ -1.31
PTCD3-208ENST00000469585 GPR32O75388 356 aa6.85□□□□□ -1.31
PTCD3-208ENST00000469585 BAIAP3O94812 1187 aa6.85□□□□□ -1.31
PTCD3-208ENST00000469585 ALDH2P05091 517 aa6.85□□□□□ -1.31
PTCD3-208ENST00000469585 ITGB3P05106 788 aa6.85□□□□□ -1.31
PTCD3-208ENST00000469585 RSPH10BP0C881 870 aa6.85□□□□□ -1.31
PTCD3-208ENST00000469585 DDCP20711 480 aa6.85□□□□□ -1.31
PTCD3-208ENST00000469585 CYP2C18P33260 490 aa6.85□□□□□ -1.31
PTCD3-208ENST00000469585 QARSP47897 775 aaKnown RBP6.85□□□□□ -1.31
PTCD3-208ENST00000469585 POLGP54098 1239 aaPredicted RBP6.85□□□□□ -1.31
PTCD3-208ENST00000469585 CCL23P55773 120 aa6.85□□□□□ -1.31
PTCD3-208ENST00000469585 PRKCEQ02156 737 aa6.85□□□□□ -1.31
PTCD3-208ENST00000469585 XKR3Q5GH77 459 aa6.85□□□□□ -1.31
PTCD3-208ENST00000469585 FKBP15Q5T1M5 1219 aa6.85□□□□□ -1.31
PTCD3-208ENST00000469585 CCDC181Q5TID7 509 aa6.85□□□□□ -1.31
PTCD3-208ENST00000469585 GLB1LQ6UWU2 654 aa6.85□□□□□ -1.31
PTCD3-208ENST00000469585 DEFB128Q7Z7B8 93 aa6.85□□□□□ -1.31
PTCD3-208ENST00000469585 CYP2W1Q8TAV3 490 aa6.85□□□□□ -1.31
PTCD3-208ENST00000469585 TCP11Q8WWU5 503 aa6.85□□□□□ -1.31
PTCD3-208ENST00000469585 STON2Q8WXE9 905 aa6.85□□□□□ -1.31
PTCD3-208ENST00000469585 SEPT8Q92599 483 aa6.85□□□□□ -1.31
PTCD3-208ENST00000469585 APBB2Q92870 758 aa6.85□□□□□ -1.31
PTCD3-208ENST00000469585 CALML4Q96GE6 196 aa6.85□□□□□ -1.31
PTCD3-208ENST00000469585 CCDC34Q96HJ3 373 aa6.85□□□□□ -1.31
PTCD3-208ENST00000469585 ZNF396Q96N95 335 aaPredicted RBP6.85□□□□□ -1.31
PTCD3-208ENST00000469585 C16orf70Q9BSU1 422 aa6.85□□□□□ -1.31
PTCD3-208ENST00000469585 INO80BQ9C086 356 aaPredicted RBP6.85□□□□□ -1.31
PTCD3-208ENST00000469585 FAM49AQ9H0Q0 323 aaPredicted RBP6.85□□□□□ -1.31
PTCD3-208ENST00000469585 SETD4Q9NVD3 440 aa6.85□□□□□ -1.31
PTCD3-208ENST00000469585 GEMIN8Q9NWZ8 242 aaKnown RBP6.85□□□□□ -1.31
PTCD3-208ENST00000469585 OBP2AQ9NY56 170 aa6.85□□□□□ -1.31
PTCD3-208ENST00000469585 SH3BP1Q9Y3L3 701 aa6.85□□□□□ -1.31
PTCD3-208ENST00000469585 ACTL7AQ9Y615 435 aa6.85□□□□□ -1.31
PTCD3-208ENST00000469585 KAT6AQ92794 2004 aa6.84□□□□□ -1.31
PTCD3-208ENST00000469585 GSTTP1A0A1W2PQM5 241 aa6.84□□□□□ -1.31
PTCD3-208ENST00000469585 H3BML4 177 aa6.84□□□□□ -1.31
PTCD3-208ENST00000469585 HAS3O00219 553 aa6.84□□□□□ -1.31
PTCD3-208ENST00000469585 SLC16A6O15403 523 aa6.84□□□□□ -1.31
PTCD3-208ENST00000469585 PSMD10O75832 226 aa6.84□□□□□ -1.31
PTCD3-208ENST00000469585 CD4P01730 458 aa6.84□□□□□ -1.31
PTCD3-208ENST00000469585 AMHP03971 560 aa6.84□□□□□ -1.31
PTCD3-208ENST00000469585 FDPSP14324 419 aaKnown RBP6.84□□□□□ -1.31
PTCD3-208ENST00000469585 INSRRP14616 1297 aa6.84□□□□□ -1.31
PTCD3-208ENST00000469585 CSF2RAP15509 400 aa6.84□□□□□ -1.31
PTCD3-208ENST00000469585 U2AF2P26368 475 aaKnown RBP eCLIP6.84□□□□□ -1.319e-11■■□□□ 14.2
PTCD3-208ENST00000469585 MSX2P35548 267 aaPredicted RBP6.84□□□□□ -1.31
PTCD3-208ENST00000469585 MAP2K6P52564 334 aa6.84□□□□□ -1.31
PTCD3-208ENST00000469585 ITGB3BPQ13352 177 aaPredicted RBP6.84□□□□□ -1.31
PTCD3-208ENST00000469585 PPP2R5CQ13362 524 aa6.84□□□□□ -1.31
PTCD3-208ENST00000469585 TFDP1Q14186 410 aa6.84□□□□□ -1.31
PTCD3-208ENST00000469585 RAB39AQ14964 217 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms