RNA–Protein interactions for RNA: ENST00000469300.6

LIMS2-213, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 4,807 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-213ENST00000469300 ING2Q9H160 280 aa15.45■□□□□ 0.06
LIMS2-213ENST00000469300 IARS2Q9NSE4 1012 aaKnown RBP15.45■□□□□ 0.06
LIMS2-213ENST00000469300 CHCHD3Q9NX63 227 aaKnown RBP15.45■□□□□ 0.06
LIMS2-213ENST00000469300 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.45■□□□□ 0.06
LIMS2-213ENST00000469300 PYGMP11217 842 aa15.45■□□□□ 0.06
LIMS2-213ENST00000469300 CYP2A6P11509 494 aaPredicted RBP15.45■□□□□ 0.06
LIMS2-213ENST00000469300 H2AFXP16104 143 aaPredicted RBP15.45■□□□□ 0.06
LIMS2-213ENST00000469300 LAG3P18627 525 aa15.45■□□□□ 0.06
LIMS2-213ENST00000469300 HNRNPH3P31942 346 aaKnown RBP15.45■□□□□ 0.06
LIMS2-213ENST00000469300 NAB1Q13506 487 aa15.45■□□□□ 0.06
LIMS2-213ENST00000469300 CHI3L2Q15782 390 aa15.45■□□□□ 0.06
LIMS2-213ENST00000469300 TFAP2DQ7Z6R9 452 aa15.45■□□□□ 0.06
LIMS2-213ENST00000469300 STRA8Q7Z7C7 330 aa15.45■□□□□ 0.06
LIMS2-213ENST00000469300 CELF6Q96J87 481 aaKnown RBP15.45■□□□□ 0.06
LIMS2-213ENST00000469300 ARHGAP28Q9P2N2 729 aa15.45■□□□□ 0.06
LIMS2-213ENST00000469300 OPLAHO14841 1288 aa15.45■□□□□ 0.06
LIMS2-213ENST00000469300 LSP1P33241 339 aa15.45■□□□□ 0.06
LIMS2-213ENST00000469300 CTNNB1P35222 781 aa15.45■□□□□ 0.06
LIMS2-213ENST00000469300 CLK2P49760 499 aaKnown RBP15.45■□□□□ 0.06
LIMS2-213ENST00000469300 MRPS35P82673 323 aaKnown RBP15.45■□□□□ 0.06
LIMS2-213ENST00000469300 KRT72Q14CN4 511 aa15.45■□□□□ 0.06
LIMS2-213ENST00000469300 EIF1ADQ8N9N8 165 aaKnown RBP15.45■□□□□ 0.06
LIMS2-213ENST00000469300 CSGALNACT1Q8TDX6 532 aa15.45■□□□□ 0.06
LIMS2-213ENST00000469300 KAT5Q92993 513 aa15.45■□□□□ 0.06
LIMS2-213ENST00000469300 FUT8Q9BYC5 575 aa15.45■□□□□ 0.06
LIMS2-213ENST00000469300 KDELR1P24390 212 aa15.45■□□□□ 0.06
LIMS2-213ENST00000469300 PPP3CCP48454 512 aa15.45■□□□□ 0.06
LIMS2-213ENST00000469300 AASDHQ4L235 1098 aaPredicted RBP15.45■□□□□ 0.06
LIMS2-213ENST00000469300 KCNT2Q6UVM3 1135 aa15.45■□□□□ 0.06
LIMS2-213ENST00000469300 OR5B17Q8NGF7 314 aa15.45■□□□□ 0.06
LIMS2-213ENST00000469300 ZNF473Q8WTR7 871 aaKnown RBP15.45■□□□□ 0.06
LIMS2-213ENST00000469300 CAVIN3Q969G5 261 aa15.45■□□□□ 0.06
LIMS2-213ENST00000469300 RMDN2Q96LZ7 410 aa15.45■□□□□ 0.06
LIMS2-213ENST00000469300 PAFAH2Q99487 392 aa15.45■□□□□ 0.06
LIMS2-213ENST00000469300 POLR1EQ9GZS1 481 aaKnown RBP15.45■□□□□ 0.06
LIMS2-213ENST00000469300 ZNF7P17097 686 aaPredicted RBP15.44■□□□□ 0.06
LIMS2-213ENST00000469300 CD151P48509 253 aa15.44■□□□□ 0.06
LIMS2-213ENST00000469300 KCNK10P57789 538 aa15.44■□□□□ 0.06
LIMS2-213ENST00000469300 PSMD5Q16401 504 aa15.44■□□□□ 0.06
LIMS2-213ENST00000469300 RARS2Q5T160 578 aaKnown RBP15.44■□□□□ 0.06
LIMS2-213ENST00000469300 POLNQ7Z5Q5 900 aa15.44■□□□□ 0.06
LIMS2-213ENST00000469300 ZNF214Q9UL59 606 aaPredicted RBP15.44■□□□□ 0.06
LIMS2-213ENST00000469300 SPACA6W5XKT8 324 aa15.44■□□□□ 0.06
LIMS2-213ENST00000469300 ZSCAN5CA6NGD5 496 aaPredicted RBP15.44■□□□□ 0.06
LIMS2-213ENST00000469300 EVPLLA8MZ36 301 aa15.44■□□□□ 0.06
LIMS2-213ENST00000469300 RNF103O00237 685 aa15.44■□□□□ 0.06
LIMS2-213ENST00000469300 B4GALT5O43286 388 aa15.44■□□□□ 0.06
LIMS2-213ENST00000469300 SUPT7LO94864 414 aa15.44■□□□□ 0.06
LIMS2-213ENST00000469300 MAPK1P28482 360 aa15.44■□□□□ 0.06
LIMS2-213ENST00000469300 GP5P40197 560 aa15.44■□□□□ 0.06
LIMS2-213ENST00000469300 TNFSF9P41273 254 aa15.44■□□□□ 0.06
LIMS2-213ENST00000469300 AIF1P55008 147 aa15.44■□□□□ 0.06
LIMS2-213ENST00000469300 MAMLD1Q13495 774 aa15.44■□□□□ 0.06
LIMS2-213ENST00000469300 SHROOM1Q2M3G4 852 aaPredicted RBP15.44■□□□□ 0.06
LIMS2-213ENST00000469300 SPANXN3Q5MJ09 141 aa15.44■□□□□ 0.06
LIMS2-213ENST00000469300 ZBTB41Q5SVQ8 909 aa15.44■□□□□ 0.06
LIMS2-213ENST00000469300 ZNF662Q6ZS27 426 aa15.44■□□□□ 0.06
LIMS2-213ENST00000469300 APOL2Q9BQE5 337 aa15.44■□□□□ 0.06
LIMS2-213ENST00000469300 DNAJC18Q9H819 358 aa15.44■□□□□ 0.06
LIMS2-213ENST00000469300 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.44■□□□□ 0.06
LIMS2-213ENST00000469300 IGLV3-22A0A075B6J6 115 aa15.44■□□□□ 0.06
LIMS2-213ENST00000469300 ARL2P36404 184 aa15.44■□□□□ 0.06
LIMS2-213ENST00000469300 BCL2L1Q07817 233 aa15.44■□□□□ 0.06
LIMS2-213ENST00000469300 STX5Q13190 355 aa15.44■□□□□ 0.06
LIMS2-213ENST00000469300 APLFQ8IW19 511 aaPredicted RBP15.44■□□□□ 0.06
LIMS2-213ENST00000469300 LPCAT1Q8NF37 534 aa15.44■□□□□ 0.06
LIMS2-213ENST00000469300 C1QTNF7Q9BXJ2 289 aa15.44■□□□□ 0.06
LIMS2-213ENST00000469300 RAD18Q9NS91 495 aa15.44■□□□□ 0.06
LIMS2-213ENST00000469300 OR12D3Q9UGF7 316 aa15.44■□□□□ 0.06
LIMS2-213ENST00000469300 RAD54BQ9Y620 910 aa15.44■□□□□ 0.06
LIMS2-213ENST00000469300 GOLGA8TH3BQL2 631 aa15.43■□□□□ 0.06
LIMS2-213ENST00000469300 CAMK2GQ13555 558 aaPredicted RBP15.43■□□□□ 0.06
LIMS2-213ENST00000469300 PARP6Q2NL67 630 aa15.43■□□□□ 0.06
LIMS2-213ENST00000469300 RBBP8Q99708 897 aa15.43■□□□□ 0.06
LIMS2-213ENST00000469300 STX18Q9P2W9 335 aaKnown RBP15.43■□□□□ 0.06
LIMS2-213ENST00000469300 MARCOQ9UEW3 520 aaPredicted RBP15.43■□□□□ 0.06
LIMS2-213ENST00000469300 DMGDHQ9UI17 866 aaKnown RBP15.43■□□□□ 0.06
LIMS2-213ENST00000469300 EIF3LQ9Y262 564 aaKnown RBP15.43■□□□□ 0.06
LIMS2-213ENST00000469300 FAM32AQ9Y421 112 aaKnown RBP15.43■□□□□ 0.06
LIMS2-213ENST00000469300 ENDOD1O94919 500 aa15.43■□□□□ 0.06
LIMS2-213ENST00000469300 FGF19O95750 216 aa15.43■□□□□ 0.06
LIMS2-213ENST00000469300 ASGR1P07306 291 aa15.43■□□□□ 0.06
LIMS2-213ENST00000469300 RARAP10276 462 aa15.43■□□□□ 0.06
LIMS2-213ENST00000469300 ELNP15502 786 aa15.43■□□□□ 0.06
LIMS2-213ENST00000469300 CDH2P19022 906 aaPredicted RBP15.43■□□□□ 0.06
LIMS2-213ENST00000469300 CYP3A5P20815 502 aa15.43■□□□□ 0.06
LIMS2-213ENST00000469300 POU5F1Q01860 360 aaKnown RBP15.43■□□□□ 0.06
LIMS2-213ENST00000469300 PDPK2PQ6A1A2 396 aa15.43■□□□□ 0.06
LIMS2-213ENST00000469300 VSTM1Q6UX27 236 aa15.43■□□□□ 0.06
LIMS2-213ENST00000469300 RGS9BPQ6ZS82 235 aa15.43■□□□□ 0.06
LIMS2-213ENST00000469300 SLC22A9Q8IVM8 553 aa15.43■□□□□ 0.06
LIMS2-213ENST00000469300 TNIP2Q8NFZ5 429 aa15.43■□□□□ 0.06
LIMS2-213ENST00000469300 SYNDIG1Q9H7V2 258 aa15.43■□□□□ 0.06
LIMS2-213ENST00000469300 KIF17Q9P2E2 1029 aa15.43■□□□□ 0.06
LIMS2-213ENST00000469300 KCPQ6ZWJ8 1503 aa15.43■□□□□ 0.06
LIMS2-213ENST00000469300 XPO1O14980 1071 aaKnown RBP15.43■□□□□ 0.06
LIMS2-213ENST00000469300 PGAM1P18669 254 aa15.43■□□□□ 0.06
LIMS2-213ENST00000469300 HDCP19113 662 aa15.43■□□□□ 0.06
LIMS2-213ENST00000469300 TMED10P49755 219 aaKnown RBP15.43■□□□□ 0.06
LIMS2-213ENST00000469300 PRKAA2P54646 552 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms