RNA–Protein interactions for RNA: ENST00000469054.1

VPS13D-204, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-204ENST00000469054 FBXL6Q8N531 539 aa12.39□□□□□ -0.43
VPS13D-204ENST00000469054 NAT16Q8N8M0 369 aa12.39□□□□□ -0.43
VPS13D-204ENST00000469054 FNIP1Q8TF40 1166 aa12.39□□□□□ -0.43
VPS13D-204ENST00000469054 DDI1Q8WTU0 396 aa12.39□□□□□ -0.43
VPS13D-204ENST00000469054 FAM172AQ8WUF8 416 aa12.39□□□□□ -0.43
VPS13D-204ENST00000469054 TMA16Q96EY4 203 aaKnown RBP12.39□□□□□ -0.43
VPS13D-204ENST00000469054 P2RY11Q96G91 374 aa12.39□□□□□ -0.43
VPS13D-204ENST00000469054 XPO6Q96QU8 1125 aaKnown RBP12.39□□□□□ -0.43
VPS13D-204ENST00000469054 P2RY13Q9BPV8 354 aa12.39□□□□□ -0.43
VPS13D-204ENST00000469054 CNPY3Q9BT09 278 aa12.39□□□□□ -0.43
VPS13D-204ENST00000469054 PACSIN1Q9BY11 444 aa12.39□□□□□ -0.43
VPS13D-204ENST00000469054 OSBPL6Q9BZF3 934 aa12.39□□□□□ -0.43
VPS13D-204ENST00000469054 IRX2Q9BZI1 471 aaPredicted RBP12.39□□□□□ -0.43
VPS13D-204ENST00000469054 TKTL2Q9H0I9 626 aa12.39□□□□□ -0.43
VPS13D-204ENST00000469054 FBRSL1Q9HCM7 1045 aaKnown RBP12.39□□□□□ -0.43
VPS13D-204ENST00000469054 PLK2Q9NYY3 685 aa12.39□□□□□ -0.43
VPS13D-204ENST00000469054 NDRG2Q9UN36 371 aaKnown RBP12.39□□□□□ -0.43
VPS13D-204ENST00000469054 MTF2Q9Y483 593 aaPredicted RBP12.39□□□□□ -0.43
VPS13D-204ENST00000469054 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.38□□□□□ -0.43
VPS13D-204ENST00000469054 NCAM2O15394 837 aa12.38□□□□□ -0.43
VPS13D-204ENST00000469054 CCP110O43303 1012 aa12.38□□□□□ -0.43
VPS13D-204ENST00000469054 CACNG3O60359 315 aa12.38□□□□□ -0.43
VPS13D-204ENST00000469054 TSPAN3O60637 253 aa12.38□□□□□ -0.43
VPS13D-204ENST00000469054 PAGE1O75459 146 aa12.38□□□□□ -0.43
VPS13D-204ENST00000469054 TMEM253P0C7T8 217 aa12.38□□□□□ -0.43
VPS13D-204ENST00000469054 DESP17661 470 aa12.38□□□□□ -0.43
VPS13D-204ENST00000469054 AOC1P19801 751 aa12.38□□□□□ -0.43
VPS13D-204ENST00000469054 PSMA2P25787 234 aa12.38□□□□□ -0.43
VPS13D-204ENST00000469054 CYLC1P35663 651 aaPredicted RBP12.38□□□□□ -0.43
VPS13D-204ENST00000469054 EIF2DP41214 584 aaKnown RBP12.38□□□□□ -0.43
VPS13D-204ENST00000469054 SLC6A11P48066 632 aa12.38□□□□□ -0.43
VPS13D-204ENST00000469054 HDAC4P56524 1084 aa12.38□□□□□ -0.43
VPS13D-204ENST00000469054 GRSF1Q12849 480 aaKnown RBP eCLIP12.38□□□□□ -0.43
VPS13D-204ENST00000469054 RAB6CQ53S08 254 aa12.38□□□□□ -0.43
VPS13D-204ENST00000469054 TMEM196Q5HYL7 178 aa12.38□□□□□ -0.43
VPS13D-204ENST00000469054 MS4A13Q5J8X5 152 aa12.38□□□□□ -0.43
VPS13D-204ENST00000469054 C10orf76Q5T2E6 689 aa12.38□□□□□ -0.43
VPS13D-204ENST00000469054 RAP1GAP2Q684P5 730 aa12.38□□□□□ -0.43
VPS13D-204ENST00000469054 ASTLQ6HA08 431 aaPredicted RBP12.38□□□□□ -0.43
VPS13D-204ENST00000469054 RFWD3Q6PCD5 774 aa12.38□□□□□ -0.43
VPS13D-204ENST00000469054 CHSY1Q86X52 802 aa12.38□□□□□ -0.43
VPS13D-204ENST00000469054 FAM131BQ86XD5 332 aa12.38□□□□□ -0.43
VPS13D-204ENST00000469054 SUGP1Q8IWZ8 645 aaKnown RBP12.38□□□□□ -0.43
VPS13D-204ENST00000469054 ZNF687Q8N1G0 1237 aa12.38□□□□□ -0.43
VPS13D-204ENST00000469054 PJA1Q8NG27 643 aa12.38□□□□□ -0.43
VPS13D-204ENST00000469054 CTNNBL1Q8WYA6 563 aaPredicted RBP12.38□□□□□ -0.43
VPS13D-204ENST00000469054 BHMTQ93088 406 aa12.38□□□□□ -0.43
VPS13D-204ENST00000469054 ARHGEF26Q96DR7 871 aa12.38□□□□□ -0.43
VPS13D-204ENST00000469054 PRMT1Q99873 361 aaKnown RBP12.38□□□□□ -0.43
VPS13D-204ENST00000469054 BAG1Q99933 345 aaPredicted RBP12.38□□□□□ -0.43
VPS13D-204ENST00000469054 RAB6CQ9H0N0 254 aa12.38□□□□□ -0.43
VPS13D-204ENST00000469054 ANLNQ9NQW6 1124 aa12.38□□□□□ -0.43
VPS13D-204ENST00000469054 DEC1Q9P2X7 70 aa12.38□□□□□ -0.43
VPS13D-204ENST00000469054 FBXO10Q9UK96 956 aa12.38□□□□□ -0.43
VPS13D-204ENST00000469054 SIT1Q9Y3P8 196 aa12.38□□□□□ -0.43
VPS13D-204ENST00000469054 EPN1Q9Y6I3 576 aaPredicted RBP12.38□□□□□ -0.43
VPS13D-204ENST00000469054 SOWAHDA6NJG2 315 aa12.37□□□□□ -0.43
VPS13D-204ENST00000469054 I6L893 689 aaPredicted RBP12.37□□□□□ -0.43
VPS13D-204ENST00000469054 PI15O43692 258 aa12.37□□□□□ -0.43
VPS13D-204ENST00000469054 TULP3O75386 442 aa12.37□□□□□ -0.43
VPS13D-204ENST00000469054 LCA5LO95447 670 aa12.37□□□□□ -0.43
VPS13D-204ENST00000469054 CHRNB1P11230 501 aa12.37□□□□□ -0.43
VPS13D-204ENST00000469054 TACR2P21452 398 aa12.37□□□□□ -0.43
VPS13D-204ENST00000469054 DRD1P21728 446 aa12.37□□□□□ -0.43
VPS13D-204ENST00000469054 MRE11P49959 708 aa12.37□□□□□ -0.43
VPS13D-204ENST00000469054 SGSHP51688 502 aa12.37□□□□□ -0.43
VPS13D-204ENST00000469054 GSDMDP57764 484 aa12.37□□□□□ -0.43
VPS13D-204ENST00000469054 FZD5Q13467 585 aa12.37□□□□□ -0.43
VPS13D-204ENST00000469054 SPA17Q15506 151 aa12.37□□□□□ -0.43
VPS13D-204ENST00000469054 ARL13BQ3SXY8 428 aa12.37□□□□□ -0.43
VPS13D-204ENST00000469054 PREPLQ4J6C6 727 aaPredicted RBP12.37□□□□□ -0.43
VPS13D-204ENST00000469054 MPP7Q5T2T1 576 aa12.37□□□□□ -0.43
VPS13D-204ENST00000469054 ACBD5Q5T8D3 534 aaPredicted RBP12.37□□□□□ -0.43
VPS13D-204ENST00000469054 FSTL4Q6MZW2 842 aa12.37□□□□□ -0.43
VPS13D-204ENST00000469054 CCDC105Q8IYK2 499 aa12.37□□□□□ -0.43
VPS13D-204ENST00000469054 LGI2Q8N0V4 545 aa12.37□□□□□ -0.43
VPS13D-204ENST00000469054 MYEOVQ96EZ4 313 aa12.37□□□□□ -0.43
VPS13D-204ENST00000469054 C1orf74Q96LT6 269 aa12.37□□□□□ -0.43
VPS13D-204ENST00000469054 HAPLN3Q96S86 360 aa12.37□□□□□ -0.43
VPS13D-204ENST00000469054 PNKPQ96T60 521 aa12.37□□□□□ -0.43
VPS13D-204ENST00000469054 LRFN3Q9BTN0 628 aa12.37□□□□□ -0.43
VPS13D-204ENST00000469054 NUP85Q9BW27 656 aa12.37□□□□□ -0.43
VPS13D-204ENST00000469054 TRIM7Q9C029 511 aa12.37□□□□□ -0.43
VPS13D-204ENST00000469054 SIK2Q9H0K1 926 aa12.37□□□□□ -0.43
VPS13D-204ENST00000469054 LMAN1LQ9HAT1 526 aa12.37□□□□□ -0.43
VPS13D-204ENST00000469054 DNAJC17Q9NVM6 304 aaKnown RBP12.37□□□□□ -0.43
VPS13D-204ENST00000469054 INTUQ9ULD6 942 aa12.37□□□□□ -0.43
VPS13D-204ENST00000469054 HS3ST4Q9Y661 456 aa12.37□□□□□ -0.43
VPS13D-204ENST00000469054 KIF26AQ9ULI4 1882 aaPredicted RBP12.36□□□□□ -0.43
VPS13D-204ENST00000469054 F5P12259 2224 aa12.36□□□□□ -0.43
VPS13D-204ENST00000469054 A0A0A0MRY4 1105 aa12.36□□□□□ -0.43
VPS13D-204ENST00000469054 TYW5A2RUC4 315 aaKnown RBP12.36□□□□□ -0.43
VPS13D-204ENST00000469054 EIF3CLB5ME19 914 aaKnown RBP12.36□□□□□ -0.43
VPS13D-204ENST00000469054 F5H5T6 163 aa12.36□□□□□ -0.43
VPS13D-204ENST00000469054 MYO1FO00160 1098 aa12.36□□□□□ -0.43
VPS13D-204ENST00000469054 TBL1XO60907 577 aa12.36□□□□□ -0.43
VPS13D-204ENST00000469054 RNF8O76064 485 aa12.36□□□□□ -0.43
VPS13D-204ENST00000469054 EGFP01133 1207 aa12.36□□□□□ -0.43
VPS13D-204ENST00000469054 APODP05090 189 aa12.36□□□□□ -0.43
VPS13D-204ENST00000469054 DCNP07585 359 aaKnown RBP12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms