RNA–Protein interactions for RNA: ENST00000468653.5

SMC4-209, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,756 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-209ENST00000468653 DCLK1O15075 740 aa19.6■□□□□ 0.73
SMC4-209ENST00000468653 MFSD11O43934 449 aa19.6■□□□□ 0.73
SMC4-209ENST00000468653 PAGE1O75459 146 aa19.6■□□□□ 0.73
SMC4-209ENST00000468653 LRIG2O94898 1065 aa19.6■□□□□ 0.73
SMC4-209ENST00000468653 TBX18O95935 607 aa19.6■□□□□ 0.73
SMC4-209ENST00000468653 MOCS2O96007 188 aaPredicted RBP19.6■□□□□ 0.73
SMC4-209ENST00000468653 LINC00271P0C7V0 271 aa19.6■□□□□ 0.73
SMC4-209ENST00000468653 EPHB2P29323 1055 aa19.6■□□□□ 0.73
SMC4-209ENST00000468653 GGCXP38435 758 aa19.6■□□□□ 0.73
SMC4-209ENST00000468653 SLMAPQ14BN4 828 aa19.6■□□□□ 0.73
SMC4-209ENST00000468653 VEPH1Q14D04 833 aa19.6■□□□□ 0.73
SMC4-209ENST00000468653 PAFAH1B3Q15102 231 aaKnown RBP19.6■□□□□ 0.73
SMC4-209ENST00000468653 HIBCHQ6NVY1 386 aaPredicted RBP19.6■□□□□ 0.73
SMC4-209ENST00000468653 CCDC33Q8N5R6 958 aa19.6■□□□□ 0.73
SMC4-209ENST00000468653 ZNF512Q96ME7 567 aaPredicted RBP19.6■□□□□ 0.73
SMC4-209ENST00000468653 LBHD1Q9BQE6 289 aaPredicted RBP19.6■□□□□ 0.73
SMC4-209ENST00000468653 TXLNGYQ9BZA5 131 aa19.6■□□□□ 0.73
SMC4-209ENST00000468653 ZBP1Q9H171 429 aa19.6■□□□□ 0.73
SMC4-209ENST00000468653 MTIF3Q9H2K0 278 aaKnown RBP19.6■□□□□ 0.73
SMC4-209ENST00000468653 ADAM7Q9H2U9 754 aa19.6■□□□□ 0.73
SMC4-209ENST00000468653 USP29Q9HBJ7 922 aa19.6■□□□□ 0.73
SMC4-209ENST00000468653 TEX28O15482 410 aa19.59■□□□□ 0.73
SMC4-209ENST00000468653 ZDHHC11BP0C7U3 371 aa19.59■□□□□ 0.73
SMC4-209ENST00000468653 SRGAP2BP0DMP2 458 aa19.59■□□□□ 0.73
SMC4-209ENST00000468653 CTSAP10619 480 aa19.59■□□□□ 0.73
SMC4-209ENST00000468653 PMS2P54278 862 aa19.59■□□□□ 0.73
SMC4-209ENST00000468653 HSP90B2PQ58FF3 399 aa19.59■□□□□ 0.73
SMC4-209ENST00000468653 PCGF5Q86SE9 256 aa19.59■□□□□ 0.73
SMC4-209ENST00000468653 MIB1Q86YT6 1006 aa19.59■□□□□ 0.73
SMC4-209ENST00000468653 PDZD8Q8NEN9 1154 aa19.59■□□□□ 0.73
SMC4-209ENST00000468653 QKIQ96PU8 341 aaKnown RBP eCLIP19.59■□□□□ 0.737e-7■■■■■ 232.7
SMC4-209ENST00000468653 MARCH2Q9P0N8 246 aa19.59■□□□□ 0.73
SMC4-209ENST00000468653 ZNF638Q14966 1978 aaKnown RBP19.59■□□□□ 0.73
SMC4-209ENST00000468653 KIAA1671Q9BY89 1806 aa19.59■□□□□ 0.73
SMC4-209ENST00000468653 GREB1Q4ZG55 1949 aa19.58■□□□□ 0.73
SMC4-209ENST00000468653 KCNU1A8MYU2 1149 aa19.58■□□□□ 0.73
SMC4-209ENST00000468653 HACD1B0YJ81 288 aa19.58■□□□□ 0.73
SMC4-209ENST00000468653 TLR5O60602 858 aa19.58■□□□□ 0.73
SMC4-209ENST00000468653 LILRB3O75022 631 aa19.58■□□□□ 0.73
SMC4-209ENST00000468653 APOEP02649 317 aa19.58■□□□□ 0.73
SMC4-209ENST00000468653 MORF4L2Q15014 288 aa19.58■□□□□ 0.73
SMC4-209ENST00000468653 PDK1Q15118 436 aa19.58■□□□□ 0.73
SMC4-209ENST00000468653 RWDD4Q6NW29 188 aaKnown RBP19.58■□□□□ 0.73
SMC4-209ENST00000468653 IQCKQ8N0W5 287 aa19.58■□□□□ 0.73
SMC4-209ENST00000468653 SP7Q8TDD2 431 aaPredicted RBP19.58■□□□□ 0.73
SMC4-209ENST00000468653 LRRN4Q8WUT4 740 aa19.58■□□□□ 0.73
SMC4-209ENST00000468653 TFB1MQ8WVM0 346 aaKnown RBP19.58■□□□□ 0.73
SMC4-209ENST00000468653 OVCA2Q8WZ82 227 aa19.58■□□□□ 0.73
SMC4-209ENST00000468653 SLC39A13Q96H72 371 aa19.58■□□□□ 0.73
SMC4-209ENST00000468653 FCRL2Q96LA5 508 aaPredicted RBP19.58■□□□□ 0.73
SMC4-209ENST00000468653 CDK5RAP1Q96SZ6 601 aaKnown RBP19.58■□□□□ 0.73
SMC4-209ENST00000468653 RXFP1Q9HBX9 757 aa19.58■□□□□ 0.73
SMC4-209ENST00000468653 SLC12A6Q9UHW9 1150 aa19.58■□□□□ 0.73
SMC4-209ENST00000468653 MAFFQ9ULX9 164 aa19.58■□□□□ 0.73
SMC4-209ENST00000468653 CHKAP35790 457 aa19.57■□□□□ 0.72
SMC4-209ENST00000468653 NRLP54845 237 aa19.57■□□□□ 0.72
SMC4-209ENST00000468653 TRIP4Q15650 581 aaPredicted RBP19.57■□□□□ 0.72
SMC4-209ENST00000468653 UAP1Q16222 522 aaPredicted RBP19.57■□□□□ 0.72
SMC4-209ENST00000468653 SPDYCQ5MJ68 293 aa19.57■□□□□ 0.72
SMC4-209ENST00000468653 HEATR6Q6AI08 1181 aaKnown RBP19.57■□□□□ 0.72
SMC4-209ENST00000468653 TMC7Q7Z402 723 aa19.57■□□□□ 0.72
SMC4-209ENST00000468653 TAB3Q8N5C8 712 aaPredicted RBP19.57■□□□□ 0.72
SMC4-209ENST00000468653 RTP4Q96DX8 246 aa19.57■□□□□ 0.72
SMC4-209ENST00000468653 OLFM3Q96PB7 478 aa19.57■□□□□ 0.72
SMC4-209ENST00000468653 ZIM3Q96PE6 472 aa19.57■□□□□ 0.72
SMC4-209ENST00000468653 CCSER2Q9H7U1 834 aa19.57■□□□□ 0.72
SMC4-209ENST00000468653 PAK5Q9P286 719 aa19.57■□□□□ 0.72
SMC4-209ENST00000468653 PLAAQ9Y263 795 aa19.57■□□□□ 0.72
SMC4-209ENST00000468653 SLC12A8A0AV02 714 aa19.57■□□□□ 0.72
SMC4-209ENST00000468653 LCHNA4D1U4 455 aa19.57■□□□□ 0.72
SMC4-209ENST00000468653 PPP1R12AO14974 1030 aaPredicted RBP19.57■□□□□ 0.72
SMC4-209ENST00000468653 CXCL14O95715 111 aa19.57■□□□□ 0.72
SMC4-209ENST00000468653 HMGA1P17096 107 aaKnown RBP19.57■□□□□ 0.72
SMC4-209ENST00000468653 HTR7P34969 479 aa19.57■□□□□ 0.72
SMC4-209ENST00000468653 CTNNB1P35222 781 aa19.57■□□□□ 0.72
SMC4-209ENST00000468653 TWF1Q12792 350 aa19.57■□□□□ 0.72
SMC4-209ENST00000468653 RNASEH2BQ5TBB1 312 aaKnown RBP19.57■□□□□ 0.72
SMC4-209ENST00000468653 TADA2BQ86TJ2 420 aa19.57■□□□□ 0.72
SMC4-209ENST00000468653 PPIL6Q8IXY8 311 aa19.57■□□□□ 0.72
SMC4-209ENST00000468653 TCEAL8Q8IYN2 117 aa19.57■□□□□ 0.72
SMC4-209ENST00000468653 ATP6V0D2Q8N8Y2 350 aa19.57■□□□□ 0.72
SMC4-209ENST00000468653 FERMT1Q9BQL6 677 aa19.57■□□□□ 0.72
SMC4-209ENST00000468653 FOXP3Q9BZS1 431 aa19.57■□□□□ 0.72
SMC4-209ENST00000468653 RAD54BQ9Y620 910 aa19.57■□□□□ 0.72
SMC4-209ENST00000468653 AGPSO00116 658 aa19.56■□□□□ 0.72
SMC4-209ENST00000468653 CNPP09543 421 aaKnown RBP19.56■□□□□ 0.72
SMC4-209ENST00000468653 SERPINB6P35237 376 aa19.56■□□□□ 0.72
SMC4-209ENST00000468653 EPHB3P54753 998 aa19.56■□□□□ 0.72
SMC4-209ENST00000468653 BASP1P80723 227 aaKnown RBP19.56■□□□□ 0.72
SMC4-209ENST00000468653 CEP128Q6ZU80 1094 aa19.56■□□□□ 0.72
SMC4-209ENST00000468653 ZCCHC9Q8N567 271 aaKnown RBP19.56■□□□□ 0.72
SMC4-209ENST00000468653 GOLGA6L1Q8N7Z2 621 aa19.56■□□□□ 0.72
SMC4-209ENST00000468653 NETO2Q8NC67 525 aa19.56■□□□□ 0.72
SMC4-209ENST00000468653 CCNYQ8ND76 341 aa19.56■□□□□ 0.72
SMC4-209ENST00000468653 TBC1D31Q96DN5 1066 aa19.56■□□□□ 0.72
SMC4-209ENST00000468653 NACA2Q9H009 215 aa19.56■□□□□ 0.72
SMC4-209ENST00000468653 MED4Q9NPJ6 270 aa19.56■□□□□ 0.72
SMC4-209ENST00000468653 TRPM5Q9NZQ8 1165 aa19.56■□□□□ 0.72
SMC4-209ENST00000468653 XPO7Q9UIA9 1087 aaKnown RBP19.56■□□□□ 0.72
SMC4-209ENST00000468653 SHOC2Q9UQ13 582 aa19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms