RNA–Protein interactions for RNA: ENST00000468253.1

NPHP4-206, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 781 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-206ENST00000468253 E2F5Q15329 346 aa20.76■□□□□ 0.91
NPHP4-206ENST00000468253 TSR1Q2NL82 804 aaKnown RBP20.76■□□□□ 0.91
NPHP4-206ENST00000468253 MS4A13Q5J8X5 152 aa20.76■□□□□ 0.91
NPHP4-206ENST00000468253 Q6ZS52 159 aa20.76■□□□□ 0.91
NPHP4-206ENST00000468253 GAS2L3Q86XJ1 694 aa20.76■□□□□ 0.91
NPHP4-206ENST00000468253 TERB1Q8NA31 727 aa20.76■□□□□ 0.91
NPHP4-206ENST00000468253 RXFP2Q8WXD0 754 aa20.76■□□□□ 0.91
NPHP4-206ENST00000468253 CENPIQ92674 756 aaPredicted RBP20.76■□□□□ 0.91
NPHP4-206ENST00000468253 C1orf74Q96LT6 269 aa20.76■□□□□ 0.91
NPHP4-206ENST00000468253 DNAJC7Q99615 494 aa20.76■□□□□ 0.91
NPHP4-206ENST00000468253 SELENOOQ9BVL4 669 aa20.76■□□□□ 0.91
NPHP4-206ENST00000468253 ISCUQ9H1K1 167 aa20.76■□□□□ 0.91
NPHP4-206ENST00000468253 ARHGEF38Q9NXL2 777 aa20.76■□□□□ 0.91
NPHP4-206ENST00000468253 TAS2R14Q9NYV8 317 aa20.76■□□□□ 0.91
NPHP4-206ENST00000468253 PLK2Q9NYY3 685 aa20.76■□□□□ 0.91
NPHP4-206ENST00000468253 GOLGA6L7A0A1B0GV03 622 aa20.75■□□□□ 0.91
NPHP4-206ENST00000468253 TSPAN3O60637 253 aa20.75■□□□□ 0.91
NPHP4-206ENST00000468253 HOXD9P28356 352 aaPredicted RBP20.75■□□□□ 0.91
NPHP4-206ENST00000468253 SLC6A4P31645 630 aa20.75■□□□□ 0.91
NPHP4-206ENST00000468253 RFC1P35251 1148 aaPredicted RBP20.75■□□□□ 0.91
NPHP4-206ENST00000468253 KIR2DL1P43626 348 aaPredicted RBP20.75■□□□□ 0.91
NPHP4-206ENST00000468253 SULT1E1P49888 294 aa20.75■□□□□ 0.91
NPHP4-206ENST00000468253 NRLP54845 237 aa20.75■□□□□ 0.91
NPHP4-206ENST00000468253 DEUP1Q05D60 604 aa20.75■□□□□ 0.91
NPHP4-206ENST00000468253 PPP1R15BQ5SWA1 713 aa20.75■□□□□ 0.91
NPHP4-206ENST00000468253 OTUD1Q5VV17 481 aaPredicted RBP20.75■□□□□ 0.91
NPHP4-206ENST00000468253 TRNP1Q6NT89 227 aa20.75■□□□□ 0.91
NPHP4-206ENST00000468253 SYT13Q7L8C5 426 aa20.75■□□□□ 0.91
NPHP4-206ENST00000468253 NELL1Q92832 810 aa20.75■□□□□ 0.91
NPHP4-206ENST00000468253 ACDQ96AP0 544 aa20.75■□□□□ 0.91
NPHP4-206ENST00000468253 TBCBQ99426 244 aa20.75■□□□□ 0.91
NPHP4-206ENST00000468253 PRMT1Q99873 361 aaKnown RBP20.75■□□□□ 0.91
NPHP4-206ENST00000468253 ADAM33Q9BZ11 813 aa20.75■□□□□ 0.91
NPHP4-206ENST00000468253 METTL5Q9NRN9 209 aaKnown RBP20.75■□□□□ 0.91
NPHP4-206ENST00000468253 PIGVQ9NUD9 493 aa20.75■□□□□ 0.91
NPHP4-206ENST00000468253 PARVAQ9NVD7 372 aa20.75■□□□□ 0.91
NPHP4-206ENST00000468253 CALCOCO1Q9P1Z2 691 aa20.75■□□□□ 0.91
NPHP4-206ENST00000468253 ADAMTS1Q9UHI8 967 aa20.75■□□□□ 0.91
NPHP4-206ENST00000468253 AP5Z1O43299 807 aa20.74■□□□□ 0.91
NPHP4-206ENST00000468253 SP9P0CG40 484 aa20.74■□□□□ 0.91
NPHP4-206ENST00000468253 MYBL1P10243 752 aa20.74■□□□□ 0.91
NPHP4-206ENST00000468253 CHRM1P11229 460 aaPredicted RBP20.74■□□□□ 0.91
NPHP4-206ENST00000468253 SDC4P31431 198 aa20.74■□□□□ 0.91
NPHP4-206ENST00000468253 TBX2Q13207 712 aaPredicted RBP20.74■□□□□ 0.91
NPHP4-206ENST00000468253 CCDC14Q49A88 953 aa20.74■□□□□ 0.91
NPHP4-206ENST00000468253 PLEKHA7Q6IQ23 1121 aa20.74■□□□□ 0.91
NPHP4-206ENST00000468253 DNAJC24Q6P3W2 148 aa20.74■□□□□ 0.91
NPHP4-206ENST00000468253 RFWD3Q6PCD5 774 aa20.74■□□□□ 0.91
NPHP4-206ENST00000468253 WDR59Q6PJI9 974 aa20.74■□□□□ 0.91
NPHP4-206ENST00000468253 STRADAQ7RTN6 431 aa20.74■□□□□ 0.91
NPHP4-206ENST00000468253 KIAA0907Q7Z7F0 614 aaPredicted RBP20.74■□□□□ 0.91
NPHP4-206ENST00000468253 PHLDB2Q86SQ0 1253 aa20.74■□□□□ 0.91
NPHP4-206ENST00000468253 HJURPQ8NCD3 748 aaPredicted RBP20.74■□□□□ 0.91
NPHP4-206ENST00000468253 BHMTQ93088 406 aa20.74■□□□□ 0.91
NPHP4-206ENST00000468253 TRIM11Q96F44 468 aa20.74■□□□□ 0.91
NPHP4-206ENST00000468253 HAPLN3Q96S86 360 aa20.74■□□□□ 0.91
NPHP4-206ENST00000468253 ZNHIT6Q9NWK9 470 aaKnown RBP20.74■□□□□ 0.91
NPHP4-206ENST00000468253 SYNJ2BP-COX16A0A087WUM0 186 aa20.73■□□□□ 0.91
NPHP4-206ENST00000468253 TYW5A2RUC4 315 aaKnown RBP20.73■□□□□ 0.91
NPHP4-206ENST00000468253 ANKRD62A6NC57 917 aa20.73■□□□□ 0.91
NPHP4-206ENST00000468253 H0Y858 1186 aa20.73■□□□□ 0.91
NPHP4-206ENST00000468253 NPC1O15118 1278 aa20.73■□□□□ 0.91
NPHP4-206ENST00000468253 TRIM24O15164 1050 aa20.73■□□□□ 0.91
NPHP4-206ENST00000468253 MOCS2O96007 188 aaPredicted RBP20.73■□□□□ 0.91
NPHP4-206ENST00000468253 TFE3P19532 575 aaPredicted RBP20.73■□□□□ 0.91
NPHP4-206ENST00000468253 TACR2P21452 398 aa20.73■□□□□ 0.91
NPHP4-206ENST00000468253 RRM1P23921 792 aa20.73■□□□□ 0.91
NPHP4-206ENST00000468253 RDXP35241 583 aaKnown RBP20.73■□□□□ 0.91
NPHP4-206ENST00000468253 CSTF1Q05048 431 aaKnown RBP20.73■□□□□ 0.91
NPHP4-206ENST00000468253 MAMLD1Q13495 774 aa20.73■□□□□ 0.91
NPHP4-206ENST00000468253 C5orf22Q49AR2 442 aa20.73■□□□□ 0.91
NPHP4-206ENST00000468253 TDRD12Q587J7 1177 aaKnown RBP20.73■□□□□ 0.91
NPHP4-206ENST00000468253 TRMT11Q7Z4G4 463 aaKnown RBP20.73■□□□□ 0.91
NPHP4-206ENST00000468253 CAMKK1Q8N5S9 505 aa20.73■□□□□ 0.91
NPHP4-206ENST00000468253 EMC1Q8N766 993 aa20.73■□□□□ 0.91
NPHP4-206ENST00000468253 DDX51Q8N8A6 666 aaKnown RBP eCLIP20.73■□□□□ 0.91
NPHP4-206ENST00000468253 RPLP0P6Q8NHW5 317 aa20.73■□□□□ 0.91
NPHP4-206ENST00000468253 JOSD2Q8TAC2 188 aa20.73■□□□□ 0.91
NPHP4-206ENST00000468253 FIBINQ8TAL6 211 aa20.73■□□□□ 0.91
NPHP4-206ENST00000468253 CFAP57Q96MR6 1250 aa20.73■□□□□ 0.91
NPHP4-206ENST00000468253 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP20.73■□□□□ 0.91
NPHP4-206ENST00000468253 COX16Q9P0S2 106 aa20.73■□□□□ 0.91
NPHP4-206ENST00000468253 RAPGEFL1Q9UHV5 662 aa20.73■□□□□ 0.91
NPHP4-206ENST00000468253 XPO7Q9UIA9 1087 aaKnown RBP20.73■□□□□ 0.91
NPHP4-206ENST00000468253 MYOFQ9NZM1 2061 aa20.73■□□□□ 0.91
NPHP4-206ENST00000468253 WDFY4Q6ZS81 3184 aa20.72■□□□□ 0.91
NPHP4-206ENST00000468253 TMCO5BA8MYB1 307 aa20.72■□□□□ 0.91
NPHP4-206ENST00000468253 TBL1XO60907 577 aa20.72■□□□□ 0.91
NPHP4-206ENST00000468253 PAGE1O75459 146 aa20.72■□□□□ 0.91
NPHP4-206ENST00000468253 ADCY5O95622 1261 aa20.72■□□□□ 0.91
NPHP4-206ENST00000468253 TDGF1P13385 188 aa20.72■□□□□ 0.91
NPHP4-206ENST00000468253 HNRNPLP14866 589 aaKnown RBP eCLIP20.72■□□□□ 0.91
NPHP4-206ENST00000468253 ZNF143P52747 638 aaPredicted RBP20.72■□□□□ 0.91
NPHP4-206ENST00000468253 SATB1Q01826 763 aa20.72■□□□□ 0.91
NPHP4-206ENST00000468253 KDSRQ06136 332 aa20.72■□□□□ 0.91
NPHP4-206ENST00000468253 EIF4HQ15056 248 aaKnown RBP20.72■□□□□ 0.91
NPHP4-206ENST00000468253 C2orf27AQ580R0 203 aa20.72■□□□□ 0.91
NPHP4-206ENST00000468253 TTC39BQ5VTQ0 682 aaPredicted RBP20.72■□□□□ 0.91
NPHP4-206ENST00000468253 MRFAP1L1Q96HT8 127 aa20.72■□□□□ 0.91
NPHP4-206ENST00000468253 TKTL2Q9H0I9 626 aa20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms