RNA–Protein interactions for RNA: ENST00000468136.5

MSH5-213, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 690 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-213ENST00000468136 GPR62Q9BZJ7 368 aa10.52□□□□□ -0.73
MSH5-213ENST00000468136 TKTL2Q9H0I9 626 aa10.52□□□□□ -0.73
MSH5-213ENST00000468136 SAYSD1Q9NPB0 183 aa10.52□□□□□ -0.73
MSH5-213ENST00000468136 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.52□□□□□ -0.73
MSH5-213ENST00000468136 TMEM30AQ9NV96 361 aa10.52□□□□□ -0.73
MSH5-213ENST00000468136 ETNK2Q9NVF9 386 aa10.52□□□□□ -0.73
MSH5-213ENST00000468136 SAE1Q9UBE0 346 aaPredicted RBP10.52□□□□□ -0.73
MSH5-213ENST00000468136 OR12D3Q9UGF7 316 aa10.52□□□□□ -0.73
MSH5-213ENST00000468136 AFF4Q9UHB7 1163 aaKnown RBP10.52□□□□□ -0.73
MSH5-213ENST00000468136 LGALS13Q9UHV8 139 aa10.52□□□□□ -0.73
MSH5-213ENST00000468136 XPO7Q9UIA9 1087 aaKnown RBP10.52□□□□□ -0.73
MSH5-213ENST00000468136 ZMYND8Q9ULU4 1186 aaPredicted RBP10.52□□□□□ -0.73
MSH5-213ENST00000468136 PTPRDP23468 1912 aa10.52□□□□□ -0.73
MSH5-213ENST00000468136 PATJQ8NI35 1801 aa10.51□□□□□ -0.73
MSH5-213ENST00000468136 MTMR11A4FU01 709 aa10.51□□□□□ -0.73
MSH5-213ENST00000468136 WASH4PA8MWX3 477 aa10.51□□□□□ -0.73
MSH5-213ENST00000468136 TRDMT1O14717 391 aaKnown RBP10.51□□□□□ -0.73
MSH5-213ENST00000468136 CREB3O43889 395 aa10.51□□□□□ -0.73
MSH5-213ENST00000468136 B4GALT3O60512 393 aa10.51□□□□□ -0.73
MSH5-213ENST00000468136 ABCB7O75027 752 aa10.51□□□□□ -0.73
MSH5-213ENST00000468136 APOEP02649 317 aa10.51□□□□□ -0.73
MSH5-213ENST00000468136 SOD2P04179 222 aa10.51□□□□□ -0.73
MSH5-213ENST00000468136 ERCC2P18074 760 aa10.51□□□□□ -0.73
MSH5-213ENST00000468136 ATXN1P54253 815 aaKnown RBP10.51□□□□□ -0.73
MSH5-213ENST00000468136 GDF10P55107 478 aa10.51□□□□□ -0.73
MSH5-213ENST00000468136 HTRA3P83110 453 aa10.51□□□□□ -0.73
MSH5-213ENST00000468136 GBE1Q04446 702 aa10.51□□□□□ -0.73
MSH5-213ENST00000468136 GALNT2Q10471 571 aa10.51□□□□□ -0.73
MSH5-213ENST00000468136 PDIA2Q13087 525 aaKnown RBP10.51□□□□□ -0.73
MSH5-213ENST00000468136 KYNUQ16719 465 aa10.51□□□□□ -0.73
MSH5-213ENST00000468136 PARP6Q2NL67 630 aa10.51□□□□□ -0.73
MSH5-213ENST00000468136 RAB6CQ53S08 254 aa10.51□□□□□ -0.73
MSH5-213ENST00000468136 KIAA1841Q6NSI8 718 aa10.51□□□□□ -0.73
MSH5-213ENST00000468136 TIGD7Q6NT04 549 aaPredicted RBP10.51□□□□□ -0.73
MSH5-213ENST00000468136 KLHDC10Q6PID8 442 aa10.51□□□□□ -0.73
MSH5-213ENST00000468136 NPNTQ6UXI9 565 aa10.51□□□□□ -0.73
MSH5-213ENST00000468136 CYS1Q717R9 158 aa10.51□□□□□ -0.73
MSH5-213ENST00000468136 ATP6V0D2Q8N8Y2 350 aa10.51□□□□□ -0.73
MSH5-213ENST00000468136 GLIS1Q8NBF1 620 aa10.51□□□□□ -0.73
MSH5-213ENST00000468136 NDRG1Q92597 394 aaKnown RBP10.51□□□□□ -0.73
MSH5-213ENST00000468136 FATE1Q969F0 183 aa10.51□□□□□ -0.73
MSH5-213ENST00000468136 TBC1D31Q96DN5 1066 aa10.51□□□□□ -0.73
MSH5-213ENST00000468136 TMEM169Q96HH4 297 aa10.51□□□□□ -0.73
MSH5-213ENST00000468136 SCLYQ96I15 445 aa10.51□□□□□ -0.73
MSH5-213ENST00000468136 IGSF21Q96ID5 467 aa10.51□□□□□ -0.73
MSH5-213ENST00000468136 TSGA13Q96PP4 275 aa10.51□□□□□ -0.73
MSH5-213ENST00000468136 HERC2P3Q9BVR0 1158 aa10.51□□□□□ -0.73
MSH5-213ENST00000468136 TMEM106CQ9BVX2 250 aa10.51□□□□□ -0.73
MSH5-213ENST00000468136 ADAM33Q9BZ11 813 aa10.51□□□□□ -0.73
MSH5-213ENST00000468136 PPP1R12CQ9BZL4 782 aa10.51□□□□□ -0.73
MSH5-213ENST00000468136 UBE2OQ9C0C9 1292 aaKnown RBP10.51□□□□□ -0.73
MSH5-213ENST00000468136 RAB6CQ9H0N0 254 aa10.51□□□□□ -0.73
MSH5-213ENST00000468136 CENPHQ9H3R5 247 aa10.51□□□□□ -0.73
MSH5-213ENST00000468136 RAB6BQ9NRW1 208 aa10.51□□□□□ -0.73
MSH5-213ENST00000468136 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.51□□□□□ -0.73
MSH5-213ENST00000468136 IGSF9Q9P2J2 1179 aa10.51□□□□□ -0.73
MSH5-213ENST00000468136 PPARGC1AQ9UBK2 798 aaKnown RBP10.51□□□□□ -0.73
MSH5-213ENST00000468136 NOVA2Q9UNW9 492 aaKnown RBP10.51□□□□□ -0.73
MSH5-213ENST00000468136 ATP11BQ9Y2G3 1177 aa10.51□□□□□ -0.73
MSH5-213ENST00000468136 HBS1LQ9Y450 684 aaKnown RBP10.51□□□□□ -0.73
MSH5-213ENST00000468136 KCNU1A8MYU2 1149 aa10.5□□□□□ -0.73
MSH5-213ENST00000468136 ACSL3O95573 720 aa10.5□□□□□ -0.73
MSH5-213ENST00000468136 CSH1P0DML2 217 aa10.5□□□□□ -0.73
MSH5-213ENST00000468136 CSH2P0DML3 217 aa10.5□□□□□ -0.73
MSH5-213ENST00000468136 ETS1P14921 441 aa10.5□□□□□ -0.73
MSH5-213ENST00000468136 EPHB2P29323 1055 aa10.5□□□□□ -0.73
MSH5-213ENST00000468136 STX2P32856 288 aa10.5□□□□□ -0.73
MSH5-213ENST00000468136 MMP13P45452 471 aa10.5□□□□□ -0.73
MSH5-213ENST00000468136 LMAN1P49257 510 aa10.5□□□□□ -0.73
MSH5-213ENST00000468136 SLC18A1P54219 525 aa10.5□□□□□ -0.73
MSH5-213ENST00000468136 PPIDQ08752 370 aaKnown RBP10.5□□□□□ -0.73
MSH5-213ENST00000468136 TRIP4Q15650 581 aaPredicted RBP10.5□□□□□ -0.73
MSH5-213ENST00000468136 SNX30Q5VWJ9 437 aa10.5□□□□□ -0.73
MSH5-213ENST00000468136 NUGGCQ68CJ6 796 aa10.5□□□□□ -0.73
MSH5-213ENST00000468136 ZNF449Q6P9G9 518 aa10.5□□□□□ -0.73
MSH5-213ENST00000468136 LRRC31Q6UY01 552 aa10.5□□□□□ -0.73
MSH5-213ENST00000468136 SCD5Q86SK9 330 aa10.5□□□□□ -0.73
MSH5-213ENST00000468136 PALM2Q8IXS6 379 aa10.5□□□□□ -0.73
MSH5-213ENST00000468136 ZBED8Q8IZ13 594 aa10.5□□□□□ -0.73
MSH5-213ENST00000468136 FBXO22Q8NEZ5 403 aa10.5□□□□□ -0.73
MSH5-213ENST00000468136 SCAMP5Q8TAC9 235 aa10.5□□□□□ -0.73
MSH5-213ENST00000468136 EDEM1Q92611 657 aa10.5□□□□□ -0.73
MSH5-213ENST00000468136 FBXO32Q969P5 355 aa10.5□□□□□ -0.73
MSH5-213ENST00000468136 ZNF689Q96CS4 500 aaPredicted RBP10.5□□□□□ -0.73
MSH5-213ENST00000468136 SLC39A13Q96H72 371 aa10.5□□□□□ -0.73
MSH5-213ENST00000468136 BTN2A3PQ96KV6 586 aa10.5□□□□□ -0.73
MSH5-213ENST00000468136 CWH43Q9H720 699 aa10.5□□□□□ -0.73
MSH5-213ENST00000468136 HAUS2Q9NVX0 235 aa10.5□□□□□ -0.73
MSH5-213ENST00000468136 CALCOCO1Q9P1Z2 691 aa10.5□□□□□ -0.73
MSH5-213ENST00000468136 BCCIPQ9P287 314 aaKnown RBP eCLIP10.5□□□□□ -0.73
MSH5-213ENST00000468136 NLRC5Q86WI3 1866 aa10.49□□□□□ -0.73
MSH5-213ENST00000468136 SYNJ2BP-COX16A0A087WUM0 186 aa10.49□□□□□ -0.73
MSH5-213ENST00000468136 EXOC1LA0A1B0GW35 172 aa10.49□□□□□ -0.73
MSH5-213ENST00000468136 A0A1W2PQH9 124 aa10.49□□□□□ -0.73
MSH5-213ENST00000468136 MFSD11O43934 449 aa10.49□□□□□ -0.73
MSH5-213ENST00000468136 LRIG2O94898 1065 aa10.49□□□□□ -0.73
MSH5-213ENST00000468136 ZDHHC11BP0C7U3 371 aa10.49□□□□□ -0.73
MSH5-213ENST00000468136 RAG1P15918 1043 aa10.49□□□□□ -0.73
MSH5-213ENST00000468136 CCNCP24863 283 aa10.49□□□□□ -0.73
MSH5-213ENST00000468136 MDH1P40925 334 aaKnown RBP10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms