RNA–Protein interactions for RNA: ENST00000467533.5

HDAC3-203, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-203ENST00000467533 ITGB2P05107 769 aa10.73□□□□□ -0.69
HDAC3-203ENST00000467533 HMBSP08397 361 aa10.73□□□□□ -0.69
HDAC3-203ENST00000467533 C7P10643 843 aa10.73□□□□□ -0.69
HDAC3-203ENST00000467533 RARGP13631 454 aa10.73□□□□□ -0.69
HDAC3-203ENST00000467533 GARTP22102 1010 aa10.73□□□□□ -0.69
HDAC3-203ENST00000467533 CORO1AP31146 461 aaKnown RBP10.73□□□□□ -0.69
HDAC3-203ENST00000467533 INHBCP55103 352 aa10.73□□□□□ -0.69
HDAC3-203ENST00000467533 KCNA1Q09470 495 aa10.73□□□□□ -0.69
HDAC3-203ENST00000467533 SFSWAPQ12872 951 aaKnown RBP10.73□□□□□ -0.69
HDAC3-203ENST00000467533 MAPK8IP2Q13387 824 aaPredicted RBP10.73□□□□□ -0.69
HDAC3-203ENST00000467533 KCNJ12Q14500 433 aa10.73□□□□□ -0.69
HDAC3-203ENST00000467533 DUOXA2Q1HG44 320 aa10.73□□□□□ -0.69
HDAC3-203ENST00000467533 HIST2H2BCQ6DN03 193 aa10.73□□□□□ -0.69
HDAC3-203ENST00000467533 CHST9Q7L1S5 443 aa10.73□□□□□ -0.69
HDAC3-203ENST00000467533 SPATS2Q86XZ4 545 aaKnown RBP10.73□□□□□ -0.69
HDAC3-203ENST00000467533 SYCP3Q8IZU3 236 aa10.73□□□□□ -0.69
HDAC3-203ENST00000467533 OR2T34Q8NGX1 318 aa10.73□□□□□ -0.69
HDAC3-203ENST00000467533 OR4C6Q8NH72 309 aa10.73□□□□□ -0.69
HDAC3-203ENST00000467533 RASSF8Q8NHQ8 419 aa10.73□□□□□ -0.69
HDAC3-203ENST00000467533 WFIKKN2Q8TEU8 576 aa10.73□□□□□ -0.69
HDAC3-203ENST00000467533 SGF29Q96ES7 293 aa10.73□□□□□ -0.69
HDAC3-203ENST00000467533 CALML4Q96GE6 196 aa10.73□□□□□ -0.69
HDAC3-203ENST00000467533 SLC46A1Q96NT5 459 aa10.73□□□□□ -0.69
HDAC3-203ENST00000467533 ACCSQ96QU6 501 aa10.73□□□□□ -0.69
HDAC3-203ENST00000467533 CBWD1Q9BRT8 395 aa10.73□□□□□ -0.69
HDAC3-203ENST00000467533 SLC2A11Q9BYW1 496 aa10.73□□□□□ -0.69
HDAC3-203ENST00000467533 PCIF1Q9H4Z3 704 aa10.73□□□□□ -0.69
HDAC3-203ENST00000467533 LRRC4CQ9HCJ2 640 aa10.73□□□□□ -0.69
HDAC3-203ENST00000467533 TJP2Q9UDY2 1190 aa10.73□□□□□ -0.69
HDAC3-203ENST00000467533 RASAL2Q9UJF2 1139 aa10.73□□□□□ -0.69
HDAC3-203ENST00000467533 ATXN7L1Q9ULK2 861 aaPredicted RBP10.73□□□□□ -0.69
HDAC3-203ENST00000467533 SCML1Q9UN30 329 aa10.73□□□□□ -0.69
HDAC3-203ENST00000467533 USP9YO00507 2555 aaPredicted RBP10.73□□□□□ -0.69
HDAC3-203ENST00000467533 NBPF19A0A087WUL8 3843 aa10.73□□□□□ -0.69
HDAC3-203ENST00000467533 NOTCH2Q04721 2471 aa10.72□□□□□ -0.69
HDAC3-203ENST00000467533 TLN1Q9Y490 2541 aaKnown RBP10.72□□□□□ -0.69
HDAC3-203ENST00000467533 A0A1W2PQH9 124 aa10.72□□□□□ -0.69
HDAC3-203ENST00000467533 RNASEH1O60930 286 aaKnown RBP10.72□□□□□ -0.69
HDAC3-203ENST00000467533 PPP1R37O75864 691 aa10.72□□□□□ -0.69
HDAC3-203ENST00000467533 GJB6O95452 261 aa10.72□□□□□ -0.69
HDAC3-203ENST00000467533 KLKB1P03952 638 aa10.72□□□□□ -0.69
HDAC3-203ENST00000467533 CKMT1AP12532 417 aa10.72□□□□□ -0.69
HDAC3-203ENST00000467533 CCR5P51681 352 aa10.72□□□□□ -0.69
HDAC3-203ENST00000467533 ISXQ2M1V0 245 aa10.72□□□□□ -0.69
HDAC3-203ENST00000467533 WDR72Q3MJ13 1102 aa10.72□□□□□ -0.69
HDAC3-203ENST00000467533 L1TD1Q5T7N2 865 aaKnown RBP10.72□□□□□ -0.69
HDAC3-203ENST00000467533 NAPEPLDQ6IQ20 393 aa10.72□□□□□ -0.69
HDAC3-203ENST00000467533 KLHDC10Q6PID8 442 aa10.72□□□□□ -0.69
HDAC3-203ENST00000467533 DYMQ7RTS9 669 aa10.72□□□□□ -0.69
HDAC3-203ENST00000467533 ZNF720Q7Z2F6 126 aa10.72□□□□□ -0.69
HDAC3-203ENST00000467533 GPD1LQ8N335 351 aa10.72□□□□□ -0.69
HDAC3-203ENST00000467533 ARL14Q8N4G2 192 aa10.72□□□□□ -0.69
HDAC3-203ENST00000467533 FAM26EQ8N5C1 309 aa10.72□□□□□ -0.69
HDAC3-203ENST00000467533 RDH13Q8NBN7 331 aa10.72□□□□□ -0.69
HDAC3-203ENST00000467533 FBXO18Q8NFZ0 1043 aa10.72□□□□□ -0.69
HDAC3-203ENST00000467533 MAPK15Q8TD08 544 aa10.72□□□□□ -0.69
HDAC3-203ENST00000467533 JAKMIP2Q96AA8 810 aa10.72□□□□□ -0.69
HDAC3-203ENST00000467533 ATXN7L3BQ96GX2 97 aa10.72□□□□□ -0.69
HDAC3-203ENST00000467533 PSMG3-AS1Q96PY0 264 aa10.72□□□□□ -0.69
HDAC3-203ENST00000467533 OMDQ99983 421 aa10.72□□□□□ -0.69
HDAC3-203ENST00000467533 SEMA3CQ99985 751 aa10.72□□□□□ -0.69
HDAC3-203ENST00000467533 DCLK3Q9C098 648 aa10.72□□□□□ -0.69
HDAC3-203ENST00000467533 EPN3Q9H201 632 aa10.72□□□□□ -0.69
HDAC3-203ENST00000467533 MRPL44Q9H9J2 332 aaKnown RBP10.72□□□□□ -0.69
HDAC3-203ENST00000467533 NMUR1Q9HB89 426 aa10.72□□□□□ -0.69
HDAC3-203ENST00000467533 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.72□□□□□ -0.69
HDAC3-203ENST00000467533 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.72□□□□□ -0.69
HDAC3-203ENST00000467533 A0A1W2PNU3 283 aaPredicted RBP10.71□□□□□ -0.69
HDAC3-203ENST00000467533 CLEC18AA5D8T8 446 aa10.71□□□□□ -0.69
HDAC3-203ENST00000467533 CDRT15L2A8MXV6 281 aa10.71□□□□□ -0.69
HDAC3-203ENST00000467533 MID1O15344 667 aa10.71□□□□□ -0.69
HDAC3-203ENST00000467533 MAGEC1O60732 1142 aa10.71□□□□□ -0.69
HDAC3-203ENST00000467533 GCNT3O95395 438 aa10.71□□□□□ -0.69
HDAC3-203ENST00000467533 CENPBP07199 599 aaPredicted RBP10.71□□□□□ -0.69
HDAC3-203ENST00000467533 GP1BAP07359 652 aa10.71□□□□□ -0.69
HDAC3-203ENST00000467533 ALPPL2P10696 532 aa10.71□□□□□ -0.69
HDAC3-203ENST00000467533 CCDC130P13994 396 aa10.71□□□□□ -0.69
HDAC3-203ENST00000467533 DUSP3P51452 185 aaPredicted RBP10.71□□□□□ -0.69
HDAC3-203ENST00000467533 MAP3K7CLP57077 242 aa10.71□□□□□ -0.69
HDAC3-203ENST00000467533 SURF1Q15526 300 aa10.71□□□□□ -0.69
HDAC3-203ENST00000467533 CLEC18BQ6UXF7 455 aa10.71□□□□□ -0.69
HDAC3-203ENST00000467533 PAQR9Q6ZVX9 377 aa10.71□□□□□ -0.69
HDAC3-203ENST00000467533 TRAPPC11Q7Z392 1133 aa10.71□□□□□ -0.69
HDAC3-203ENST00000467533 TADA2BQ86TJ2 420 aa10.71□□□□□ -0.69
HDAC3-203ENST00000467533 WDR49Q8IV35 697 aa10.71□□□□□ -0.69
HDAC3-203ENST00000467533 MFSD2AQ8NA29 543 aa10.71□□□□□ -0.69
HDAC3-203ENST00000467533 CLEC18CQ8NCF0 446 aa10.71□□□□□ -0.69
HDAC3-203ENST00000467533 ZMIZ2Q8NF64 920 aa10.71□□□□□ -0.69
HDAC3-203ENST00000467533 RAD54LQ92698 747 aa10.71□□□□□ -0.69
HDAC3-203ENST00000467533 SMOQ99835 787 aa10.71□□□□□ -0.69
HDAC3-203ENST00000467533 RSPH9Q9H1X1 276 aaPredicted RBP10.71□□□□□ -0.69
HDAC3-203ENST00000467533 NEUROG2Q9H2A3 272 aa10.71□□□□□ -0.69
HDAC3-203ENST00000467533 MTG2Q9H4K7 406 aa10.71□□□□□ -0.69
HDAC3-203ENST00000467533 BLOC1S4Q9NUP1 217 aa10.71□□□□□ -0.69
HDAC3-203ENST00000467533 EVA1BQ9NVM1 165 aa10.71□□□□□ -0.69
HDAC3-203ENST00000467533 TBC1D7Q9P0N9 293 aa10.71□□□□□ -0.69
HDAC3-203ENST00000467533 SUN2Q9UH99 717 aa10.71□□□□□ -0.69
HDAC3-203ENST00000467533 NAGPAQ9UK23 515 aa10.71□□□□□ -0.69
HDAC3-203ENST00000467533 AGO1Q9UL18 857 aaKnown RBP10.71□□□□□ -0.69
HDAC3-203ENST00000467533 SCML2Q9UQR0 700 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms