RNA–Protein interactions for RNA: ENST00000465282.5

USP39-211, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-211ENST00000465282 TYW5A2RUC4 315 aaKnown RBP17.56■□□□□ 0.4
USP39-211ENST00000465282 SHISA7A6NL88 538 aa17.56■□□□□ 0.4
USP39-211ENST00000465282 ATMINO43313 823 aaPredicted RBP17.56■□□□□ 0.4
USP39-211ENST00000465282 GJB6O95452 261 aa17.56■□□□□ 0.4
USP39-211ENST00000465282 MOCS2O96007 188 aaPredicted RBP17.56■□□□□ 0.4
USP39-211ENST00000465282 TMEM253P0C7T8 217 aa17.56■□□□□ 0.4
USP39-211ENST00000465282 TFE3P19532 575 aaPredicted RBP17.56■□□□□ 0.4
USP39-211ENST00000465282 AIF1P55008 147 aa17.56■□□□□ 0.4
USP39-211ENST00000465282 GRSF1Q12849 480 aaKnown RBP eCLIP17.56■□□□□ 0.4
USP39-211ENST00000465282 SPA17Q15506 151 aa17.56■□□□□ 0.4
USP39-211ENST00000465282 C15orf59Q2T9L4 293 aaPredicted RBP17.56■□□□□ 0.4
USP39-211ENST00000465282 TMEM196Q5HYL7 178 aa17.56■□□□□ 0.4
USP39-211ENST00000465282 DGKKQ5KSL6 1271 aa17.56■□□□□ 0.4
USP39-211ENST00000465282 PIK3R6Q5UE93 754 aa17.56■□□□□ 0.4
USP39-211ENST00000465282 FYB2Q5VWT5 728 aa17.56■□□□□ 0.4
USP39-211ENST00000465282 ASTLQ6HA08 431 aaPredicted RBP17.56■□□□□ 0.4
USP39-211ENST00000465282 ETFBKMTQ8IXQ9 262 aa17.56■□□□□ 0.4
USP39-211ENST00000465282 SYNPOQ8N3V7 929 aa17.56■□□□□ 0.4
USP39-211ENST00000465282 PJA1Q8NG27 643 aa17.56■□□□□ 0.4
USP39-211ENST00000465282 DDI1Q8WTU0 396 aa17.56■□□□□ 0.4
USP39-211ENST00000465282 FAM172AQ8WUF8 416 aa17.56■□□□□ 0.4
USP39-211ENST00000465282 CHFRQ96EP1 664 aa17.56■□□□□ 0.4
USP39-211ENST00000465282 PNKPQ96T60 521 aa17.56■□□□□ 0.4
USP39-211ENST00000465282 BAG1Q99933 345 aaPredicted RBP17.56■□□□□ 0.4
USP39-211ENST00000465282 TKTL2Q9H0I9 626 aa17.56■□□□□ 0.4
USP39-211ENST00000465282 SPTLC3Q9NUV7 552 aa17.56■□□□□ 0.4
USP39-211ENST00000465282 DEC1Q9P2X7 70 aa17.56■□□□□ 0.4
USP39-211ENST00000465282 SIT1Q9Y3P8 196 aa17.56■□□□□ 0.4
USP39-211ENST00000465282 A0A0A0MRY4 1105 aa17.55■□□□□ 0.4
USP39-211ENST00000465282 FAM170BA6NMN3 283 aa17.55■□□□□ 0.4
USP39-211ENST00000465282 EIF3CLB5ME19 914 aaKnown RBP17.55■□□□□ 0.4
USP39-211ENST00000465282 NEDD8-MDP1E9PL57 170 aa17.55■□□□□ 0.4
USP39-211ENST00000465282 RNF8O76064 485 aa17.55■□□□□ 0.4
USP39-211ENST00000465282 IPO7O95373 1038 aaKnown RBP17.55■□□□□ 0.4
USP39-211ENST00000465282 AOC1P19801 751 aa17.55■□□□□ 0.4
USP39-211ENST00000465282 OPRD1P41143 372 aa17.55■□□□□ 0.4
USP39-211ENST00000465282 GALK1P51570 392 aa17.55■□□□□ 0.4
USP39-211ENST00000465282 HDAC4P56524 1084 aa17.55■□□□□ 0.4
USP39-211ENST00000465282 LRRC32Q14392 662 aa17.55■□□□□ 0.4
USP39-211ENST00000465282 PIGHQ14442 188 aaPredicted RBP17.55■□□□□ 0.4
USP39-211ENST00000465282 UBXN2BQ14CS0 331 aa17.55■□□□□ 0.4
USP39-211ENST00000465282 CDO1Q16878 200 aa17.55■□□□□ 0.4
USP39-211ENST00000465282 FBXO43Q4G163 708 aa17.55■□□□□ 0.4
USP39-211ENST00000465282 MS4A13Q5J8X5 152 aa17.55■□□□□ 0.4
USP39-211ENST00000465282 TTC39BQ5VTQ0 682 aaPredicted RBP17.55■□□□□ 0.4
USP39-211ENST00000465282 NADSYN1Q6IA69 706 aa17.55■□□□□ 0.4
USP39-211ENST00000465282 TXNDC11Q6PKC3 985 aa17.55■□□□□ 0.4
USP39-211ENST00000465282 DNAAF5Q86Y56 855 aa17.55■□□□□ 0.4
USP39-211ENST00000465282 ZNF687Q8N1G0 1237 aa17.55■□□□□ 0.4
USP39-211ENST00000465282 HJURPQ8NCD3 748 aaPredicted RBP17.55■□□□□ 0.4
USP39-211ENST00000465282 FLCNQ8NFG4 579 aa17.55■□□□□ 0.4
USP39-211ENST00000465282 ANP32BQ92688 251 aaKnown RBP17.55■□□□□ 0.4
USP39-211ENST00000465282 NTAN1Q96AB6 310 aa17.55■□□□□ 0.4
USP39-211ENST00000465282 EIF3CQ99613 913 aaKnown RBP17.55■□□□□ 0.4
USP39-211ENST00000465282 PRMT1Q99873 361 aaKnown RBP17.55■□□□□ 0.4
USP39-211ENST00000465282 IER2Q9BTL4 223 aa17.55■□□□□ 0.4
USP39-211ENST00000465282 C11orf16Q9NQ32 467 aa17.55■□□□□ 0.4
USP39-211ENST00000465282 FBXO10Q9UK96 956 aa17.55■□□□□ 0.4
USP39-211ENST00000465282 EPN1Q9Y6I3 576 aaPredicted RBP17.55■□□□□ 0.4
USP39-211ENST00000465282 DOCK4Q8N1I0 1966 aa17.54■□□□□ 0.4
USP39-211ENST00000465282 F5H5T6 163 aa17.54■□□□□ 0.4
USP39-211ENST00000465282 MYO1FO00160 1098 aa17.54■□□□□ 0.4
USP39-211ENST00000465282 CCP110O43303 1012 aa17.54■□□□□ 0.4
USP39-211ENST00000465282 TULP3O75386 442 aa17.54■□□□□ 0.4
USP39-211ENST00000465282 PAGE1O75459 146 aa17.54■□□□□ 0.4
USP39-211ENST00000465282 TACR2P21452 398 aa17.54■□□□□ 0.4
USP39-211ENST00000465282 CD72P21854 359 aa17.54■□□□□ 0.4
USP39-211ENST00000465282 PSMA2P25787 234 aa17.54■□□□□ 0.4
USP39-211ENST00000465282 TARSP26639 723 aaKnown RBP17.54■□□□□ 0.4
USP39-211ENST00000465282 SLC6A4P31645 630 aa17.54■□□□□ 0.4
USP39-211ENST00000465282 RPS9P46781 194 aaKnown RBP17.54■□□□□ 0.4
USP39-211ENST00000465282 PON2Q15165 354 aa17.54■□□□□ 0.4
USP39-211ENST00000465282 RABGAP1LQ5R372 815 aa17.54■□□□□ 0.4
USP39-211ENST00000465282 RNF43Q68DV7 783 aa17.54■□□□□ 0.4
USP39-211ENST00000465282 CWF19L1Q69YN2 538 aaKnown RBP17.54■□□□□ 0.4
USP39-211ENST00000465282 CHSY1Q86X52 802 aa17.54■□□□□ 0.4
USP39-211ENST00000465282 FAM131BQ86XD5 332 aa17.54■□□□□ 0.4
USP39-211ENST00000465282 RHOT2Q8IXI1 618 aa17.54■□□□□ 0.4
USP39-211ENST00000465282 NIPA2Q8N8Q9 360 aa17.54■□□□□ 0.4
USP39-211ENST00000465282 CLDN23Q96B33 292 aa17.54■□□□□ 0.4
USP39-211ENST00000465282 NUP85Q9BW27 656 aa17.54■□□□□ 0.4
USP39-211ENST00000465282 IP6K2Q9UHH9 426 aa17.54■□□□□ 0.4
USP39-211ENST00000465282 NDUFA10O95299 355 aa17.53■□□□□ 0.4
USP39-211ENST00000465282 PDGFBP01127 241 aaPredicted RBP17.53■□□□□ 0.4
USP39-211ENST00000465282 APODP05090 189 aa17.53■□□□□ 0.4
USP39-211ENST00000465282 ADRA1BP35368 520 aa17.53■□□□□ 0.4
USP39-211ENST00000465282 GRIA2P42262 883 aa17.53■□□□□ 0.4
USP39-211ENST00000465282 NUBP1P53384 320 aa17.53■□□□□ 0.4
USP39-211ENST00000465282 VCPP55072 806 aaKnown RBP17.53■□□□□ 0.4
USP39-211ENST00000465282 OGDHQ02218 1023 aa17.53■□□□□ 0.4
USP39-211ENST00000465282 NRG1Q02297 640 aaPredicted RBP17.53■□□□□ 0.4
USP39-211ENST00000465282 SCAPQ12770 1279 aa17.53■□□□□ 0.4
USP39-211ENST00000465282 CCINQ13939 588 aa17.53■□□□□ 0.4
USP39-211ENST00000465282 TCEAL1Q15170 157 aa17.53■□□□□ 0.4
USP39-211ENST00000465282 E2F5Q15329 346 aa17.53■□□□□ 0.4
USP39-211ENST00000465282 C5orf22Q49AR2 442 aa17.53■□□□□ 0.4
USP39-211ENST00000465282 SH3PXD2AQ5TCZ1 1133 aa17.53■□□□□ 0.4
USP39-211ENST00000465282 RAP1GAP2Q684P5 730 aa17.53■□□□□ 0.4
USP39-211ENST00000465282 RFWD3Q6PCD5 774 aa17.53■□□□□ 0.4
USP39-211ENST00000465282 LRRC31Q6UY01 552 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms