RNA–Protein interactions for RNA: ENST00000465269.5

HDAC6-214, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,139 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-214ENST00000465269 ACP1P24666 158 aa15.67■□□□□ 0.1
HDAC6-214ENST00000465269 HLA-FP30511 346 aa15.67■□□□□ 0.1
HDAC6-214ENST00000465269 ARRB1P49407 418 aaPredicted RBP15.67■□□□□ 0.1
HDAC6-214ENST00000465269 NXPH1P58417 271 aa15.67■□□□□ 0.1
HDAC6-214ENST00000465269 EHHADHQ08426 723 aa15.67■□□□□ 0.1
HDAC6-214ENST00000465269 EFEMP1Q12805 493 aa15.67■□□□□ 0.1
HDAC6-214ENST00000465269 TTC31Q49AM3 519 aaPredicted RBP15.67■□□□□ 0.1
HDAC6-214ENST00000465269 SNRNP27Q8WVK2 155 aaKnown RBP15.67■□□□□ 0.1
HDAC6-214ENST00000465269 OSBPL2Q9H1P3 480 aa15.67■□□□□ 0.1
HDAC6-214ENST00000465269 FBXO44Q9H4M3 255 aa15.67■□□□□ 0.1
HDAC6-214ENST00000465269 FBXL12Q9NXK8 326 aa15.67■□□□□ 0.1
HDAC6-214ENST00000465269 HSPBP1Q9NZL4 362 aa15.67■□□□□ 0.1
HDAC6-214ENST00000465269 PCDHB13Q9Y5F0 798 aa15.67■□□□□ 0.1
HDAC6-214ENST00000465269 CENPEQ02224 2701 aa15.66■□□□□ 0.1
HDAC6-214ENST00000465269 A0A1W2PP55 124 aa15.66■□□□□ 0.1
HDAC6-214ENST00000465269 K7ENP7 123 aa15.66■□□□□ 0.1
HDAC6-214ENST00000465269 TLR4O00206 839 aa15.66■□□□□ 0.1
HDAC6-214ENST00000465269 SLC26A4O43511 780 aa15.66■□□□□ 0.1
HDAC6-214ENST00000465269 INO80CQ6PI98 192 aaPredicted RBP15.66■□□□□ 0.1
HDAC6-214ENST00000465269 CHST9Q7L1S5 443 aa15.66■□□□□ 0.1
HDAC6-214ENST00000465269 TMC6Q7Z403 805 aa15.66■□□□□ 0.1
HDAC6-214ENST00000465269 ADIPOR2Q86V24 386 aa15.66■□□□□ 0.1
HDAC6-214ENST00000465269 CACTIN-AS1Q8N1I8 211 aa15.66■□□□□ 0.1
HDAC6-214ENST00000465269 SERAC1Q96JX3 654 aa15.66■□□□□ 0.1
HDAC6-214ENST00000465269 NEUROG2Q9H2A3 272 aa15.66■□□□□ 0.1
HDAC6-214ENST00000465269 PABPC3Q9H361 631 aaKnown RBP15.66■□□□□ 0.1
HDAC6-214ENST00000465269 CSNK1G1Q9HCP0 422 aa15.66■□□□□ 0.1
HDAC6-214ENST00000465269 ABCB8Q9NUT2 735 aa15.66■□□□□ 0.1
HDAC6-214ENST00000465269 WDR70Q9NW82 654 aa15.66■□□□□ 0.1
HDAC6-214ENST00000465269 SEL1LQ9UBV2 794 aa15.66■□□□□ 0.1
HDAC6-214ENST00000465269 CREBBPQ92793 2442 aa15.66■□□□□ 0.1
HDAC6-214ENST00000465269 MID1O15344 667 aa15.65■□□□□ 0.1
HDAC6-214ENST00000465269 CSO75390 466 aaKnown RBP15.65■□□□□ 0.1
HDAC6-214ENST00000465269 NTRK1P04629 796 aa15.65■□□□□ 0.1
HDAC6-214ENST00000465269 GAP43P17677 238 aa15.65■□□□□ 0.1
HDAC6-214ENST00000465269 HOXD9P28356 352 aaPredicted RBP15.65■□□□□ 0.1
HDAC6-214ENST00000465269 HOXD13P35453 343 aa15.65■□□□□ 0.1
HDAC6-214ENST00000465269 CASP4P49662 377 aa15.65■□□□□ 0.1
HDAC6-214ENST00000465269 TRPC3Q13507 836 aa15.65■□□□□ 0.1
HDAC6-214ENST00000465269 CDCP2Q5VXM1 449 aa15.65■□□□□ 0.1
HDAC6-214ENST00000465269 ZNF776Q68DI1 518 aaPredicted RBP15.65■□□□□ 0.1
HDAC6-214ENST00000465269 WFDC5Q8TCV5 224 aa15.65■□□□□ 0.1
HDAC6-214ENST00000465269 CGRRF1Q99675 332 aa15.65■□□□□ 0.1
HDAC6-214ENST00000465269 POLR1BQ9H9Y6 1135 aa15.65■□□□□ 0.1
HDAC6-214ENST00000465269 PLA2G4CQ9UP65 541 aa15.65■□□□□ 0.1
HDAC6-214ENST00000465269 A0A1B0GVM2 712 aa15.64■□□□□ 0.09
HDAC6-214ENST00000465269 OPA1O60313 960 aa15.64■□□□□ 0.09
HDAC6-214ENST00000465269 RNASEH2AO75792 299 aaKnown RBP15.64■□□□□ 0.09
HDAC6-214ENST00000465269 DXOO77932 396 aaKnown RBP15.64■□□□□ 0.09
HDAC6-214ENST00000465269 CYBBP04839 570 aa15.64■□□□□ 0.09
HDAC6-214ENST00000465269 FAM163BP0C2L3 166 aa15.64■□□□□ 0.09
HDAC6-214ENST00000465269 C7P10643 843 aa15.64■□□□□ 0.09
HDAC6-214ENST00000465269 CHKAP35790 457 aa15.64■□□□□ 0.09
HDAC6-214ENST00000465269 RXRGP48443 463 aa15.64■□□□□ 0.09
HDAC6-214ENST00000465269 LSSP48449 732 aa15.64■□□□□ 0.09
HDAC6-214ENST00000465269 SGSHP51688 502 aa15.64■□□□□ 0.09
HDAC6-214ENST00000465269 PPP2CBP62714 309 aa15.64■□□□□ 0.09
HDAC6-214ENST00000465269 PPP2CAP67775 309 aa15.64■□□□□ 0.09
HDAC6-214ENST00000465269 DAB2P98082 770 aa15.64■□□□□ 0.09
HDAC6-214ENST00000465269 ZBTB16Q05516 673 aa15.64■□□□□ 0.09
HDAC6-214ENST00000465269 SURF1Q15526 300 aa15.64■□□□□ 0.09
HDAC6-214ENST00000465269 SNRNP35Q16560 246 aaKnown RBP15.64■□□□□ 0.09
HDAC6-214ENST00000465269 LINC00303Q3SY05 128 aa15.64■□□□□ 0.09
HDAC6-214ENST00000465269 C3orf38Q5JPI3 329 aa15.64■□□□□ 0.09
HDAC6-214ENST00000465269 KLHDC10Q6PID8 442 aa15.64■□□□□ 0.09
HDAC6-214ENST00000465269 CLEC20AQ6ZU45 233 aa15.64■□□□□ 0.09
HDAC6-214ENST00000465269 SLC25A45Q8N413 288 aa15.64■□□□□ 0.09
HDAC6-214ENST00000465269 SKA1Q96BD8 255 aa15.64■□□□□ 0.09
HDAC6-214ENST00000465269 TNIP3Q96KP6 325 aa15.64■□□□□ 0.09
HDAC6-214ENST00000465269 DPH1Q9BZG8 443 aa15.64■□□□□ 0.09
HDAC6-214ENST00000465269 OLFML3Q9NRN5 406 aa15.64■□□□□ 0.09
HDAC6-214ENST00000465269 UCKL1Q9NWZ5 548 aa15.64■□□□□ 0.09
HDAC6-214ENST00000465269 NCKAP1Q9Y2A7 1128 aa15.64■□□□□ 0.09
HDAC6-214ENST00000465269 CA5BQ9Y2D0 317 aa15.64■□□□□ 0.09
HDAC6-214ENST00000465269 SSUH2Q9Y2M2 353 aa15.64■□□□□ 0.09
HDAC6-214ENST00000465269 DOCK9Q9BZ29 2069 aa15.64■□□□□ 0.09
HDAC6-214ENST00000465269 KIF26BQ2KJY2 2108 aa15.64■□□□□ 0.09
HDAC6-214ENST00000465269 ITPR2Q14571 2701 aa15.63■□□□□ 0.09
HDAC6-214ENST00000465269 YKT6O15498 198 aa15.63■□□□□ 0.09
HDAC6-214ENST00000465269 FFAR2O15552 330 aa15.63■□□□□ 0.09
HDAC6-214ENST00000465269 TIMM44O43615 452 aa15.63■□□□□ 0.09
HDAC6-214ENST00000465269 SIN3BO75182 1162 aa15.63■□□□□ 0.09
HDAC6-214ENST00000465269 LONP1P36776 959 aaKnown RBP15.63■□□□□ 0.09
HDAC6-214ENST00000465269 CYP2J2P51589 502 aa15.63■□□□□ 0.09
HDAC6-214ENST00000465269 NDST1P52848 882 aa15.63■□□□□ 0.09
HDAC6-214ENST00000465269 ERVPABLB-1P60509 514 aa15.63■□□□□ 0.09
HDAC6-214ENST00000465269 CYP24A1Q07973 514 aa15.63■□□□□ 0.09
HDAC6-214ENST00000465269 ZSCAN23Q3MJ62 389 aa15.63■□□□□ 0.09
HDAC6-214ENST00000465269 MBLAC2Q68D91 279 aa15.63■□□□□ 0.09
HDAC6-214ENST00000465269 RSPH9Q9H1X1 276 aaPredicted RBP15.63■□□□□ 0.09
HDAC6-214ENST00000465269 SATB2Q9UPW6 733 aa15.63■□□□□ 0.09
HDAC6-214ENST00000465269 ZNF510Q9Y2H8 683 aa15.63■□□□□ 0.09
HDAC6-214ENST00000465269 SPTBN1Q01082 2364 aaKnown RBP15.63■□□□□ 0.09
HDAC6-214ENST00000465269 SLC12A8A0AV02 714 aa15.62■□□□□ 0.09
HDAC6-214ENST00000465269 CASC3O15234 703 aaKnown RBP15.62■□□□□ 0.09
HDAC6-214ENST00000465269 CLIC2O15247 247 aa15.62■□□□□ 0.09
HDAC6-214ENST00000465269 EFSO43281 561 aa15.62■□□□□ 0.09
HDAC6-214ENST00000465269 EIF5BO60841 1220 aaKnown RBP15.62■□□□□ 0.09
HDAC6-214ENST00000465269 KIF20AO95235 890 aa15.62■□□□□ 0.09
HDAC6-214ENST00000465269 FAM200BP0CF97 657 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms