RNA–Protein interactions for RNA: ENST00000465039.5

LIMD1-203, Transcript of LIM domains containing 1, humanhuman

TSL 5

Gene LIMD1, Length 676 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-203ENST00000465039 SCAPQ12770 1279 aa14.21□□□□□ -0.13
LIMD1-203ENST00000465039 FZD5Q13467 585 aa14.21□□□□□ -0.13
LIMD1-203ENST00000465039 ACAP1Q15027 740 aa14.21□□□□□ -0.13
LIMD1-203ENST00000465039 PON2Q15165 354 aa14.21□□□□□ -0.13
LIMD1-203ENST00000465039 ANO4Q32M45 955 aa14.21□□□□□ -0.13
LIMD1-203ENST00000465039 ARL13BQ3SXY8 428 aa14.21□□□□□ -0.13
LIMD1-203ENST00000465039 C2CD6Q53TS8 623 aa14.21□□□□□ -0.13
LIMD1-203ENST00000465039 ZC3H12AQ5D1E8 599 aaKnown RBP14.21□□□□□ -0.13
LIMD1-203ENST00000465039 C10orf76Q5T2E6 689 aa14.21□□□□□ -0.13
LIMD1-203ENST00000465039 PIK3R6Q5UE93 754 aa14.21□□□□□ -0.13
LIMD1-203ENST00000465039 FSTL4Q6MZW2 842 aa14.21□□□□□ -0.13
LIMD1-203ENST00000465039 TRNP1Q6NT89 227 aa14.21□□□□□ -0.13
LIMD1-203ENST00000465039 DCUN1D2Q6PH85 259 aa14.21□□□□□ -0.13
LIMD1-203ENST00000465039 PHTF2Q8N3S3 785 aa14.21□□□□□ -0.13
LIMD1-203ENST00000465039 TMEM105Q8N8V8 129 aa14.21□□□□□ -0.13
LIMD1-203ENST00000465039 TC2NQ8N9U0 490 aa14.21□□□□□ -0.13
LIMD1-203ENST00000465039 ADAM32Q8TC27 787 aa14.21□□□□□ -0.13
LIMD1-203ENST00000465039 RXFP2Q8WXD0 754 aa14.21□□□□□ -0.13
LIMD1-203ENST00000465039 NTAN1Q96AB6 310 aa14.21□□□□□ -0.13
LIMD1-203ENST00000465039 CCDC42Q96M95 316 aa14.21□□□□□ -0.13
LIMD1-203ENST00000465039 HAPLN3Q96S86 360 aa14.21□□□□□ -0.13
LIMD1-203ENST00000465039 TBCBQ99426 244 aa14.21□□□□□ -0.13
LIMD1-203ENST00000465039 EIF3CQ99613 913 aaKnown RBP14.21□□□□□ -0.13
LIMD1-203ENST00000465039 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.21□□□□□ -0.13
LIMD1-203ENST00000465039 IRF2BPLQ9H1B7 796 aa14.21□□□□□ -0.13
LIMD1-203ENST00000465039 DEF6Q9H4E7 631 aa14.21□□□□□ -0.13
LIMD1-203ENST00000465039 WDCPQ9H6R7 721 aa14.21□□□□□ -0.13
LIMD1-203ENST00000465039 TMEM191CA6NGB0 347 aa14.2□□□□□ -0.14
LIMD1-203ENST00000465039 GOLGA6L6A8MZA4 724 aa14.2□□□□□ -0.14
LIMD1-203ENST00000465039 F5H5T6 163 aa14.2□□□□□ -0.14
LIMD1-203ENST00000465039 SCAMP3O14828 347 aaKnown RBP14.2□□□□□ -0.14
LIMD1-203ENST00000465039 AKR1B10O60218 316 aa14.2□□□□□ -0.14
LIMD1-203ENST00000465039 KAT7O95251 611 aa14.2□□□□□ -0.14
LIMD1-203ENST00000465039 APODP05090 189 aa14.2□□□□□ -0.14
LIMD1-203ENST00000465039 PLEKP08567 350 aaPredicted RBP14.2□□□□□ -0.14
LIMD1-203ENST00000465039 HOXD9P28356 352 aaPredicted RBP14.2□□□□□ -0.14
LIMD1-203ENST00000465039 EIF4A3P38919 411 aaKnown RBP14.2□□□□□ -0.14
LIMD1-203ENST00000465039 GALK1P51570 392 aa14.2□□□□□ -0.14
LIMD1-203ENST00000465039 OXCT1P55809 520 aa14.2□□□□□ -0.14
LIMD1-203ENST00000465039 NRG1Q02297 640 aaPredicted RBP14.2□□□□□ -0.14
LIMD1-203ENST00000465039 NME3Q13232 169 aa14.2□□□□□ -0.14
LIMD1-203ENST00000465039 CCDC14Q49A88 953 aa14.2□□□□□ -0.14
LIMD1-203ENST00000465039 C5orf22Q49AR2 442 aa14.2□□□□□ -0.14
LIMD1-203ENST00000465039 MS4A13Q5J8X5 152 aa14.2□□□□□ -0.14
LIMD1-203ENST00000465039 RABGAP1LQ5R372 815 aa14.2□□□□□ -0.14
LIMD1-203ENST00000465039 GRAMD4Q6IC98 578 aa14.2□□□□□ -0.14
LIMD1-203ENST00000465039 CCDC170Q8IYT3 715 aa14.2□□□□□ -0.14
LIMD1-203ENST00000465039 SPEM1Q8N4L4 309 aa14.2□□□□□ -0.14
LIMD1-203ENST00000465039 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.2□□□□□ -0.14
LIMD1-203ENST00000465039 TERB1Q8NA31 727 aa14.2□□□□□ -0.14
LIMD1-203ENST00000465039 RNF34Q969K3 372 aa14.2□□□□□ -0.14
LIMD1-203ENST00000465039 ACDQ96AP0 544 aa14.2□□□□□ -0.14
LIMD1-203ENST00000465039 ZNF653Q96CK0 615 aa14.2□□□□□ -0.14
LIMD1-203ENST00000465039 TMA16Q96EY4 203 aaKnown RBP14.2□□□□□ -0.14
LIMD1-203ENST00000465039 CFAP57Q96MR6 1250 aa14.2□□□□□ -0.14
LIMD1-203ENST00000465039 MCEEQ96PE7 176 aa14.2□□□□□ -0.14
LIMD1-203ENST00000465039 PRMT1Q99873 361 aaKnown RBP14.2□□□□□ -0.14
LIMD1-203ENST00000465039 ARHGEF4Q9NR80 690 aa14.2□□□□□ -0.14
LIMD1-203ENST00000465039 CNOT8Q9UFF9 292 aaKnown RBP14.2□□□□□ -0.14
LIMD1-203ENST00000465039 INTUQ9ULD6 942 aa14.2□□□□□ -0.14
LIMD1-203ENST00000465039 NDRG2Q9UN36 371 aaKnown RBP14.2□□□□□ -0.14
LIMD1-203ENST00000465039 STARD13Q9Y3M8 1113 aa14.2□□□□□ -0.14
LIMD1-203ENST00000465039 MYOFQ9NZM1 2061 aa14.19□□□□□ -0.14
LIMD1-203ENST00000465039 A0A1B0GVM2 712 aa14.19□□□□□ -0.14
LIMD1-203ENST00000465039 TCAF2A6NFQ2 919 aa14.19□□□□□ -0.14
LIMD1-203ENST00000465039 CYP1A2P05177 515 aa14.19□□□□□ -0.14
LIMD1-203ENST00000465039 CD72P21854 359 aa14.19□□□□□ -0.14
LIMD1-203ENST00000465039 DGKGP49619 791 aa14.19□□□□□ -0.14
LIMD1-203ENST00000465039 CCR3P51677 355 aa14.19□□□□□ -0.14
LIMD1-203ENST00000465039 ADKP55263 362 aaKnown RBP14.19□□□□□ -0.14
LIMD1-203ENST00000465039 MRPS21P82921 87 aaKnown RBP14.19□□□□□ -0.14
LIMD1-203ENST00000465039 NADSYN1Q6IA69 706 aa14.19□□□□□ -0.14
LIMD1-203ENST00000465039 TPGS1Q6ZTW0 290 aa14.19□□□□□ -0.14
LIMD1-203ENST00000465039 TRMT11Q7Z4G4 463 aaKnown RBP14.19□□□□□ -0.14
LIMD1-203ENST00000465039 PSTKQ8IV42 348 aaKnown RBP14.19□□□□□ -0.14
LIMD1-203ENST00000465039 CCDC117Q8IWD4 279 aaPredicted RBP14.19□□□□□ -0.14
LIMD1-203ENST00000465039 EMC1Q8N766 993 aa14.19□□□□□ -0.14
LIMD1-203ENST00000465039 DTWD2Q8NBA8 298 aa14.19□□□□□ -0.14
LIMD1-203ENST00000465039 JOSD2Q8TAC2 188 aa14.19□□□□□ -0.14
LIMD1-203ENST00000465039 TTC8Q8TAM2 541 aa14.19□□□□□ -0.14
LIMD1-203ENST00000465039 WFIKKN2Q8TEU8 576 aa14.19□□□□□ -0.14
LIMD1-203ENST00000465039 DDI1Q8WTU0 396 aa14.19□□□□□ -0.14
LIMD1-203ENST00000465039 CTNNBL1Q8WYA6 563 aaPredicted RBP14.19□□□□□ -0.14
LIMD1-203ENST00000465039 NHEJ1Q9H9Q4 299 aaPredicted RBP14.19□□□□□ -0.14
LIMD1-203ENST00000465039 LMAN1LQ9HAT1 526 aa14.19□□□□□ -0.14
LIMD1-203ENST00000465039 LUC7LQ9NQ29 371 aaKnown RBP14.19□□□□□ -0.14
LIMD1-203ENST00000465039 DNAJC17Q9NVM6 304 aaKnown RBP14.19□□□□□ -0.14
LIMD1-203ENST00000465039 UVRAGQ9P2Y5 699 aa14.19□□□□□ -0.14
LIMD1-203ENST00000465039 HCN4Q9Y3Q4 1203 aa14.19□□□□□ -0.14
LIMD1-203ENST00000465039 TMCO5BA8MYB1 307 aa14.18□□□□□ -0.14
LIMD1-203ENST00000465039 GALR2O43603 387 aaPredicted RBP14.18□□□□□ -0.14
LIMD1-203ENST00000465039 TIMM44O43615 452 aa14.18□□□□□ -0.14
LIMD1-203ENST00000465039 PAGE1O75459 146 aa14.18□□□□□ -0.14
LIMD1-203ENST00000465039 LCA5LO95447 670 aa14.18□□□□□ -0.14
LIMD1-203ENST00000465039 MOCS2O96007 188 aaPredicted RBP14.18□□□□□ -0.14
LIMD1-203ENST00000465039 TACR2P21452 398 aa14.18□□□□□ -0.14
LIMD1-203ENST00000465039 HOXA6P31267 233 aa14.18□□□□□ -0.14
LIMD1-203ENST00000465039 SLC6A4P31645 630 aa14.18□□□□□ -0.14
LIMD1-203ENST00000465039 HTR7P34969 479 aa14.18□□□□□ -0.14
LIMD1-203ENST00000465039 ZNF135P52742 658 aaPredicted RBP14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms