RNA–Protein interactions for RNA: ENST00000464313.1

PTPN12-210, Transcript of protein tyrosine phosphatase, non-receptor type 12, human

TSL 4

Gene PTPN12, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN12-210	ENST00000464313	MYRIP	Q8NFW9	859 aa		4.64	□□□□□ -1.67
PTPN12-210	ENST00000464313	OR52L2P	Q8NGH6	319 aa		4.64	□□□□□ -1.67
PTPN12-210	ENST00000464313	GLMP	Q8WWB7	406 aa		4.64	□□□□□ -1.67
PTPN12-210	ENST00000464313	RSC1A1	Q92681	617 aa		4.64	□□□□□ -1.67
PTPN12-210	ENST00000464313	TRMT61A	Q96FX7	289 aa	Known RBP	4.64	□□□□□ -1.67
PTPN12-210	ENST00000464313	CCDC17	Q96LX7	622 aa		4.64	□□□□□ -1.67
PTPN12-210	ENST00000464313	SCLT1	Q96NL6	688 aa		4.64	□□□□□ -1.67
PTPN12-210	ENST00000464313	FAM167B	Q9BTA0	163 aa		4.64	□□□□□ -1.67
PTPN12-210	ENST00000464313	DDX23	Q9BUQ8	820 aa	Known RBP	4.64	□□□□□ -1.67
PTPN12-210	ENST00000464313	ADGRE3	Q9BY15	652 aa		4.64	□□□□□ -1.67
PTPN12-210	ENST00000464313	RXFP3	Q9NSD7	469 aa		4.64	□□□□□ -1.67
PTPN12-210	ENST00000464313	C19orf53	Q9UNZ5	99 aa	Predicted RBP	4.64	□□□□□ -1.67
PTPN12-210	ENST00000464313	AOX1	Q06278	1338 aa		4.64	□□□□□ -1.67
PTPN12-210	ENST00000464313	MANSC4	A6NHS7	340 aa	Predicted RBP	4.63	□□□□□ -1.67
PTPN12-210	ENST00000464313	AGAP5	A6NIR3	686 aa		4.63	□□□□□ -1.67
PTPN12-210	ENST00000464313	C16orf96	A6NNT2	1141 aa		4.63	□□□□□ -1.67
PTPN12-210	ENST00000464313	TISP43	B9A030	160 aa		4.63	□□□□□ -1.67
PTPN12-210	ENST00000464313		B9A039	149 aa		4.63	□□□□□ -1.67
PTPN12-210	ENST00000464313		H3BNC9	293 aa		4.63	□□□□□ -1.67
PTPN12-210	ENST00000464313	KAT7	O95251	611 aa		4.63	□□□□□ -1.67
PTPN12-210	ENST00000464313	CYP21A2	P08686	494 aa		4.63	□□□□□ -1.67
PTPN12-210	ENST00000464313	CST5	P28325	142 aa	Predicted RBP	4.63	□□□□□ -1.67
PTPN12-210	ENST00000464313	SERPINA4	P29622	427 aa		4.63	□□□□□ -1.67
PTPN12-210	ENST00000464313	TAS2R50	P59544	299 aa		4.63	□□□□□ -1.67
PTPN12-210	ENST00000464313	RPL15	P61313	204 aa	Known RBP	4.63	□□□□□ -1.67
PTPN12-210	ENST00000464313	SRSF4	Q08170	494 aa	Known RBP	4.63	□□□□□ -1.67
PTPN12-210	ENST00000464313	KPNB1	Q14974	876 aa	Known RBP	4.63	□□□□□ -1.67
PTPN12-210	ENST00000464313	CC2D1B	Q5T0F9	858 aa	Known RBP	4.63	□□□□□ -1.67
PTPN12-210	ENST00000464313	ZNF782	Q6ZMW2	699 aa	Predicted RBP	4.63	□□□□□ -1.67
PTPN12-210	ENST00000464313	SYNE3	Q6ZMZ3	975 aa		4.63	□□□□□ -1.67
PTPN12-210	ENST00000464313	MOGAT3	Q86VF5	341 aa		4.63	□□□□□ -1.67
PTPN12-210	ENST00000464313	AKAP1	Q92667	903 aa	Known RBP eCLIP	4.63	□□□□□ -1.67
PTPN12-210	ENST00000464313	FAR2	Q96K12	515 aa		4.63	□□□□□ -1.67
PTPN12-210	ENST00000464313	ISCA1	Q9BUE6	129 aa		4.63	□□□□□ -1.67
PTPN12-210	ENST00000464313	TAF1D	Q9H5J8	278 aa	Predicted RBP	4.63	□□□□□ -1.67
PTPN12-210	ENST00000464313	KCND3	Q9UK17	655 aa		4.63	□□□□□ -1.67
PTPN12-210	ENST00000464313	SLC12A4	Q9UP95	1085 aa		4.63	□□□□□ -1.67
PTPN12-210	ENST00000464313	ZBTB1	Q9Y2K1	713 aa		4.63	□□□□□ -1.67
PTPN12-210	ENST00000464313	DGKB	Q9Y6T7	804 aa		4.63	□□□□□ -1.67
PTPN12-210	ENST00000464313	CGB1	A6NKQ9	187 aa		4.62	□□□□□ -1.67
PTPN12-210	ENST00000464313	POC1B-GALNT4	F8VUJ3	575 aa		4.62	□□□□□ -1.67
PTPN12-210	ENST00000464313	PRY	O14603	147 aa		4.62	□□□□□ -1.67
PTPN12-210	ENST00000464313	NKX2-8	O15522	239 aa		4.62	□□□□□ -1.67
PTPN12-210	ENST00000464313	KRT38	O76015	456 aa		4.62	□□□□□ -1.67
PTPN12-210	ENST00000464313	HEXIM1	O94992	359 aa	Known RBP	4.62	□□□□□ -1.67
PTPN12-210	ENST00000464313	CYP2A6	P11509	494 aa	Predicted RBP	4.62	□□□□□ -1.67
PTPN12-210	ENST00000464313	MATN1	P21941	496 aa		4.62	□□□□□ -1.67
PTPN12-210	ENST00000464313	NDUFS1	P28331	727 aa		4.62	□□□□□ -1.67
PTPN12-210	ENST00000464313	DUSP1	P28562	367 aa		4.62	□□□□□ -1.67
PTPN12-210	ENST00000464313	STAT6	P42226	847 aa		4.62	□□□□□ -1.67
PTPN12-210	ENST00000464313	PPM1F	P49593	454 aa	Predicted RBP	4.62	□□□□□ -1.67
PTPN12-210	ENST00000464313	VPS41	P49754	854 aa		4.62	□□□□□ -1.67
PTPN12-210	ENST00000464313	AGTR2	P50052	363 aa		4.62	□□□□□ -1.67
PTPN12-210	ENST00000464313	POLE2	P56282	527 aa		4.62	□□□□□ -1.67
PTPN12-210	ENST00000464313	MAPK7	Q13164	816 aa		4.62	□□□□□ -1.67
PTPN12-210	ENST00000464313	PDCL	Q13371	301 aa		4.62	□□□□□ -1.67
PTPN12-210	ENST00000464313	CBFB	Q13951	182 aa		4.62	□□□□□ -1.67
PTPN12-210	ENST00000464313	SEC23B	Q15437	767 aa		4.62	□□□□□ -1.67
PTPN12-210	ENST00000464313	CNGA3	Q16281	694 aa		4.62	□□□□□ -1.67
PTPN12-210	ENST00000464313	ZNF788	Q6ZQV5	615 aa		4.62	□□□□□ -1.67
PTPN12-210	ENST00000464313	SYT13	Q7L8C5	426 aa		4.62	□□□□□ -1.67
PTPN12-210	ENST00000464313	C1QL2	Q7Z5L3	287 aa		4.62	□□□□□ -1.67
PTPN12-210	ENST00000464313	CERS3	Q8IU89	383 aa		4.62	□□□□□ -1.67
PTPN12-210	ENST00000464313	GALNT4	Q8N4A0	578 aa		4.62	□□□□□ -1.67
PTPN12-210	ENST00000464313	ADAMTS18	Q8TE60	1221 aa		4.62	□□□□□ -1.67
PTPN12-210	ENST00000464313	CLEC4C	Q8WTT0	213 aa		4.62	□□□□□ -1.67
PTPN12-210	ENST00000464313	GOLGA1	Q92805	767 aa		4.62	□□□□□ -1.67
PTPN12-210	ENST00000464313	TRIM63	Q969Q1	353 aa		4.62	□□□□□ -1.67
PTPN12-210	ENST00000464313	FYTTD1	Q96QD9	318 aa	Known RBP	4.62	□□□□□ -1.67
PTPN12-210	ENST00000464313	LIN7C	Q9NUP9	197 aa	Known RBP	4.62	□□□□□ -1.67
PTPN12-210	ENST00000464313	ASNSD1	Q9NWL6	643 aa		4.62	□□□□□ -1.67
PTPN12-210	ENST00000464313	SEMA5B	Q9P283	1151 aa		4.62	□□□□□ -1.67
PTPN12-210	ENST00000464313	NOL12	Q9UGY1	213 aa	Known RBP eCLIP	4.62	□□□□□ -1.67
PTPN12-210	ENST00000464313	FEM1B	Q9UK73	627 aa		4.62	□□□□□ -1.67
PTPN12-210	ENST00000464313	NFU1	Q9UMS0	254 aa		4.62	□□□□□ -1.67
PTPN12-210	ENST00000464313	RCE1	Q9Y256	329 aa		4.62	□□□□□ -1.67
PTPN12-210	ENST00000464313	EFCAB8	A8MWE9	144 aa		4.61	□□□□□ -1.67
PTPN12-210	ENST00000464313	BTBD19	C9JJ37	291 aa		4.61	□□□□□ -1.67
PTPN12-210	ENST00000464313	UBE2Q2L	H0YL09	131 aa		4.61	□□□□□ -1.67
PTPN12-210	ENST00000464313	IRAK2	O43187	625 aa		4.61	□□□□□ -1.67
PTPN12-210	ENST00000464313	FAM155B	O75949	473 aa		4.61	□□□□□ -1.67
PTPN12-210	ENST00000464313	LARGE1	O95461	756 aa		4.61	□□□□□ -1.67
PTPN12-210	ENST00000464313	SLC8A1	P32418	973 aa		4.61	□□□□□ -1.67
PTPN12-210	ENST00000464313	GRK5	P34947	590 aa		4.61	□□□□□ -1.67
PTPN12-210	ENST00000464313	LRRC24	Q50LG9	513 aa		4.61	□□□□□ -1.67
PTPN12-210	ENST00000464313	ZNF569	Q5MCW4	686 aa		4.61	□□□□□ -1.67
PTPN12-210	ENST00000464313	VSTM1	Q6UX27	236 aa		4.61	□□□□□ -1.67
PTPN12-210	ENST00000464313	KIAA1324	Q6UXG2	1013 aa	Known RBP	4.61	□□□□□ -1.67
PTPN12-210	ENST00000464313	RANBP10	Q6VN20	620 aa		4.61	□□□□□ -1.67
PTPN12-210	ENST00000464313	ZNF66	Q6ZN08	573 aa		4.61	□□□□□ -1.67
PTPN12-210	ENST00000464313	RASGRP2	Q7LDG7	609 aa		4.61	□□□□□ -1.67
PTPN12-210	ENST00000464313	TFAP2D	Q7Z6R9	452 aa		4.61	□□□□□ -1.67
PTPN12-210	ENST00000464313	FTSJ3	Q8IY81	847 aa	Known RBP	4.61	□□□□□ -1.67
PTPN12-210	ENST00000464313	PNISR	Q8TF01	805 aa	Known RBP	4.61	□□□□□ -1.67
PTPN12-210	ENST00000464313	AFG1L	Q8WV93	481 aa		4.61	□□□□□ -1.67
PTPN12-210	ENST00000464313	CPT1B	Q92523	772 aa		4.61	□□□□□ -1.67
PTPN12-210	ENST00000464313	HIC2	Q96JB3	615 aa		4.61	□□□□□ -1.67
PTPN12-210	ENST00000464313	GPR78	Q96P69	363 aa		4.61	□□□□□ -1.67
PTPN12-210	ENST00000464313	ASB2	Q96Q27	587 aa		4.61	□□□□□ -1.67
PTPN12-210	ENST00000464313	EFHD1	Q9BUP0	239 aa		4.61	□□□□□ -1.67

Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms