RNA–Protein interactions for RNA: ENST00000464275.5

PDLIM2-216, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,995 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-216ENST00000464275 RAD54BQ9Y620 910 aa22.43■■□□□ 1.18
PDLIM2-216ENST00000464275 NUP205Q92621 2012 aa22.43■■□□□ 1.18
PDLIM2-216ENST00000464275 CCT8L1PA6NM43 557 aa22.43■■□□□ 1.18
PDLIM2-216ENST00000464275 SYN3O14994 580 aa22.43■■□□□ 1.18
PDLIM2-216ENST00000464275 TADA2AO75478 443 aa22.43■■□□□ 1.18
PDLIM2-216ENST00000464275 DNAJC8O75937 253 aaPredicted RBP22.43■■□□□ 1.18
PDLIM2-216ENST00000464275 TPSB2P20231 275 aa22.43■■□□□ 1.18
PDLIM2-216ENST00000464275 TPI1P60174 286 aa22.43■■□□□ 1.18
PDLIM2-216ENST00000464275 GPNMBQ14956 572 aa22.43■■□□□ 1.18
PDLIM2-216ENST00000464275 PRKD1Q15139 912 aaPredicted RBP22.43■■□□□ 1.18
PDLIM2-216ENST00000464275 TPSAB1Q15661 275 aa22.43■■□□□ 1.18
PDLIM2-216ENST00000464275 KLHL38Q2WGJ6 581 aa22.43■■□□□ 1.18
PDLIM2-216ENST00000464275 SLC39A12Q504Y0 691 aa22.43■■□□□ 1.18
PDLIM2-216ENST00000464275 ARHGEF18Q6ZSZ5 1173 aa22.43■■□□□ 1.18
PDLIM2-216ENST00000464275 SEPT8Q92599 483 aa22.43■■□□□ 1.18
PDLIM2-216ENST00000464275 ANLNQ9NQW6 1124 aa22.43■■□□□ 1.18
PDLIM2-216ENST00000464275 TEX264Q9Y6I9 313 aa22.43■■□□□ 1.18
PDLIM2-216ENST00000464275 PITPNM1O00562 1244 aa22.42■■□□□ 1.18
PDLIM2-216ENST00000464275 TNFRSF10BO14763 440 aa22.42■■□□□ 1.18
PDLIM2-216ENST00000464275 PPP1R12AO14974 1030 aaPredicted RBP22.42■■□□□ 1.18
PDLIM2-216ENST00000464275 VAV1P15498 845 aa22.42■■□□□ 1.18
PDLIM2-216ENST00000464275 ELK3P41970 407 aa22.42■■□□□ 1.18
PDLIM2-216ENST00000464275 GLUD2P49448 558 aa22.42■■□□□ 1.18
PDLIM2-216ENST00000464275 FAXCQ5TGI0 409 aa22.42■■□□□ 1.18
PDLIM2-216ENST00000464275 VSTM1Q6UX27 236 aa22.42■■□□□ 1.18
PDLIM2-216ENST00000464275 TAC4Q86UU9 113 aa22.42■■□□□ 1.18
PDLIM2-216ENST00000464275 CCDC33Q8N5R6 958 aa22.42■■□□□ 1.18
PDLIM2-216ENST00000464275 APBB2Q92870 758 aa22.42■■□□□ 1.18
PDLIM2-216ENST00000464275 ACSS3Q9H6R3 686 aa22.42■■□□□ 1.18
PDLIM2-216ENST00000464275 CHMP2BQ9UQN3 213 aa22.42■■□□□ 1.18
PDLIM2-216ENST00000464275 A0A0A0MRY4 1105 aa22.41■■□□□ 1.18
PDLIM2-216ENST00000464275 FAM72CH0Y354 149 aa22.41■■□□□ 1.18
PDLIM2-216ENST00000464275 SPAG6O75602 509 aa22.41■■□□□ 1.18
PDLIM2-216ENST00000464275 STK10O94804 968 aaKnown RBP22.41■■□□□ 1.18
PDLIM2-216ENST00000464275 METTL18O95568 372 aa22.41■■□□□ 1.18
PDLIM2-216ENST00000464275 ERCC2P18074 760 aa22.41■■□□□ 1.18
PDLIM2-216ENST00000464275 SCTRP47872 440 aa22.41■■□□□ 1.18
PDLIM2-216ENST00000464275 SLC5A3P53794 718 aa22.41■■□□□ 1.18
PDLIM2-216ENST00000464275 GEMIN4P57678 1058 aaKnown RBP22.41■■□□□ 1.18
PDLIM2-216ENST00000464275 YWHAGP61981 247 aaKnown RBP eCLIP22.41■■□□□ 1.18
PDLIM2-216ENST00000464275 NFE2Q16621 373 aaPredicted RBP22.41■■□□□ 1.18
PDLIM2-216ENST00000464275 FAM72AQ5TYM5 149 aa22.41■■□□□ 1.18
PDLIM2-216ENST00000464275 FAM72DQ6L9T8 149 aa22.41■■□□□ 1.18
PDLIM2-216ENST00000464275 FAM72BQ86X60 149 aa22.41■■□□□ 1.18
PDLIM2-216ENST00000464275 SCAMP5Q8TAC9 235 aa22.41■■□□□ 1.18
PDLIM2-216ENST00000464275 DQX1Q8TE96 717 aaKnown RBP22.41■■□□□ 1.18
PDLIM2-216ENST00000464275 FUBP3Q96I24 572 aaKnown RBP eCLIP22.41■■□□□ 1.18
PDLIM2-216ENST00000464275 SPATA13Q96N96 652 aa22.41■■□□□ 1.18
PDLIM2-216ENST00000464275 PRMT1Q99873 361 aaKnown RBP22.41■■□□□ 1.18
PDLIM2-216ENST00000464275 ABCC13Q9NSE7 274 aa22.41■■□□□ 1.18
PDLIM2-216ENST00000464275 PSMC3IPQ9P2W1 217 aaPredicted RBP22.41■■□□□ 1.18
PDLIM2-216ENST00000464275 GREB1Q4ZG55 1949 aa22.41■■□□□ 1.18
PDLIM2-216ENST00000464275 TMEM120BA0PK00 339 aa22.41■■□□□ 1.18
PDLIM2-216ENST00000464275 I6L893 689 aaPredicted RBP22.41■■□□□ 1.18
PDLIM2-216ENST00000464275 APRTP07741 180 aa22.41■■□□□ 1.18
PDLIM2-216ENST00000464275 OR4Q2P0C623 313 aa22.41■■□□□ 1.18
PDLIM2-216ENST00000464275 BRAFP15056 766 aa22.41■■□□□ 1.18
PDLIM2-216ENST00000464275 FDFT1P37268 417 aa22.41■■□□□ 1.18
PDLIM2-216ENST00000464275 ANKRD20A2Q5SQ80 823 aa22.41■■□□□ 1.18
PDLIM2-216ENST00000464275 ANKRD20A1Q5TYW2 823 aa22.41■■□□□ 1.18
PDLIM2-216ENST00000464275 ANKRD20A3Q5VUR7 823 aa22.41■■□□□ 1.18
PDLIM2-216ENST00000464275 LRRC34Q8IZ02 419 aa22.41■■□□□ 1.18
PDLIM2-216ENST00000464275 FBF1Q8TES7 1133 aa22.41■■□□□ 1.18
PDLIM2-216ENST00000464275 LGMNQ99538 433 aa22.41■■□□□ 1.18
PDLIM2-216ENST00000464275 TKTL2Q9H0I9 626 aa22.41■■□□□ 1.18
PDLIM2-216ENST00000464275 LRFN2Q9ULH4 789 aa22.41■■□□□ 1.18
PDLIM2-216ENST00000464275 MICAL3Q7RTP6 2002 aa22.4■■□□□ 1.18
PDLIM2-216ENST00000464275 IGLV3-25P01717 112 aa22.4■■□□□ 1.18
PDLIM2-216ENST00000464275 CREB1P16220 341 aa22.4■■□□□ 1.18
PDLIM2-216ENST00000464275 AP1B1Q10567 949 aa22.4■■□□□ 1.18
PDLIM2-216ENST00000464275 SEMA5AQ13591 1074 aa22.4■■□□□ 1.18
PDLIM2-216ENST00000464275 SYCP2LQ5T4T6 812 aa22.4■■□□□ 1.18
PDLIM2-216ENST00000464275 BTBD8Q5XKL5 378 aa22.4■■□□□ 1.18
PDLIM2-216ENST00000464275 TRABD2AQ86V40 505 aa22.4■■□□□ 1.18
PDLIM2-216ENST00000464275 SRRM1Q8IYB3 904 aaKnown RBP22.4■■□□□ 1.18
PDLIM2-216ENST00000464275 CASD1Q96PB1 797 aa22.4■■□□□ 1.18
PDLIM2-216ENST00000464275 EPAS1Q99814 870 aa22.4■■□□□ 1.18
PDLIM2-216ENST00000464275 KCNK9Q9NPC2 374 aa22.4■■□□□ 1.18
PDLIM2-216ENST00000464275 KLC4Q9NSK0 619 aa22.4■■□□□ 1.18
PDLIM2-216ENST00000464275 RASA4BC9J798 803 aa22.39■■□□□ 1.18
PDLIM2-216ENST00000464275 RASA4O43374 803 aa22.39■■□□□ 1.18
PDLIM2-216ENST00000464275 CYP2C18P33260 490 aa22.39■■□□□ 1.18
PDLIM2-216ENST00000464275 VARS2Q5ST30 1063 aaKnown RBP22.39■■□□□ 1.18
PDLIM2-216ENST00000464275 FAM182AQ5T1J6 154 aa22.39■■□□□ 1.18
PDLIM2-216ENST00000464275 CAND1Q86VP6 1230 aaKnown RBP22.39■■□□□ 1.18
PDLIM2-216ENST00000464275 IGDCC3Q8IVU1 814 aa22.39■■□□□ 1.18
PDLIM2-216ENST00000464275 SCN4BQ8IWT1 228 aa22.39■■□□□ 1.18
PDLIM2-216ENST00000464275 RNF34Q969K3 372 aa22.39■■□□□ 1.18
PDLIM2-216ENST00000464275 LRRC39Q96DD0 335 aa22.39■■□□□ 1.18
PDLIM2-216ENST00000464275 SLC40A1Q9NP59 571 aa22.39■■□□□ 1.18
PDLIM2-216ENST00000464275 ABI2Q9NYB9 513 aaPredicted RBP22.39■■□□□ 1.18
PDLIM2-216ENST00000464275 SENP1Q9P0U3 644 aa22.39■■□□□ 1.18
PDLIM2-216ENST00000464275 ADAM28Q9UKQ2 775 aa22.39■■□□□ 1.18
PDLIM2-216ENST00000464275 FOXO6A8MYZ6 492 aa22.39■■□□□ 1.17
PDLIM2-216ENST00000464275 OPHN1O60890 802 aa22.39■■□□□ 1.17
PDLIM2-216ENST00000464275 AMHP03971 560 aa22.39■■□□□ 1.17
PDLIM2-216ENST00000464275 VIMP08670 466 aaKnown RBP22.39■■□□□ 1.17
PDLIM2-216ENST00000464275 EIF4EBP2Q13542 120 aaPredicted RBP22.39■■□□□ 1.17
PDLIM2-216ENST00000464275 DYDC1Q8WWB3 177 aa22.39■■□□□ 1.17
PDLIM2-216ENST00000464275 P2RY11Q96G91 374 aa22.39■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms