RNA–Protein interactions for RNA: ENST00000463013.1

KDM3A-208, Transcript of lysine demethylase 3A, human

TSL 3

Gene KDM3A, Length 577 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KDM3A-208	ENST00000463013	MCRS1	Q96EZ8	462 aa		4.28	□□□□□ -1.72
KDM3A-208	ENST00000463013	MLXIPL	Q9NP71	852 aa		4.28	□□□□□ -1.72
KDM3A-208	ENST00000463013	OBP2B	Q9NPH6	170 aa		4.28	□□□□□ -1.72
KDM3A-208	ENST00000463013	PLCB1	Q9NQ66	1216 aa		4.28	□□□□□ -1.72
KDM3A-208	ENST00000463013	TRNAU1AP	Q9NX07	287 aa	Known RBP	4.28	□□□□□ -1.72
KDM3A-208	ENST00000463013	NFU1	Q9UMS0	254 aa		4.28	□□□□□ -1.72
KDM3A-208	ENST00000463013	PCDHB7	Q9Y5E2	793 aa		4.28	□□□□□ -1.72
KDM3A-208	ENST00000463013	LOC105369274	A0A096LPK9	316 aa		4.27	□□□□□ -1.73
KDM3A-208	ENST00000463013	LOC102723532	A0A0G2JNH3	316 aa		4.27	□□□□□ -1.73
KDM3A-208	ENST00000463013	C2CD4B	A6NLJ0	364 aa		4.27	□□□□□ -1.73
KDM3A-208	ENST00000463013	LGALS16	A8MUM7	142 aa		4.27	□□□□□ -1.73
KDM3A-208	ENST00000463013	ADAM10	O14672	748 aa		4.27	□□□□□ -1.73
KDM3A-208	ENST00000463013	PPEF2	O14830	753 aa		4.27	□□□□□ -1.73
KDM3A-208	ENST00000463013	NKX2-8	O15522	239 aa		4.27	□□□□□ -1.73
KDM3A-208	ENST00000463013	DNPH1	O43598	174 aa		4.27	□□□□□ -1.73
KDM3A-208	ENST00000463013	SKAP2	O75563	359 aa	Predicted RBP	4.27	□□□□□ -1.73
KDM3A-208	ENST00000463013	RPP40	O75818	363 aa	Known RBP	4.27	□□□□□ -1.73
KDM3A-208	ENST00000463013	CD63	P08962	238 aa		4.27	□□□□□ -1.73
KDM3A-208	ENST00000463013	CTSA	P10619	480 aa		4.27	□□□□□ -1.73
KDM3A-208	ENST00000463013	RPS6KB1	P23443	525 aa		4.27	□□□□□ -1.73
KDM3A-208	ENST00000463013	HOXD9	P28356	352 aa	Predicted RBP	4.27	□□□□□ -1.73
KDM3A-208	ENST00000463013	HOXA7	P31268	230 aa	Predicted RBP	4.27	□□□□□ -1.73
KDM3A-208	ENST00000463013	AKT1	P31749	480 aa		4.27	□□□□□ -1.73
KDM3A-208	ENST00000463013	ID2	Q02363	134 aa		4.27	□□□□□ -1.73
KDM3A-208	ENST00000463013	ZNF91	Q05481	1191 aa		4.27	□□□□□ -1.73
KDM3A-208	ENST00000463013	DMWD	Q09019	674 aa		4.27	□□□□□ -1.73
KDM3A-208	ENST00000463013	PTK2B	Q14289	1009 aa		4.27	□□□□□ -1.73
KDM3A-208	ENST00000463013	PFKFB4	Q16877	469 aa		4.27	□□□□□ -1.73
KDM3A-208	ENST00000463013	AAK1	Q2M2I8	961 aa		4.27	□□□□□ -1.73
KDM3A-208	ENST00000463013	SLC9C1	Q4G0N8	1177 aa		4.27	□□□□□ -1.73
KDM3A-208	ENST00000463013	EARS2	Q5JPH6	523 aa	Known RBP	4.27	□□□□□ -1.73
KDM3A-208	ENST00000463013	C10orf25	Q5T742	122 aa		4.27	□□□□□ -1.73
KDM3A-208	ENST00000463013	PXDC1	Q5TGL8	231 aa		4.27	□□□□□ -1.73
KDM3A-208	ENST00000463013	GGT6	Q6P531	493 aa		4.27	□□□□□ -1.73
KDM3A-208	ENST00000463013	C1orf228	Q6PIY5	440 aa		4.27	□□□□□ -1.73
KDM3A-208	ENST00000463013	UEVLD	Q8IX04	471 aa		4.27	□□□□□ -1.73
KDM3A-208	ENST00000463013	OR4N4	Q8N0Y3	316 aa		4.27	□□□□□ -1.73
KDM3A-208	ENST00000463013	SPICE1	Q8N0Z3	855 aa		4.27	□□□□□ -1.73
KDM3A-208	ENST00000463013	BCAS4	Q8TDM0	211 aa		4.27	□□□□□ -1.73
KDM3A-208	ENST00000463013	IGFBPL1	Q8WX77	278 aa		4.27	□□□□□ -1.73
KDM3A-208	ENST00000463013	MPHOSPH6	Q99547	160 aa	Known RBP	4.27	□□□□□ -1.73
KDM3A-208	ENST00000463013	TMEM79	Q9BSE2	394 aa		4.27	□□□□□ -1.73
KDM3A-208	ENST00000463013	CRB3	Q9BUF7	120 aa		4.27	□□□□□ -1.73
KDM3A-208	ENST00000463013	TRIM2	Q9C040	744 aa		4.27	□□□□□ -1.73
KDM3A-208	ENST00000463013	SPRTN	Q9H040	489 aa	Predicted RBP	4.27	□□□□□ -1.73
KDM3A-208	ENST00000463013	MTMR4	Q9NYA4	1195 aa		4.27	□□□□□ -1.73
KDM3A-208	ENST00000463013	DAAM1	Q9Y4D1	1078 aa		4.27	□□□□□ -1.73
KDM3A-208	ENST00000463013	SLC22A23	A1A5C7	686 aa		4.26	□□□□□ -1.73
KDM3A-208	ENST00000463013	SYT5	O00445	386 aa		4.26	□□□□□ -1.73
KDM3A-208	ENST00000463013	TLR2	O60603	784 aa		4.26	□□□□□ -1.73
KDM3A-208	ENST00000463013	CNOT3	O75175	753 aa	Known RBP	4.26	□□□□□ -1.73
KDM3A-208	ENST00000463013	TNFRSF6B	O95407	300 aa		4.26	□□□□□ -1.73
KDM3A-208	ENST00000463013	FGB	P02675	491 aa		4.26	□□□□□ -1.73
KDM3A-208	ENST00000463013	ENO1	P06733	434 aa	Known RBP	4.26	□□□□□ -1.73
KDM3A-208	ENST00000463013	ST6GAL1	P15907	406 aa		4.26	□□□□□ -1.73
KDM3A-208	ENST00000463013	PDIA3	P30101	505 aa	Known RBP	4.26	□□□□□ -1.73
KDM3A-208	ENST00000463013	PTGER1	P34995	402 aa		4.26	□□□□□ -1.73
KDM3A-208	ENST00000463013	SOX2	P48431	317 aa		4.26	□□□□□ -1.73
KDM3A-208	ENST00000463013	SLC12A2	P55011	1212 aa		4.26	□□□□□ -1.73
KDM3A-208	ENST00000463013	GALNT1	Q10472	559 aa	Predicted RBP	4.26	□□□□□ -1.73
KDM3A-208	ENST00000463013	MTA1	Q13330	715 aa		4.26	□□□□□ -1.73
KDM3A-208	ENST00000463013	STIM1	Q13586	685 aa		4.26	□□□□□ -1.73
KDM3A-208	ENST00000463013	MORC3	Q14149	939 aa		4.26	□□□□□ -1.73
KDM3A-208	ENST00000463013	RABEP1	Q15276	862 aa		4.26	□□□□□ -1.73
KDM3A-208	ENST00000463013	PUM3	Q15397	648 aa	Known RBP	4.26	□□□□□ -1.73
KDM3A-208	ENST00000463013	ZACN	Q401N2	412 aa		4.26	□□□□□ -1.73
KDM3A-208	ENST00000463013	ANKRD40	Q6AI12	368 aa		4.26	□□□□□ -1.73
KDM3A-208	ENST00000463013	WDR93	Q6P2C0	686 aa		4.26	□□□□□ -1.73
KDM3A-208	ENST00000463013	SHC4	Q6S5L8	630 aa		4.26	□□□□□ -1.73
KDM3A-208	ENST00000463013	NANOGP1	Q8N7R0	232 aa		4.26	□□□□□ -1.73
KDM3A-208	ENST00000463013	C16orf52	Q8NHV5	167 aa		4.26	□□□□□ -1.73
KDM3A-208	ENST00000463013	WASF1	Q92558	559 aa		4.26	□□□□□ -1.73
KDM3A-208	ENST00000463013	RSC1A1	Q92681	617 aa		4.26	□□□□□ -1.73
KDM3A-208	ENST00000463013	EID2B	Q96D98	161 aa		4.26	□□□□□ -1.73
KDM3A-208	ENST00000463013	TRMT61A	Q96FX7	289 aa	Known RBP	4.26	□□□□□ -1.73
KDM3A-208	ENST00000463013	GPR78	Q96P69	363 aa		4.26	□□□□□ -1.73
KDM3A-208	ENST00000463013	ERVK-5	Q9HDB9	667 aa		4.26	□□□□□ -1.73
KDM3A-208	ENST00000463013	TMEM184C	Q9NVA4	438 aa		4.26	□□□□□ -1.73
KDM3A-208	ENST00000463013	ELOVL5	Q9NYP7	299 aa		4.26	□□□□□ -1.73
KDM3A-208	ENST00000463013	TAGLN3	Q9UI15	199 aa		4.26	□□□□□ -1.73
KDM3A-208	ENST00000463013	B3GNT3	Q9Y2A9	372 aa		4.26	□□□□□ -1.73
KDM3A-208	ENST00000463013	ZBTB1	Q9Y2K1	713 aa		4.26	□□□□□ -1.73
KDM3A-208	ENST00000463013	ZMYM2	Q9UBW7	1377 aa		4.26	□□□□□ -1.73
KDM3A-208	ENST00000463013	EMSY	Q7Z589	1322 aa		4.25	□□□□□ -1.73
KDM3A-208	ENST00000463013	KIF28P	B7ZC32	967 aa		4.25	□□□□□ -1.73
KDM3A-208	ENST00000463013		M0QYT0	321 aa		4.25	□□□□□ -1.73
KDM3A-208	ENST00000463013	KAT7	O95251	611 aa		4.25	□□□□□ -1.73
KDM3A-208	ENST00000463013	SGPL1	O95470	568 aa		4.25	□□□□□ -1.73
KDM3A-208	ENST00000463013	TFEB	P19484	476 aa		4.25	□□□□□ -1.73
KDM3A-208	ENST00000463013	CPA2	P48052	419 aa		4.25	□□□□□ -1.73
KDM3A-208	ENST00000463013	TLE3	Q04726	772 aa		4.25	□□□□□ -1.73
KDM3A-208	ENST00000463013	ICA1	Q05084	483 aa		4.25	□□□□□ -1.73
KDM3A-208	ENST00000463013	TRIM60	Q495X7	471 aa		4.25	□□□□□ -1.73
KDM3A-208	ENST00000463013	ZNF474	Q6S9Z5	364 aa	Predicted RBP	4.25	□□□□□ -1.73
KDM3A-208	ENST00000463013	DHRS13	Q6UX07	377 aa		4.25	□□□□□ -1.73
KDM3A-208	ENST00000463013	MYLK4	Q86YV6	388 aa	Predicted RBP	4.25	□□□□□ -1.73
KDM3A-208	ENST00000463013	SRFBP1	Q8NEF9	429 aa	Known RBP	4.25	□□□□□ -1.73
KDM3A-208	ENST00000463013	WIPF2	Q8TF74	440 aa	Predicted RBP	4.25	□□□□□ -1.73
KDM3A-208	ENST00000463013	REXO5	Q96IC2	774 aa	Known RBP	4.25	□□□□□ -1.73
KDM3A-208	ENST00000463013	KATNAL1	Q9BW62	490 aa		4.25	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms