RNA–Protein interactions for RNA: ENST00000462715.1

TRAPPC3-205, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2

Gene TRAPPC3, Length 2,428 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-205ENST00000462715 GIN1Q9NXP7 522 aa11.85□□□□□ -0.51
TRAPPC3-205ENST00000462715 KCNK4Q9NYG8 393 aa11.85□□□□□ -0.51
TRAPPC3-205ENST00000462715 PPM1HQ9ULR3 514 aa11.85□□□□□ -0.51
TRAPPC3-205ENST00000462715 EXOC7Q9UPT5 735 aa11.85□□□□□ -0.51
TRAPPC3-205ENST00000462715 PIN4Q9Y237 131 aaKnown RBP11.85□□□□□ -0.51
TRAPPC3-205ENST00000462715 COQ6Q9Y2Z9 468 aa11.85□□□□□ -0.51
TRAPPC3-205ENST00000462715 ZBBXA8MT70 800 aa11.84□□□□□ -0.51
TRAPPC3-205ENST00000462715 LSM1O15116 133 aaKnown RBP11.84□□□□□ -0.51
TRAPPC3-205ENST00000462715 PRKCBP05771 671 aa11.84□□□□□ -0.51
TRAPPC3-205ENST00000462715 ATF2P15336 505 aa11.84□□□□□ -0.51
TRAPPC3-205ENST00000462715 POLR2EP19388 210 aaKnown RBP11.84□□□□□ -0.51
TRAPPC3-205ENST00000462715 CHKAP35790 457 aa11.84□□□□□ -0.51
TRAPPC3-205ENST00000462715 FDFT1P37268 417 aa11.84□□□□□ -0.51
TRAPPC3-205ENST00000462715 KRT17Q04695 432 aa11.84□□□□□ -0.51
TRAPPC3-205ENST00000462715 ZNF211Q13398 564 aaPredicted RBP11.84□□□□□ -0.51
TRAPPC3-205ENST00000462715 FAM187BQ17R55 369 aa11.84□□□□□ -0.51
TRAPPC3-205ENST00000462715 EFHC1Q5JVL4 640 aa11.84□□□□□ -0.51
TRAPPC3-205ENST00000462715 CHRDL2Q6WN34 429 aa11.84□□□□□ -0.51
TRAPPC3-205ENST00000462715 STXBP4Q6ZWJ1 553 aa11.84□□□□□ -0.51
TRAPPC3-205ENST00000462715 TMEM161BQ8NDZ6 487 aa11.84□□□□□ -0.51
TRAPPC3-205ENST00000462715 FZD8Q9H461 694 aa11.84□□□□□ -0.51
TRAPPC3-205ENST00000462715 KIAA1586Q9HCI6 787 aa11.84□□□□□ -0.51
TRAPPC3-205ENST00000462715 SIX2Q9NPC8 291 aa11.84□□□□□ -0.51
TRAPPC3-205ENST00000462715 C6orf203Q9P0P8 240 aaPredicted RBP11.84□□□□□ -0.51
TRAPPC3-205ENST00000462715 DKK3Q9UBP4 350 aa11.84□□□□□ -0.51
TRAPPC3-205ENST00000462715 SLC7A8Q9UHI5 535 aa11.84□□□□□ -0.51
TRAPPC3-205ENST00000462715 TET1Q8NFU7 2136 aa11.84□□□□□ -0.51
TRAPPC3-205ENST00000462715 CCDC160A6NGH7 325 aa11.84□□□□□ -0.51
TRAPPC3-205ENST00000462715 ACKR2O00590 384 aa11.84□□□□□ -0.51
TRAPPC3-205ENST00000462715 FCHO1O14526 889 aa11.84□□□□□ -0.51
TRAPPC3-205ENST00000462715 VCPP55072 806 aaKnown RBP11.84□□□□□ -0.51
TRAPPC3-205ENST00000462715 CENPCQ03188 943 aa11.84□□□□□ -0.51
TRAPPC3-205ENST00000462715 ALCAMQ13740 583 aa11.84□□□□□ -0.51
TRAPPC3-205ENST00000462715 TMEM132AQ24JP5 1023 aa11.84□□□□□ -0.51
TRAPPC3-205ENST00000462715 NOTUMQ6P988 496 aa11.84□□□□□ -0.51
TRAPPC3-205ENST00000462715 LVRNQ6Q4G3 990 aa11.84□□□□□ -0.51
TRAPPC3-205ENST00000462715 HAUS6Q7Z4H7 955 aa11.84□□□□□ -0.51
TRAPPC3-205ENST00000462715 ZNF276Q8N554 614 aa11.84□□□□□ -0.51
TRAPPC3-205ENST00000462715 METTL25Q8N6Q8 603 aa11.84□□□□□ -0.51
TRAPPC3-205ENST00000462715 ARL10Q8N8L6 244 aa11.84□□□□□ -0.51
TRAPPC3-205ENST00000462715 CCDC89Q8N998 374 aa11.84□□□□□ -0.51
TRAPPC3-205ENST00000462715 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.84□□□□□ -0.51
TRAPPC3-205ENST00000462715 GDPD5Q8WTR4 605 aa11.84□□□□□ -0.51
TRAPPC3-205ENST00000462715 STARD8Q92502 1023 aa11.84□□□□□ -0.51
TRAPPC3-205ENST00000462715 SPOCK2Q92563 424 aa11.84□□□□□ -0.51
TRAPPC3-205ENST00000462715 TMEM120AQ9BXJ8 343 aa11.84□□□□□ -0.51
TRAPPC3-205ENST00000462715 ST6GALNAC4Q9H4F1 302 aa11.84□□□□□ -0.51
TRAPPC3-205ENST00000462715 TRPC7Q9HCX4 862 aa11.84□□□□□ -0.51
TRAPPC3-205ENST00000462715 C1orf112Q9NSG2 853 aa11.84□□□□□ -0.51
TRAPPC3-205ENST00000462715 RRN3Q9NYV6 651 aa11.84□□□□□ -0.51
TRAPPC3-205ENST00000462715 IGSF9Q9P2J2 1179 aa11.84□□□□□ -0.51
TRAPPC3-205ENST00000462715 GRID1Q9ULK0 1009 aa11.84□□□□□ -0.51
TRAPPC3-205ENST00000462715 TSC22D4Q9Y3Q8 395 aa11.84□□□□□ -0.51
TRAPPC3-205ENST00000462715 NEU2Q9Y3R4 380 aa11.84□□□□□ -0.51
TRAPPC3-205ENST00000462715 CNTNAP2Q9UHC6 1331 aa11.83□□□□□ -0.52
TRAPPC3-205ENST00000462715 EXOC1LA0A1B0GW35 172 aa11.83□□□□□ -0.52
TRAPPC3-205ENST00000462715 TSPAN1O60635 241 aa11.83□□□□□ -0.52
TRAPPC3-205ENST00000462715 AMHP03971 560 aa11.83□□□□□ -0.52
TRAPPC3-205ENST00000462715 C8BP07358 591 aa11.83□□□□□ -0.52
TRAPPC3-205ENST00000462715 RPA3P35244 121 aaPredicted RBP11.83□□□□□ -0.52
TRAPPC3-205ENST00000462715 ITGA8P53708 1063 aa11.83□□□□□ -0.52
TRAPPC3-205ENST00000462715 DLG1Q12959 904 aa11.83□□□□□ -0.52
TRAPPC3-205ENST00000462715 TGFBIQ15582 683 aa11.83□□□□□ -0.52
TRAPPC3-205ENST00000462715 SLC1A5Q15758 541 aa11.83□□□□□ -0.52
TRAPPC3-205ENST00000462715 ZNF829Q3KNS6 432 aaPredicted RBP11.83□□□□□ -0.52
TRAPPC3-205ENST00000462715 ZNF362Q5T0B9 420 aaPredicted RBP11.83□□□□□ -0.52
TRAPPC3-205ENST00000462715 TMC7Q7Z402 723 aa11.83□□□□□ -0.52
TRAPPC3-205ENST00000462715 ADAT2Q7Z6V5 191 aaKnown RBP11.83□□□□□ -0.52
TRAPPC3-205ENST00000462715 ZDHHC14Q8IZN3 488 aa11.83□□□□□ -0.52
TRAPPC3-205ENST00000462715 RFWD2Q8NHY2 731 aa11.83□□□□□ -0.52
TRAPPC3-205ENST00000462715 ANKRD36BP1Q96IX9 119 aa11.83□□□□□ -0.52
TRAPPC3-205ENST00000462715 ADAM2Q99965 735 aa11.83□□□□□ -0.52
TRAPPC3-205ENST00000462715 TSSK1BQ9BXA7 367 aa11.83□□□□□ -0.52
TRAPPC3-205ENST00000462715 MRPL4Q9BYD3 311 aaKnown RBP11.83□□□□□ -0.52
TRAPPC3-205ENST00000462715 MRPL46Q9H2W6 279 aaKnown RBP11.83□□□□□ -0.52
TRAPPC3-205ENST00000462715 MANSC1Q9H8J5 431 aa11.83□□□□□ -0.52
TRAPPC3-205ENST00000462715 KCNK13Q9HB14 408 aa11.83□□□□□ -0.52
TRAPPC3-205ENST00000462715 VPS45Q9NRW7 570 aa11.83□□□□□ -0.52
TRAPPC3-205ENST00000462715 ASIC3Q9UHC3 531 aa11.83□□□□□ -0.52
TRAPPC3-205ENST00000462715 ITM2AO43736 263 aa11.82□□□□□ -0.52
TRAPPC3-205ENST00000462715 KDM1AO60341 852 aa11.82□□□□□ -0.52
TRAPPC3-205ENST00000462715 PGM3O95394 542 aa11.82□□□□□ -0.52
TRAPPC3-205ENST00000462715 DLDP09622 509 aaKnown RBP11.82□□□□□ -0.52
TRAPPC3-205ENST00000462715 ZNF23P17027 643 aa11.82□□□□□ -0.52
TRAPPC3-205ENST00000462715 SLC9A1P19634 815 aa11.82□□□□□ -0.52
TRAPPC3-205ENST00000462715 HMOX2P30519 316 aa11.82□□□□□ -0.52
TRAPPC3-205ENST00000462715 AQP4P55087 323 aa11.82□□□□□ -0.52
TRAPPC3-205ENST00000462715 RPS3AP61247 264 aaKnown RBP11.82□□□□□ -0.52
TRAPPC3-205ENST00000462715 NAA20P61599 178 aa11.82□□□□□ -0.52
TRAPPC3-205ENST00000462715 CAMK2BQ13554 666 aa11.82□□□□□ -0.52
TRAPPC3-205ENST00000462715 SEPT6Q14141 434 aa11.82□□□□□ -0.52
TRAPPC3-205ENST00000462715 SHHQ15465 462 aa11.82□□□□□ -0.52
TRAPPC3-205ENST00000462715 AMHR2Q16671 573 aa11.82□□□□□ -0.52
TRAPPC3-205ENST00000462715 TWF2Q6IBS0 349 aaKnown RBP11.82□□□□□ -0.52
TRAPPC3-205ENST00000462715 PEX5LQ8IYB4 626 aa11.82□□□□□ -0.52
TRAPPC3-205ENST00000462715 TDHQ8IZJ6 230 aa11.82□□□□□ -0.52
TRAPPC3-205ENST00000462715 ZCCHC9Q8N567 271 aaKnown RBP11.82□□□□□ -0.52
TRAPPC3-205ENST00000462715 OLFM1Q99784 485 aa11.82□□□□□ -0.52
TRAPPC3-205ENST00000462715 RGS18Q9NS28 235 aa11.82□□□□□ -0.52
TRAPPC3-205ENST00000462715 TBK1Q9UHD2 729 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms