RNA–Protein interactions for RNA: ENST00000462421.1

DDX39B-216, Transcript of DExD-box helicase 39B, humanhuman

TSL 3

Gene DDX39B, Length 618 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-216ENST00000462421 HRO43593 1189 aa9.28□□□□□ -0.92
DDX39B-216ENST00000462421 DAB1O75553 588 aa9.28□□□□□ -0.92
DDX39B-216ENST00000462421 GRAP2O75791 330 aa9.28□□□□□ -0.92
DDX39B-216ENST00000462421 PENKP01210 267 aaPredicted RBP9.28□□□□□ -0.92
DDX39B-216ENST00000462421 CALCAP01258 141 aa9.28□□□□□ -0.92
DDX39B-216ENST00000462421 CALB1P05937 261 aa9.28□□□□□ -0.92
DDX39B-216ENST00000462421 FERP16591 822 aa9.28□□□□□ -0.92
DDX39B-216ENST00000462421 OXTRP30559 389 aa9.28□□□□□ -0.92
DDX39B-216ENST00000462421 NOS2P35228 1153 aa9.28□□□□□ -0.92
DDX39B-216ENST00000462421 SOX5P35711 763 aa9.28□□□□□ -0.92
DDX39B-216ENST00000462421 MPLP40238 635 aa9.28□□□□□ -0.92
DDX39B-216ENST00000462421 PGFP49763 221 aa9.28□□□□□ -0.92
DDX39B-216ENST00000462421 DEUP1Q05D60 604 aa9.28□□□□□ -0.92
DDX39B-216ENST00000462421 SULT2A1Q06520 285 aa9.28□□□□□ -0.92
DDX39B-216ENST00000462421 ZNF177Q13360 481 aaPredicted RBP9.28□□□□□ -0.92
DDX39B-216ENST00000462421 PUM1Q14671 1186 aaKnown RBP eCLIP9.28□□□□□ -0.92
DDX39B-216ENST00000462421 CSRP2Q16527 193 aa9.28□□□□□ -0.92
DDX39B-216ENST00000462421 MIIPQ5JXC2 388 aa9.28□□□□□ -0.92
DDX39B-216ENST00000462421 WDR45BQ5MNZ6 344 aa9.28□□□□□ -0.92
DDX39B-216ENST00000462421 CDKAL1Q5VV42 579 aa9.28□□□□□ -0.92
DDX39B-216ENST00000462421 FYB2Q5VWT5 728 aa9.28□□□□□ -0.92
DDX39B-216ENST00000462421 NAA35Q5VZE5 725 aa9.28□□□□□ -0.92
DDX39B-216ENST00000462421 LYSMD4Q5XG99 296 aa9.28□□□□□ -0.92
DDX39B-216ENST00000462421 EGFLAMQ63HQ2 1017 aa9.28□□□□□ -0.92
DDX39B-216ENST00000462421 PKN3Q6P5Z2 889 aa9.28□□□□□ -0.92
DDX39B-216ENST00000462421 DGLUCYQ7Z3D6 616 aa9.28□□□□□ -0.92
DDX39B-216ENST00000462421 TAC4Q86UU9 113 aa9.28□□□□□ -0.92
DDX39B-216ENST00000462421 IRF2BP1Q8IU81 584 aa9.28□□□□□ -0.92
DDX39B-216ENST00000462421 RGL4Q8IZJ4 473 aa9.28□□□□□ -0.92
DDX39B-216ENST00000462421 LGI2Q8N0V4 545 aa9.28□□□□□ -0.92
DDX39B-216ENST00000462421 DEFB106AQ8N104 65 aa9.28□□□□□ -0.92
DDX39B-216ENST00000462421 SUMF1Q8NBK3 374 aa9.28□□□□□ -0.92
DDX39B-216ENST00000462421 MDGA1Q8NFP4 955 aa9.28□□□□□ -0.92
DDX39B-216ENST00000462421 NETO1Q8TDF5 533 aa9.28□□□□□ -0.92
DDX39B-216ENST00000462421 CLEC4CQ8WTT0 213 aa9.28□□□□□ -0.92
DDX39B-216ENST00000462421 FOXJ1Q92949 421 aa9.28□□□□□ -0.92
DDX39B-216ENST00000462421 RPRD1AQ96P16 312 aaPredicted RBP9.28□□□□□ -0.92
DDX39B-216ENST00000462421 BPIFA3Q9BQP9 254 aa9.28□□□□□ -0.92
DDX39B-216ENST00000462421 SELENOOQ9BVL4 669 aa9.28□□□□□ -0.92
DDX39B-216ENST00000462421 ARRDC1-AS1Q9H2J1 176 aa9.28□□□□□ -0.92
DDX39B-216ENST00000462421 WDCPQ9H6R7 721 aa9.28□□□□□ -0.92
DDX39B-216ENST00000462421 SEMA4GQ9NTN9 838 aa9.28□□□□□ -0.92
DDX39B-216ENST00000462421 ABCB8Q9NUT2 735 aa9.28□□□□□ -0.92
DDX39B-216ENST00000462421 ELOVL2Q9NXB9 296 aa9.28□□□□□ -0.92
DDX39B-216ENST00000462421 SUSD2Q9UGT4 822 aa9.28□□□□□ -0.92
DDX39B-216ENST00000462421 LIMA1Q9UHB6 759 aaKnown RBP9.28□□□□□ -0.92
DDX39B-216ENST00000462421 STON1Q9Y6Q2 735 aa9.28□□□□□ -0.92
DDX39B-216ENST00000462421 MYH10P35580 1976 aa9.28□□□□□ -0.92
DDX39B-216ENST00000462421 TRIOO75962 3097 aa9.28□□□□□ -0.92
DDX39B-216ENST00000462421 KCNU1A8MYU2 1149 aa9.27□□□□□ -0.93
DDX39B-216ENST00000462421 PAPSS1O43252 624 aaPredicted RBP9.27□□□□□ -0.93
DDX39B-216ENST00000462421 EPN2O95208 641 aa9.27□□□□□ -0.93
DDX39B-216ENST00000462421 LUC7L3O95232 432 aaKnown RBP9.27□□□□□ -0.93
DDX39B-216ENST00000462421 KLKB1P03952 638 aa9.27□□□□□ -0.93
DDX39B-216ENST00000462421 DNTTP04053 509 aa9.27□□□□□ -0.93
DDX39B-216ENST00000462421 TDGF1P13385 188 aa9.27□□□□□ -0.93
DDX39B-216ENST00000462421 HNRNPLP14866 589 aaKnown RBP eCLIP9.27□□□□□ -0.93
DDX39B-216ENST00000462421 ZNF18P17022 549 aa9.27□□□□□ -0.93
DDX39B-216ENST00000462421 TACR2P21452 398 aa9.27□□□□□ -0.93
DDX39B-216ENST00000462421 SDC4P31431 198 aa9.27□□□□□ -0.93
DDX39B-216ENST00000462421 SCNN1AP37088 669 aa9.27□□□□□ -0.93
DDX39B-216ENST00000462421 MATKP42679 507 aa9.27□□□□□ -0.93
DDX39B-216ENST00000462421 KIR2DL1P43626 348 aaPredicted RBP9.27□□□□□ -0.93
DDX39B-216ENST00000462421 KRT83P78385 493 aa9.27□□□□□ -0.93
DDX39B-216ENST00000462421 FOXK2Q01167 660 aa9.27□□□□□ -0.93
DDX39B-216ENST00000462421 CDR2Q01850 454 aa9.27□□□□□ -0.93
DDX39B-216ENST00000462421 DMWDQ09019 674 aa9.27□□□□□ -0.93
DDX39B-216ENST00000462421 CCDC15Q0P6D6 951 aa9.27□□□□□ -0.93
DDX39B-216ENST00000462421 LMAN2Q12907 356 aa9.27□□□□□ -0.93
DDX39B-216ENST00000462421 SRSF5Q13243 272 aaKnown RBP9.27□□□□□ -0.93
DDX39B-216ENST00000462421 SLC12A1Q13621 1099 aa9.27□□□□□ -0.93
DDX39B-216ENST00000462421 TSR1Q2NL82 804 aaKnown RBP9.27□□□□□ -0.93
DDX39B-216ENST00000462421 KLHL40Q2TBA0 621 aa9.27□□□□□ -0.93
DDX39B-216ENST00000462421 ZC3H12AQ5D1E8 599 aaKnown RBP9.27□□□□□ -0.93
DDX39B-216ENST00000462421 BRMS1LQ5PSV4 323 aa9.27□□□□□ -0.93
DDX39B-216ENST00000462421 EMC10Q5UCC4 262 aa9.27□□□□□ -0.93
DDX39B-216ENST00000462421 DAB2IPQ5VWQ8 1189 aa9.27□□□□□ -0.93
DDX39B-216ENST00000462421 RAP1GAP2Q684P5 730 aa9.27□□□□□ -0.93
DDX39B-216ENST00000462421 RFWD3Q6PCD5 774 aa9.27□□□□□ -0.93
DDX39B-216ENST00000462421 FAM183BPQ6ZVS7 135 aa9.27□□□□□ -0.93
DDX39B-216ENST00000462421 SLC26A9Q7LBE3 791 aa9.27□□□□□ -0.93
DDX39B-216ENST00000462421 DSG4Q86SJ6 1040 aa9.27□□□□□ -0.93
DDX39B-216ENST00000462421 KBTBD6Q86V97 674 aa9.27□□□□□ -0.93
DDX39B-216ENST00000462421 CEP76Q8TAP6 659 aa9.27□□□□□ -0.93
DDX39B-216ENST00000462421 PIGKQ92643 395 aa9.27□□□□□ -0.93
DDX39B-216ENST00000462421 SIPA1Q96FS4 1042 aa9.27□□□□□ -0.93
DDX39B-216ENST00000462421 CPXM1Q96SM3 734 aa9.27□□□□□ -0.93
DDX39B-216ENST00000462421 RTKNQ9BST9 563 aa9.27□□□□□ -0.93
DDX39B-216ENST00000462421 MUC3BQ9H195 1237 aa9.27□□□□□ -0.93
DDX39B-216ENST00000462421 PRDM16Q9HAZ2 1276 aa9.27□□□□□ -0.93
DDX39B-216ENST00000462421 CALCOCO1Q9P1Z2 691 aa9.27□□□□□ -0.93
DDX39B-216ENST00000462421 INVSQ9Y283 1065 aa9.27□□□□□ -0.93
DDX39B-216ENST00000462421 HELZP42694 1942 aaKnown RBP9.27□□□□□ -0.93
DDX39B-216ENST00000462421 COL4A3Q01955 1670 aa9.26□□□□□ -0.93
DDX39B-216ENST00000462421 OBSL1O75147 1896 aa9.26□□□□□ -0.93
DDX39B-216ENST00000462421 COL4A2P08572 1712 aa9.26□□□□□ -0.93
DDX39B-216ENST00000462421 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.26□□□□□ -0.93
DDX39B-216ENST00000462421 A0A1B0GVM2 712 aa9.26□□□□□ -0.93
DDX39B-216ENST00000462421 TCAF2A6NFQ2 919 aa9.26□□□□□ -0.93
DDX39B-216ENST00000462421 CFIP05156 583 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms