RNA–Protein interactions for RNA: ENST00000462030.5

HPS3-204, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-204ENST00000462030 FBXW8Q8N3Y1 598 aa18.98■□□□□ 0.63
HPS3-204ENST00000462030 ACMSDQ8TDX5 336 aa18.98■□□□□ 0.63
HPS3-204ENST00000462030 TRAPPC12Q8WVT3 735 aa18.98■□□□□ 0.63
HPS3-204ENST00000462030 CMTM5Q96DZ9 223 aa18.98■□□□□ 0.63
HPS3-204ENST00000462030 CLMNQ96JQ2 1002 aa18.98■□□□□ 0.63
HPS3-204ENST00000462030 GCNAQ96QF7 691 aa18.98■□□□□ 0.63
HPS3-204ENST00000462030 ZNF670Q9BS34 389 aa18.98■□□□□ 0.63
HPS3-204ENST00000462030 RNPEPQ9H4A4 650 aa18.98■□□□□ 0.63
HPS3-204ENST00000462030 MINDY3Q9H8M7 445 aa18.98■□□□□ 0.63
HPS3-204ENST00000462030 ACKR2O00590 384 aa18.98■□□□□ 0.63
HPS3-204ENST00000462030 ZBTB14O43829 449 aa18.98■□□□□ 0.63
HPS3-204ENST00000462030 CSDE1O75534 798 aaKnown RBP18.98■□□□□ 0.63
HPS3-204ENST00000462030 ATXN1P54253 815 aaKnown RBP18.98■□□□□ 0.63
HPS3-204ENST00000462030 MXD4Q14582 209 aaPredicted RBP18.98■□□□□ 0.63
HPS3-204ENST00000462030 ANKRD20A4Q4UJ75 823 aa18.98■□□□□ 0.63
HPS3-204ENST00000462030 STEAP4Q687X5 459 aa18.98■□□□□ 0.63
HPS3-204ENST00000462030 KCNT2Q6UVM3 1135 aa18.98■□□□□ 0.63
HPS3-204ENST00000462030 NIM1KQ8IY84 436 aa18.98■□□□□ 0.63
HPS3-204ENST00000462030 DRAXINQ8NBI3 349 aaPredicted RBP18.98■□□□□ 0.63
HPS3-204ENST00000462030 IFT122Q9HBG6 1241 aa18.98■□□□□ 0.63
HPS3-204ENST00000462030 MAN1C1Q9NR34 630 aa18.98■□□□□ 0.63
HPS3-204ENST00000462030 MFHAS1Q9Y4C4 1052 aa18.98■□□□□ 0.63
HPS3-204ENST00000462030 C15orf38-AP3S2A0A0A6YYH1 394 aa18.97■□□□□ 0.63
HPS3-204ENST00000462030 CAPN8A6NHC0 703 aa18.97■□□□□ 0.63
HPS3-204ENST00000462030 ZBTB42B2RXF5 422 aa18.97■□□□□ 0.63
HPS3-204ENST00000462030 GPR25O00155 361 aa18.97■□□□□ 0.63
HPS3-204ENST00000462030 ALDH1A2O94788 518 aa18.97■□□□□ 0.63
HPS3-204ENST00000462030 CD1EP15812 388 aa18.97■□□□□ 0.63
HPS3-204ENST00000462030 ALOX15P16050 662 aaPredicted RBP18.97■□□□□ 0.63
HPS3-204ENST00000462030 SDC4P31431 198 aa18.97■□□□□ 0.63
HPS3-204ENST00000462030 CHN2P52757 468 aa18.97■□□□□ 0.63
HPS3-204ENST00000462030 HDAC4P56524 1084 aa18.97■□□□□ 0.63
HPS3-204ENST00000462030 ABCE1P61221 599 aaKnown RBP18.97■□□□□ 0.63
HPS3-204ENST00000462030 FOLH1Q04609 750 aa18.97■□□□□ 0.63
HPS3-204ENST00000462030 SEMA5AQ13591 1074 aa18.97■□□□□ 0.63
HPS3-204ENST00000462030 ITGA9Q13797 1035 aa18.97■□□□□ 0.63
HPS3-204ENST00000462030 STILQ15468 1287 aa18.97■□□□□ 0.63
HPS3-204ENST00000462030 OLFML1Q6UWY5 402 aa18.97■□□□□ 0.63
HPS3-204ENST00000462030 ARPINQ7Z6K5 226 aa18.97■□□□□ 0.63
HPS3-204ENST00000462030 SPATA24Q86W54 205 aa18.97■□□□□ 0.63
HPS3-204ENST00000462030 KHSRPQ92945 711 aaKnown RBP eCLIP18.97■□□□□ 0.63
HPS3-204ENST00000462030 CLIC5Q9NZA1 410 aa18.97■□□□□ 0.63
HPS3-204ENST00000462030 COPG2Q9UBF2 871 aa18.97■□□□□ 0.63
HPS3-204ENST00000462030 INPP5FQ9Y2H2 1132 aa18.97■□□□□ 0.63
HPS3-204ENST00000462030 PTPRFP10586 1907 aa18.97■□□□□ 0.63
HPS3-204ENST00000462030 DPYSL4O14531 572 aa18.97■□□□□ 0.63
HPS3-204ENST00000462030 CASQ2O14958 399 aaPredicted RBP18.97■□□□□ 0.63
HPS3-204ENST00000462030 ITGA2BP08514 1039 aa18.97■□□□□ 0.63
HPS3-204ENST00000462030 SMIM18P0DKX4 95 aa18.97■□□□□ 0.63
HPS3-204ENST00000462030 VAV1P15498 845 aa18.97■□□□□ 0.63
HPS3-204ENST00000462030 PTPRAP18433 802 aa18.97■□□□□ 0.63
HPS3-204ENST00000462030 SESN2P58004 480 aaPredicted RBP18.97■□□□□ 0.63
HPS3-204ENST00000462030 USP4Q13107 963 aa18.97■□□□□ 0.63
HPS3-204ENST00000462030 PMF1Q6P1K2 205 aa18.97■□□□□ 0.63
HPS3-204ENST00000462030 EEPD1Q7L9B9 569 aa18.97■□□□□ 0.63
HPS3-204ENST00000462030 KBTBD6Q86V97 674 aa18.97■□□□□ 0.63
HPS3-204ENST00000462030 ATP2A3Q93084 1043 aa18.97■□□□□ 0.63
HPS3-204ENST00000462030 OPTNQ96CV9 577 aa18.97■□□□□ 0.63
HPS3-204ENST00000462030 NMD3Q96D46 503 aaKnown RBP18.97■□□□□ 0.63
HPS3-204ENST00000462030 E9PBE3 544 aa18.96■□□□□ 0.63
HPS3-204ENST00000462030 KLHL41O60662 606 aa18.96■□□□□ 0.63
HPS3-204ENST00000462030 IL18RAPO95256 599 aa18.96■□□□□ 0.63
HPS3-204ENST00000462030 IQCF3P0C7M6 154 aa18.96■□□□□ 0.63
HPS3-204ENST00000462030 RALBP11234 206 aa18.96■□□□□ 0.63
HPS3-204ENST00000462030 COX4I1P13073 169 aa18.96■□□□□ 0.63
HPS3-204ENST00000462030 DEUP1Q05D60 604 aa18.96■□□□□ 0.63
HPS3-204ENST00000462030 TNFAIP1Q13829 316 aa18.96■□□□□ 0.63
HPS3-204ENST00000462030 GOLGA7BQ2TAP0 167 aa18.96■□□□□ 0.63
HPS3-204ENST00000462030 LCLAT1Q6UWP7 414 aa18.96■□□□□ 0.63
HPS3-204ENST00000462030 C4orf22Q6V702 233 aa18.96■□□□□ 0.63
HPS3-204ENST00000462030 SDCCAG8Q86SQ7 713 aaPredicted RBP18.96■□□□□ 0.63
HPS3-204ENST00000462030 ICA1LQ8NDH6 482 aa18.96■□□□□ 0.63
HPS3-204ENST00000462030 GCOM2Q9BZD3 368 aaPredicted RBP18.96■□□□□ 0.63
HPS3-204ENST00000462030 C2orf40Q9H1Z8 148 aa18.96■□□□□ 0.63
HPS3-204ENST00000462030 FZD8Q9H461 694 aa18.96■□□□□ 0.63
HPS3-204ENST00000462030 DHX35Q9H5Z1 703 aaKnown RBP18.96■□□□□ 0.63
HPS3-204ENST00000462030 DCDC2Q9UHG0 476 aa18.96■□□□□ 0.63
HPS3-204ENST00000462030 SSC5DA1L4H1 1573 aa18.96■□□□□ 0.63
HPS3-204ENST00000462030 MDM4O15151 490 aa18.96■□□□□ 0.63
HPS3-204ENST00000462030 GRK2P25098 689 aa18.96■□□□□ 0.63
HPS3-204ENST00000462030 MGAT1P26572 445 aa18.96■□□□□ 0.63
HPS3-204ENST00000462030 MTTPP55157 894 aa18.96■□□□□ 0.63
HPS3-204ENST00000462030 TLR1Q15399 786 aa18.96■□□□□ 0.63
HPS3-204ENST00000462030 MAP3K21Q5TCX8 1036 aa18.96■□□□□ 0.63
HPS3-204ENST00000462030 BSPRYQ5W0U4 402 aa18.96■□□□□ 0.63
HPS3-204ENST00000462030 AEBP2Q6ZN18 517 aaPredicted RBP18.96■□□□□ 0.63
HPS3-204ENST00000462030 TMC7Q7Z402 723 aa18.96■□□□□ 0.63
HPS3-204ENST00000462030 SCUBE3Q8IX30 993 aa18.96■□□□□ 0.63
HPS3-204ENST00000462030 NETO2Q8NC67 525 aa18.96■□□□□ 0.63
HPS3-204ENST00000462030 HPDLQ96IR7 371 aa18.96■□□□□ 0.63
HPS3-204ENST00000462030 PGLYRP2Q96PD5 576 aa18.96■□□□□ 0.63
HPS3-204ENST00000462030 QKIQ96PU8 341 aaKnown RBP eCLIP18.96■□□□□ 0.63
HPS3-204ENST00000462030 TBCBQ99426 244 aa18.96■□□□□ 0.63
HPS3-204ENST00000462030 DTNAQ9Y4J8 743 aa18.96■□□□□ 0.63
HPS3-204ENST00000462030 SPDYE16A6NNV3 312 aaPredicted RBP18.95■□□□□ 0.62
HPS3-204ENST00000462030 F7P08709 466 aaPredicted RBP18.95■□□□□ 0.62
HPS3-204ENST00000462030 MYL4P12829 197 aa18.95■□□□□ 0.62
HPS3-204ENST00000462030 HARS2P49590 506 aaKnown RBP18.95■□□□□ 0.62
HPS3-204ENST00000462030 SNAPC2Q13487 334 aa18.95■□□□□ 0.62
HPS3-204ENST00000462030 LY6KQ17RY6 165 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms