RNA–Protein interactions for RNA: ENST00000461874.1

VARS-220, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-220ENST00000461874 ABCB8Q9NUT2 735 aa19.7■□□□□ 0.74
VARS-220ENST00000461874 TLR6Q9Y2C9 796 aa19.7■□□□□ 0.74
VARS-220ENST00000461874 E5RJQ4 531 aa19.69■□□□□ 0.74
VARS-220ENST00000461874 KCNA4P22459 653 aa19.69■□□□□ 0.74
VARS-220ENST00000461874 ARID5AQ03989 594 aa19.69■□□□□ 0.74
VARS-220ENST00000461874 LMAN2Q12907 356 aa19.69■□□□□ 0.74
VARS-220ENST00000461874 MAN2A1Q16706 1144 aa19.69■□□□□ 0.74
VARS-220ENST00000461874 DPCR1Q3MIW9 517 aa19.69■□□□□ 0.74
VARS-220ENST00000461874 DAB2IPQ5VWQ8 1189 aa19.69■□□□□ 0.74
VARS-220ENST00000461874 SYPL2Q5VXT5 272 aa19.69■□□□□ 0.74
VARS-220ENST00000461874 NADSYN1Q6IA69 706 aa19.69■□□□□ 0.74
VARS-220ENST00000461874 SLC23A3Q6PIS1 610 aa19.69■□□□□ 0.74
VARS-220ENST00000461874 CHST9Q7L1S5 443 aa19.69■□□□□ 0.74
VARS-220ENST00000461874 ADIPOR2Q86V24 386 aa19.69■□□□□ 0.74
VARS-220ENST00000461874 TMPRSS6Q8IU80 811 aa19.69■□□□□ 0.74
VARS-220ENST00000461874 SLC41A1Q8IVJ1 513 aa19.69■□□□□ 0.74
VARS-220ENST00000461874 SLC39A13Q96H72 371 aa19.69■□□□□ 0.74
VARS-220ENST00000461874 ZNF419Q96HQ0 510 aaPredicted RBP19.69■□□□□ 0.74
VARS-220ENST00000461874 TRIM62Q9BVG3 475 aa19.69■□□□□ 0.74
VARS-220ENST00000461874 NUSAP1Q9BXS6 441 aaKnown RBP19.69■□□□□ 0.74
VARS-220ENST00000461874 SIX2Q9NPC8 291 aa19.69■□□□□ 0.74
VARS-220ENST00000461874 ITM2CQ9NQX7 267 aa19.69■□□□□ 0.74
VARS-220ENST00000461874 GGA2Q9UJY4 613 aa19.69■□□□□ 0.74
VARS-220ENST00000461874 ACACBO00763 2458 aa19.69■□□□□ 0.74
VARS-220ENST00000461874 ATXN2Q99700 1313 aaKnown RBP19.69■□□□□ 0.74
VARS-220ENST00000461874 TBL1XO60907 577 aa19.68■□□□□ 0.74
VARS-220ENST00000461874 NDUFS2O75306 463 aa19.68■□□□□ 0.74
VARS-220ENST00000461874 EPHX1P07099 455 aa19.68■□□□□ 0.74
VARS-220ENST00000461874 PABPC1P11940 636 aaKnown RBP19.68■□□□□ 0.74
VARS-220ENST00000461874 ERCC5P28715 1186 aaPredicted RBP19.68■□□□□ 0.74
VARS-220ENST00000461874 CD6P30203 668 aa19.68■□□□□ 0.74
VARS-220ENST00000461874 PDCLQ13371 301 aa19.68■□□□□ 0.74
VARS-220ENST00000461874 DUOXA1Q1HG43 343 aa19.68■□□□□ 0.74
VARS-220ENST00000461874 SERPINA13PQ6UXR4 307 aa19.68■□□□□ 0.74
VARS-220ENST00000461874 TAC4Q86UU9 113 aa19.68■□□□□ 0.74
VARS-220ENST00000461874 FAM114A1Q8IWE2 563 aa19.68■□□□□ 0.74
VARS-220ENST00000461874 AHI1Q8N157 1196 aa19.68■□□□□ 0.74
VARS-220ENST00000461874 WDTC1Q8N5D0 677 aa19.68■□□□□ 0.74
VARS-220ENST00000461874 CEP76Q8TAP6 659 aa19.68■□□□□ 0.74
VARS-220ENST00000461874 ADAM32Q8TC27 787 aa19.68■□□□□ 0.74
VARS-220ENST00000461874 WFDC5Q8TCV5 224 aa19.68■□□□□ 0.74
VARS-220ENST00000461874 DDX50Q9BQ39 737 aaKnown RBP19.68■□□□□ 0.74
VARS-220ENST00000461874 USP36Q9P275 1121 aaKnown RBP19.68■□□□□ 0.74
VARS-220ENST00000461874 PLA2G4CQ9UP65 541 aa19.68■□□□□ 0.74
VARS-220ENST00000461874 CAPN9O14815 690 aa19.67■□□□□ 0.74
VARS-220ENST00000461874 KCNK5O95279 499 aa19.67■□□□□ 0.74
VARS-220ENST00000461874 COPAP53621 1224 aa19.67■□□□□ 0.74
VARS-220ENST00000461874 YWHAZP63104 245 aaKnown RBP19.67■□□□□ 0.74
VARS-220ENST00000461874 N4BP2L1Q5TBK1 243 aaPredicted RBP19.67■□□□□ 0.74
VARS-220ENST00000461874 MBLAC2Q68D91 279 aa19.67■□□□□ 0.74
VARS-220ENST00000461874 CLEC17AQ6ZS10 378 aa19.67■□□□□ 0.74
VARS-220ENST00000461874 ZNF557Q8N988 423 aaPredicted RBP19.67■□□□□ 0.74
VARS-220ENST00000461874 HJURPQ8NCD3 748 aaPredicted RBP19.67■□□□□ 0.74
VARS-220ENST00000461874 CYB5D2Q8WUJ1 264 aa19.67■□□□□ 0.74
VARS-220ENST00000461874 SIPA1Q96FS4 1042 aa19.67■□□□□ 0.74
VARS-220ENST00000461874 HSPA12BQ96MM6 686 aa19.67■□□□□ 0.74
VARS-220ENST00000461874 PRICKLE1Q96MT3 831 aaPredicted RBP19.67■□□□□ 0.74
VARS-220ENST00000461874 NUP62CLQ9H1M0 184 aa19.67■□□□□ 0.74
VARS-220ENST00000461874 TMEM245Q9H330 911 aa19.67■□□□□ 0.74
VARS-220ENST00000461874 POPDC2Q9HBU9 364 aa19.67■□□□□ 0.74
VARS-220ENST00000461874 DACH1Q9UI36 760 aa19.67■□□□□ 0.74
VARS-220ENST00000461874 DNAJC12Q9UKB3 198 aa19.67■□□□□ 0.74
VARS-220ENST00000461874 AJAP1Q9UKB5 411 aaPredicted RBP19.67■□□□□ 0.74
VARS-220ENST00000461874 PCDHGC3Q9UN70 934 aa19.67■□□□□ 0.74
VARS-220ENST00000461874 SLC6A14Q9UN76 642 aa19.67■□□□□ 0.74
VARS-220ENST00000461874 PI4KAP42356 2102 aa19.66■□□□□ 0.74
VARS-220ENST00000461874 CFIP05156 583 aa19.66■□□□□ 0.74
VARS-220ENST00000461874 SERPINF2P08697 491 aa19.66■□□□□ 0.74
VARS-220ENST00000461874 HLA-EP13747 358 aa19.66■□□□□ 0.74
VARS-220ENST00000461874 ENGP17813 658 aa19.66■□□□□ 0.74
VARS-220ENST00000461874 CD70P32970 193 aa19.66■□□□□ 0.74
VARS-220ENST00000461874 TPMTP51580 245 aa19.66■□□□□ 0.74
VARS-220ENST00000461874 PTK2Q05397 1052 aa19.66■□□□□ 0.74
VARS-220ENST00000461874 CAMK2GQ13555 558 aaPredicted RBP19.66■□□□□ 0.74
VARS-220ENST00000461874 TAF5Q15542 800 aa19.66■□□□□ 0.74
VARS-220ENST00000461874 PTPRNQ16849 979 aa19.66■□□□□ 0.74
VARS-220ENST00000461874 VWA3BQ502W6 1294 aa19.66■□□□□ 0.74
VARS-220ENST00000461874 FNDC3BQ53EP0 1204 aaKnown RBP19.66■□□□□ 0.74
VARS-220ENST00000461874 RABEPKQ7Z6M1 372 aa19.66■□□□□ 0.74
VARS-220ENST00000461874 FIBINQ8TAL6 211 aa19.66■□□□□ 0.74
VARS-220ENST00000461874 PRCCQ92733 491 aaPredicted RBP19.66■□□□□ 0.74
VARS-220ENST00000461874 FOXJ1Q92949 421 aa19.66■□□□□ 0.74
VARS-220ENST00000461874 MYEOVQ96EZ4 313 aa19.66■□□□□ 0.74
VARS-220ENST00000461874 TOE1Q96GM8 510 aaKnown RBP19.66■□□□□ 0.74
VARS-220ENST00000461874 LMLNQ96KR4 655 aa19.66■□□□□ 0.74
VARS-220ENST00000461874 CPXM1Q96SM3 734 aa19.66■□□□□ 0.74
VARS-220ENST00000461874 NUCKS1Q9H1E3 243 aaKnown RBP19.66■□□□□ 0.74
VARS-220ENST00000461874 LHX5Q9H2C1 402 aa19.66■□□□□ 0.74
VARS-220ENST00000461874 NDST4Q9H3R1 872 aa19.66■□□□□ 0.74
VARS-220ENST00000461874 WSB2Q9NYS7 404 aaPredicted RBP19.66■□□□□ 0.74
VARS-220ENST00000461874 STIM2Q9P246 746 aa19.66■□□□□ 0.74
VARS-220ENST00000461874 TJP2Q9UDY2 1190 aa19.66■□□□□ 0.74
VARS-220ENST00000461874 TNRC6BQ9UPQ9 1833 aaKnown RBP19.65■□□□□ 0.74
VARS-220ENST00000461874 KCNJ18B7U540 433 aa19.65■□□□□ 0.74
VARS-220ENST00000461874 FOXN3O00409 490 aaPredicted RBP19.65■□□□□ 0.74
VARS-220ENST00000461874 TRUB2O95900 331 aaKnown RBP19.65■□□□□ 0.74
VARS-220ENST00000461874 MOCS2O96007 188 aaPredicted RBP19.65■□□□□ 0.74
VARS-220ENST00000461874 IGLV3-19P01714 112 aa19.65■□□□□ 0.74
VARS-220ENST00000461874 IGLV3-25P01717 112 aa19.65■□□□□ 0.74
VARS-220ENST00000461874 ATP5BP06576 529 aaKnown RBP19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms