RNA–Protein interactions for RNA: ENST00000461377.5

CCM2-203, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,983 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-203ENST00000461377 ANKS4BQ8N8V4 417 aa20.86■□□□□ 0.93
CCM2-203ENST00000461377 SLC43A3Q8NBI5 491 aa20.86■□□□□ 0.93
CCM2-203ENST00000461377 P2RY11Q96G91 374 aa20.86■□□□□ 0.93
CCM2-203ENST00000461377 SIGLEC10Q96LC7 697 aa20.86■□□□□ 0.93
CCM2-203ENST00000461377 PRDM12Q9H4Q4 367 aa20.86■□□□□ 0.93
CCM2-203ENST00000461377 RAD54BQ9Y620 910 aa20.86■□□□□ 0.93
CCM2-203ENST00000461377 FRMPD3Q5JV73 1810 aa20.86■□□□□ 0.93
CCM2-203ENST00000461377 RNF103O00237 685 aa20.86■□□□□ 0.93
CCM2-203ENST00000461377 TRDMT1O14717 391 aaKnown RBP20.86■□□□□ 0.93
CCM2-203ENST00000461377 B4GALT3O60512 393 aa20.86■□□□□ 0.93
CCM2-203ENST00000461377 ERCC2P18074 760 aa20.86■□□□□ 0.93
CCM2-203ENST00000461377 KRT4P19013 534 aa20.86■□□□□ 0.93
CCM2-203ENST00000461377 TAC1P20366 129 aa20.86■□□□□ 0.93
CCM2-203ENST00000461377 TPI1P60174 286 aa20.86■□□□□ 0.93
CCM2-203ENST00000461377 TSPY1Q01534 308 aa20.86■□□□□ 0.93
CCM2-203ENST00000461377 AP1B1Q10567 949 aa20.86■□□□□ 0.93
CCM2-203ENST00000461377 BSPRYQ5W0U4 402 aa20.86■□□□□ 0.93
CCM2-203ENST00000461377 GLB1LQ6UWU2 654 aa20.86■□□□□ 0.93
CCM2-203ENST00000461377 SLC24A5Q71RS6 500 aa20.86■□□□□ 0.93
CCM2-203ENST00000461377 PRPF39Q86UA1 669 aaKnown RBP20.86■□□□□ 0.93
CCM2-203ENST00000461377 COLGALT1Q8NBJ5 622 aa20.86■□□□□ 0.93
CCM2-203ENST00000461377 NETO2Q8NC67 525 aa20.86■□□□□ 0.93
CCM2-203ENST00000461377 PXYLP1Q8TE99 480 aa20.86■□□□□ 0.93
CCM2-203ENST00000461377 FERMT1Q9BQL6 677 aa20.86■□□□□ 0.93
CCM2-203ENST00000461377 IQANK1A0A1B0GTG1 560 aa20.85■□□□□ 0.93
CCM2-203ENST00000461377 ZNF189O75820 626 aaPredicted RBP20.85■□□□□ 0.93
CCM2-203ENST00000461377 CPP00450 1065 aa20.85■□□□□ 0.93
CCM2-203ENST00000461377 CA4P22748 312 aa20.85■□□□□ 0.93
CCM2-203ENST00000461377 PRKCHP24723 683 aa20.85■□□□□ 0.93
CCM2-203ENST00000461377 FAM189BP81408 668 aa20.85■□□□□ 0.93
CCM2-203ENST00000461377 CDK16Q00536 496 aa20.85■□□□□ 0.93
CCM2-203ENST00000461377 DSC1Q08554 894 aa20.85■□□□□ 0.93
CCM2-203ENST00000461377 BEND5Q7L4P6 421 aa20.85■□□□□ 0.93
CCM2-203ENST00000461377 TAC4Q86UU9 113 aa20.85■□□□□ 0.93
CCM2-203ENST00000461377 RAET1EQ8TD07 263 aa20.85■□□□□ 0.93
CCM2-203ENST00000461377 EIF2B3Q9NR50 452 aaKnown RBP20.85■□□□□ 0.93
CCM2-203ENST00000461377 ZNF135P52742 658 aaPredicted RBP20.85■□□□□ 0.93
CCM2-203ENST00000461377 WASHC5Q12768 1159 aa20.85■□□□□ 0.93
CCM2-203ENST00000461377 SLC1A5Q15758 541 aa20.85■□□□□ 0.93
CCM2-203ENST00000461377 CLLU1OSQ5K130 101 aa20.85■□□□□ 0.93
CCM2-203ENST00000461377 PDZD4Q76G19 769 aaPredicted RBP20.85■□□□□ 0.93
CCM2-203ENST00000461377 ZNF280BQ86YH2 543 aa20.85■□□□□ 0.93
CCM2-203ENST00000461377 CCT6BQ92526 530 aa20.85■□□□□ 0.93
CCM2-203ENST00000461377 ALKBH8Q96BT7 664 aaKnown RBP20.85■□□□□ 0.93
CCM2-203ENST00000461377 EBNA1BP2Q99848 306 aaKnown RBP20.85■□□□□ 0.93
CCM2-203ENST00000461377 WDCPQ9H6R7 721 aa20.85■□□□□ 0.93
CCM2-203ENST00000461377 A0A1W2PQ45 241 aaPredicted RBP20.84■□□□□ 0.93
CCM2-203ENST00000461377 A0A1W2PQY0 241 aa20.84■□□□□ 0.93
CCM2-203ENST00000461377 DDHD2O94830 711 aa20.84■□□□□ 0.93
CCM2-203ENST00000461377 ZWINTO95229 277 aa20.84■□□□□ 0.93
CCM2-203ENST00000461377 INHBAP08476 426 aa20.84■□□□□ 0.93
CCM2-203ENST00000461377 MLNP12872 115 aa20.84■□□□□ 0.93
CCM2-203ENST00000461377 GBP2P32456 591 aaPredicted RBP20.84■□□□□ 0.93
CCM2-203ENST00000461377 GRIA1P42261 906 aa20.84■□□□□ 0.93
CCM2-203ENST00000461377 LIG3P49916 1009 aa20.84■□□□□ 0.93
CCM2-203ENST00000461377 SARNPP82979 210 aaKnown RBP20.84■□□□□ 0.93
CCM2-203ENST00000461377 LHX8Q68G74 356 aa20.84■□□□□ 0.93
CCM2-203ENST00000461377 UNC5AQ6ZN44 842 aa20.84■□□□□ 0.93
CCM2-203ENST00000461377 RGS9BPQ6ZS82 235 aa20.84■□□□□ 0.93
CCM2-203ENST00000461377 TP53INP2Q8IXH6 220 aa20.84■□□□□ 0.93
CCM2-203ENST00000461377 CCNYQ8ND76 341 aa20.84■□□□□ 0.93
CCM2-203ENST00000461377 DQX1Q8TE96 717 aaKnown RBP20.84■□□□□ 0.93
CCM2-203ENST00000461377 PAIP2Q9BPZ3 127 aaKnown RBP20.84■□□□□ 0.93
CCM2-203ENST00000461377 TRIM62Q9BVG3 475 aa20.84■□□□□ 0.93
CCM2-203ENST00000461377 IKBKGQ9Y6K9 419 aa20.84■□□□□ 0.93
CCM2-203ENST00000461377 TMEM189-UBE2V1I3L0A0 370 aa20.83■□□□□ 0.93
CCM2-203ENST00000461377 APOEP02649 317 aa20.83■□□□□ 0.93
CCM2-203ENST00000461377 YWHAHQ04917 246 aaPredicted RBP20.83■□□□□ 0.93
CCM2-203ENST00000461377 FAAP100Q0VG06 881 aa20.83■□□□□ 0.93
CCM2-203ENST00000461377 PARP6Q2NL67 630 aa20.83■□□□□ 0.93
CCM2-203ENST00000461377 DEFB115Q30KQ5 88 aa20.83■□□□□ 0.93
CCM2-203ENST00000461377 LACTB2Q53H82 288 aaPredicted RBP20.83■□□□□ 0.93
CCM2-203ENST00000461377 NOMO2Q5JPE7 1267 aa20.83■□□□□ 0.93
CCM2-203ENST00000461377 C4orf50Q6ZRC1 276 aa20.83■□□□□ 0.93
CCM2-203ENST00000461377 SLC26A11Q86WA9 606 aa20.83■□□□□ 0.93
CCM2-203ENST00000461377 SPATA2LQ8IUW3 424 aaPredicted RBP20.83■□□□□ 0.93
CCM2-203ENST00000461377 MPP5Q8N3R9 675 aa20.83■□□□□ 0.93
CCM2-203ENST00000461377 BANPQ8N9N5 519 aa20.83■□□□□ 0.93
CCM2-203ENST00000461377 TKTL2Q9H0I9 626 aa20.83■□□□□ 0.93
CCM2-203ENST00000461377 KDM4CQ9H3R0 1056 aa20.83■□□□□ 0.93
CCM2-203ENST00000461377 ZNF180Q9UJW8 692 aa20.83■□□□□ 0.93
CCM2-203ENST00000461377 GRID1Q9ULK0 1009 aa20.83■□□□□ 0.93
CCM2-203ENST00000461377 USP15Q9Y4E8 981 aaPredicted RBP20.83■□□□□ 0.93
CCM2-203ENST00000461377 DNAH12Q6ZR08 3092 aa20.83■□□□□ 0.93
CCM2-203ENST00000461377 CCT8L1PA6NM43 557 aa20.83■□□□□ 0.92
CCM2-203ENST00000461377 FSBPO95073 299 aa20.83■□□□□ 0.92
CCM2-203ENST00000461377 IGLV3-25P01717 112 aa20.83■□□□□ 0.92
CCM2-203ENST00000461377 ZKSCAN8Q15776 578 aaPredicted RBP20.83■□□□□ 0.92
CCM2-203ENST00000461377 ZNF567Q8N184 647 aa20.83■□□□□ 0.92
CCM2-203ENST00000461377 URGCPQ8TCY9 931 aa20.83■□□□□ 0.92
CCM2-203ENST00000461377 EPAS1Q99814 870 aa20.83■□□□□ 0.92
CCM2-203ENST00000461377 SEPT10Q9P0V9 454 aa20.83■□□□□ 0.92
CCM2-203ENST00000461377 IGSF9Q9P2J2 1179 aa20.83■□□□□ 0.92
CCM2-203ENST00000461377 NLRC5Q86WI3 1866 aa20.83■□□□□ 0.92
CCM2-203ENST00000461377 TRPA1O75762 1119 aa20.82■□□□□ 0.92
CCM2-203ENST00000461377 MT-ND3P03897 115 aa20.82■□□□□ 0.92
CCM2-203ENST00000461377 SF3A3Q12874 501 aaKnown RBP eCLIP20.82■□□□□ 0.92
CCM2-203ENST00000461377 EIF4EBP2Q13542 120 aaPredicted RBP20.82■□□□□ 0.92
CCM2-203ENST00000461377 PDK4Q16654 411 aa20.82■□□□□ 0.92
CCM2-203ENST00000461377 CGB2Q6NT52 195 aa20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms