RNA–Protein interactions for RNA: ENST00000460289.5

PTPN4-208, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-208ENST00000460289 CACNA2D2Q9NY47 1150 aa23.87■■□□□ 1.41
PTPN4-208ENST00000460289 INVSQ9Y283 1065 aa23.87■■□□□ 1.41
PTPN4-208ENST00000460289 PCDHGA5Q9Y5G8 931 aa23.87■■□□□ 1.41
PTPN4-208ENST00000460289 STON1Q9Y6Q2 735 aa23.87■■□□□ 1.41
PTPN4-208ENST00000460289 LGALS16A8MUM7 142 aa23.86■■□□□ 1.41
PTPN4-208ENST00000460289 TBL1XO60907 577 aa23.86■■□□□ 1.41
PTPN4-208ENST00000460289 LSM8O95777 96 aaKnown RBP23.86■■□□□ 1.41
PTPN4-208ENST00000460289 KLK7P49862 253 aa23.86■■□□□ 1.41
PTPN4-208ENST00000460289 UBXN1Q04323 297 aa23.86■■□□□ 1.41
PTPN4-208ENST00000460289 STARD3Q14849 445 aa23.86■■□□□ 1.41
PTPN4-208ENST00000460289 SYCP1Q15431 976 aa23.86■■□□□ 1.41
PTPN4-208ENST00000460289 ANO6Q4KMQ2 910 aa23.86■■□□□ 1.41
PTPN4-208ENST00000460289 ZC3H12AQ5D1E8 599 aaKnown RBP23.86■■□□□ 1.41
PTPN4-208ENST00000460289 NADSYN1Q6IA69 706 aa23.86■■□□□ 1.41
PTPN4-208ENST00000460289 SLC26A9Q7LBE3 791 aa23.86■■□□□ 1.41
PTPN4-208ENST00000460289 NOP9Q86U38 636 aaKnown RBP23.86■■□□□ 1.41
PTPN4-208ENST00000460289 ERICH1Q86X53 443 aa23.86■■□□□ 1.41
PTPN4-208ENST00000460289 AOPEPQ8N6M6 819 aa23.86■■□□□ 1.41
PTPN4-208ENST00000460289 MSANTD4Q8NCY6 345 aa23.86■■□□□ 1.41
PTPN4-208ENST00000460289 ZNF397Q8NF99 534 aaPredicted RBP23.86■■□□□ 1.41
PTPN4-208ENST00000460289 C18orf8Q96DM3 657 aa23.86■■□□□ 1.41
PTPN4-208ENST00000460289 BTN2A3PQ96KV6 586 aa23.86■■□□□ 1.41
PTPN4-208ENST00000460289 SPAG5Q96R06 1193 aa23.86■■□□□ 1.41
PTPN4-208ENST00000460289 ARRDC1-AS1Q9H2J1 176 aa23.86■■□□□ 1.41
PTPN4-208ENST00000460289 FAM204AQ9H8W3 233 aa23.86■■□□□ 1.41
PTPN4-208ENST00000460289 SIK3Q9Y2K2 1263 aa23.86■■□□□ 1.41
PTPN4-208ENST00000460289 SMTNL1A8MU46 457 aa23.85■■□□□ 1.41
PTPN4-208ENST00000460289 GRAP2O75791 330 aa23.85■■□□□ 1.41
PTPN4-208ENST00000460289 MOCS2O96007 188 aaPredicted RBP23.85■■□□□ 1.41
PTPN4-208ENST00000460289 GABRG2P18507 467 aa23.85■■□□□ 1.41
PTPN4-208ENST00000460289 SDHBP21912 280 aa23.85■■□□□ 1.41
PTPN4-208ENST00000460289 HLA-FP30511 346 aa23.85■■□□□ 1.41
PTPN4-208ENST00000460289 P2RY2P41231 377 aa23.85■■□□□ 1.41
PTPN4-208ENST00000460289 EIF4EBP2Q13542 120 aaPredicted RBP23.85■■□□□ 1.41
PTPN4-208ENST00000460289 RNF43Q68DV7 783 aa23.85■■□□□ 1.41
PTPN4-208ENST00000460289 CCDC117Q8IWD4 279 aaPredicted RBP23.85■■□□□ 1.41
PTPN4-208ENST00000460289 DDX51Q8N8A6 666 aaKnown RBP eCLIP23.85■■□□□ 1.41
PTPN4-208ENST00000460289 ATP6V0D2Q8N8Y2 350 aa23.85■■□□□ 1.41
PTPN4-208ENST00000460289 NEK11Q8NG66 645 aa23.85■■□□□ 1.41
PTPN4-208ENST00000460289 EPS8L1Q8TE68 723 aa23.85■■□□□ 1.41
PTPN4-208ENST00000460289 NLRC4Q9NPP4 1024 aa23.85■■□□□ 1.41
PTPN4-208ENST00000460289 RRN3Q9NYV6 651 aa23.85■■□□□ 1.41
PTPN4-208ENST00000460289 GGA2Q9UJY4 613 aa23.85■■□□□ 1.41
PTPN4-208ENST00000460289 EML5Q05BV3 1969 aa23.85■■□□□ 1.41
PTPN4-208ENST00000460289 WASH3PC4AMC7 463 aa23.84■■□□□ 1.41
PTPN4-208ENST00000460289 MAP3K13O43283 966 aa23.84■■□□□ 1.41
PTPN4-208ENST00000460289 GFPT2O94808 682 aa23.84■■□□□ 1.41
PTPN4-208ENST00000460289 ABCB4P21439 1286 aa23.84■■□□□ 1.41
PTPN4-208ENST00000460289 CCR1P32246 355 aa23.84■■□□□ 1.41
PTPN4-208ENST00000460289 NOS2P35228 1153 aa23.84■■□□□ 1.41
PTPN4-208ENST00000460289 SOX5P35711 763 aa23.84■■□□□ 1.41
PTPN4-208ENST00000460289 STAT1P42224 750 aa23.84■■□□□ 1.41
PTPN4-208ENST00000460289 GABRB2P47870 512 aa23.84■■□□□ 1.41
PTPN4-208ENST00000460289 SGSHP51688 502 aa23.84■■□□□ 1.41
PTPN4-208ENST00000460289 JAM2P57087 298 aa23.84■■□□□ 1.41
PTPN4-208ENST00000460289 MTA1Q13330 715 aa23.84■■□□□ 1.41
PTPN4-208ENST00000460289 ENPP2Q13822 863 aa23.84■■□□□ 1.41
PTPN4-208ENST00000460289 MS4A13Q5J8X5 152 aa23.84■■□□□ 1.41
PTPN4-208ENST00000460289 TMEM215Q68D42 235 aa23.84■■□□□ 1.41
PTPN4-208ENST00000460289 KIAA1211LQ6NV74 962 aa23.84■■□□□ 1.41
PTPN4-208ENST00000460289 KIAA0907Q7Z7F0 614 aaPredicted RBP23.84■■□□□ 1.41
PTPN4-208ENST00000460289 MFN1Q8IWA4 741 aa23.84■■□□□ 1.41
PTPN4-208ENST00000460289 AHI1Q8N157 1196 aa23.84■■□□□ 1.41
PTPN4-208ENST00000460289 RLN3Q8WXF3 142 aa23.84■■□□□ 1.41
PTPN4-208ENST00000460289 RNF34Q969K3 372 aa23.84■■□□□ 1.41
PTPN4-208ENST00000460289 ERGIC2Q96RQ1 377 aa23.84■■□□□ 1.41
PTPN4-208ENST00000460289 HSD3B7Q9H2F3 369 aa23.84■■□□□ 1.41
PTPN4-208ENST00000460289 CD248Q9HCU0 757 aa23.84■■□□□ 1.41
PTPN4-208ENST00000460289 ABCB8Q9NUT2 735 aa23.84■■□□□ 1.41
PTPN4-208ENST00000460289 DDIT4Q9NX09 232 aa23.84■■□□□ 1.41
PTPN4-208ENST00000460289 STIM2Q9P246 746 aa23.84■■□□□ 1.41
PTPN4-208ENST00000460289 PLA2G4CQ9UP65 541 aa23.84■■□□□ 1.41
PTPN4-208ENST00000460289 RAD54BQ9Y620 910 aa23.84■■□□□ 1.41
PTPN4-208ENST00000460289 KCNU1A8MYU2 1149 aa23.83■■□□□ 1.41
PTPN4-208ENST00000460289 SYNCRIPO60506 623 aaKnown RBP23.83■■□□□ 1.41
PTPN4-208ENST00000460289 ZNF217O75362 1048 aa23.83■■□□□ 1.41
PTPN4-208ENST00000460289 DAB1O75553 588 aa23.83■■□□□ 1.41
PTPN4-208ENST00000460289 PABPC1P11940 636 aaKnown RBP23.83■■□□□ 1.41
PTPN4-208ENST00000460289 SCNN1AP37088 669 aa23.83■■□□□ 1.41
PTPN4-208ENST00000460289 IL12RB1P42701 662 aa23.83■■□□□ 1.41
PTPN4-208ENST00000460289 PITX1P78337 314 aaPredicted RBP23.83■■□□□ 1.41
PTPN4-208ENST00000460289 ZNF234Q14588 700 aa23.83■■□□□ 1.41
PTPN4-208ENST00000460289 MAP7D1Q3KQU3 841 aa23.83■■□□□ 1.41
PTPN4-208ENST00000460289 PMS2CLQ68D20 193 aa23.83■■□□□ 1.41
PTPN4-208ENST00000460289 CHST9Q7L1S5 443 aa23.83■■□□□ 1.41
PTPN4-208ENST00000460289 FIBINQ8TAL6 211 aa23.83■■□□□ 1.41
PTPN4-208ENST00000460289 NUCKS1Q9H1E3 243 aaKnown RBP23.83■■□□□ 1.41
PTPN4-208ENST00000460289 TMEM51Q9NW97 253 aa23.83■■□□□ 1.41
PTPN4-208ENST00000460289 SPAG17Q6Q759 2223 aa23.83■■□□□ 1.4
PTPN4-208ENST00000460289 SYNJ2BP-COX16A0A087WUM0 186 aa23.82■■□□□ 1.4
PTPN4-208ENST00000460289 EPHB6O15197 1021 aa23.82■■□□□ 1.4
PTPN4-208ENST00000460289 ATP5BP06576 529 aaKnown RBP23.82■■□□□ 1.4
PTPN4-208ENST00000460289 MMEP08473 750 aa23.82■■□□□ 1.4
PTPN4-208ENST00000460289 ZNF806P0C7X5 589 aa23.82■■□□□ 1.4
PTPN4-208ENST00000460289 TACR2P21452 398 aa23.82■■□□□ 1.4
PTPN4-208ENST00000460289 BCKDHBP21953 392 aa23.82■■□□□ 1.4
PTPN4-208ENST00000460289 MATKP42679 507 aa23.82■■□□□ 1.4
PTPN4-208ENST00000460289 CDR2Q01850 454 aa23.82■■□□□ 1.4
PTPN4-208ENST00000460289 SPDYCQ5MJ68 293 aa23.82■■□□□ 1.4
PTPN4-208ENST00000460289 PRR23CQ6ZRP0 262 aa23.82■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms