RNA–Protein interactions for RNA: ENST00000460048.1

SHANK2-213, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5

Gene SHANK2, Length 736 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-213ENST00000460048 RAD54BQ9Y620 910 aa17.13■□□□□ 0.33
SHANK2-213ENST00000460048 PI4KAP42356 2102 aa17.12■□□□□ 0.33
SHANK2-213ENST00000460048 BCLAF3A2AJT9 711 aaKnown RBP17.12■□□□□ 0.33
SHANK2-213ENST00000460048 F8VZ95 297 aa17.12■□□□□ 0.33
SHANK2-213ENST00000460048 TIMM44O43615 452 aa17.12■□□□□ 0.33
SHANK2-213ENST00000460048 TBL1XO60907 577 aa17.12■□□□□ 0.33
SHANK2-213ENST00000460048 NDUFV2P19404 249 aa17.12■□□□□ 0.33
SHANK2-213ENST00000460048 SDHBP21912 280 aa17.12■□□□□ 0.33
SHANK2-213ENST00000460048 MPLP40238 635 aa17.12■□□□□ 0.33
SHANK2-213ENST00000460048 MYL5Q02045 173 aa17.12■□□□□ 0.33
SHANK2-213ENST00000460048 BYSLQ13895 437 aaKnown RBP17.12■□□□□ 0.33
SHANK2-213ENST00000460048 ZNF234Q14588 700 aa17.12■□□□□ 0.33
SHANK2-213ENST00000460048 NCAPHQ15003 741 aa17.12■□□□□ 0.33
SHANK2-213ENST00000460048 E2F5Q15329 346 aa17.12■□□□□ 0.33
SHANK2-213ENST00000460048 CCDC6Q16204 474 aa17.12■□□□□ 0.33
SHANK2-213ENST00000460048 OLFML1Q6UWY5 402 aa17.12■□□□□ 0.33
SHANK2-213ENST00000460048 FAM183BPQ6ZVS7 135 aa17.12■□□□□ 0.33
SHANK2-213ENST00000460048 DEFB106AQ8N104 65 aa17.12■□□□□ 0.33
SHANK2-213ENST00000460048 WFDC5Q8TCV5 224 aa17.12■□□□□ 0.33
SHANK2-213ENST00000460048 WFIKKN2Q8TEU8 576 aa17.12■□□□□ 0.33
SHANK2-213ENST00000460048 MYEOVQ96EZ4 313 aa17.12■□□□□ 0.33
SHANK2-213ENST00000460048 SPACA7Q96KW9 195 aa17.12■□□□□ 0.33
SHANK2-213ENST00000460048 PRICKLE1Q96MT3 831 aaPredicted RBP17.12■□□□□ 0.33
SHANK2-213ENST00000460048 DDX50Q9BQ39 737 aaKnown RBP17.12■□□□□ 0.33
SHANK2-213ENST00000460048 CALCOCO1Q9P1Z2 691 aa17.12■□□□□ 0.33
SHANK2-213ENST00000460048 LIMA1Q9UHB6 759 aaKnown RBP17.12■□□□□ 0.33
SHANK2-213ENST00000460048 CEP83Q9Y592 693 aa17.12■□□□□ 0.33
SHANK2-213ENST00000460048 DNAH14Q0VDD8 3507 aa17.11■□□□□ 0.33
SHANK2-213ENST00000460048 HSF2BPO75031 334 aa17.11■□□□□ 0.33
SHANK2-213ENST00000460048 KLK7P49862 253 aa17.11■□□□□ 0.33
SHANK2-213ENST00000460048 COPB1P53618 953 aaKnown RBP17.11■□□□□ 0.33
SHANK2-213ENST00000460048 SNX16P57768 344 aa17.11■□□□□ 0.33
SHANK2-213ENST00000460048 SF3A2Q15428 464 aaKnown RBP17.11■□□□□ 0.33
SHANK2-213ENST00000460048 DCAF6Q58WW2 860 aa17.11■□□□□ 0.33
SHANK2-213ENST00000460048 ZC3H12AQ5D1E8 599 aaKnown RBP17.11■□□□□ 0.33
SHANK2-213ENST00000460048 MS4A13Q5J8X5 152 aa17.11■□□□□ 0.33
SHANK2-213ENST00000460048 OR6B2Q6IFH4 312 aa17.11■□□□□ 0.33
SHANK2-213ENST00000460048 SLC26A9Q7LBE3 791 aa17.11■□□□□ 0.33
SHANK2-213ENST00000460048 ERMP1Q7Z2K6 904 aa17.11■□□□□ 0.33
SHANK2-213ENST00000460048 ADIPOR2Q86V24 386 aa17.11■□□□□ 0.33
SHANK2-213ENST00000460048 ZNF397Q8NF99 534 aaPredicted RBP17.11■□□□□ 0.33
SHANK2-213ENST00000460048 SORCS1Q8WY21 1168 aa17.11■□□□□ 0.33
SHANK2-213ENST00000460048 LMLNQ96KR4 655 aa17.11■□□□□ 0.33
SHANK2-213ENST00000460048 CIPCQ9C0C6 399 aa17.11■□□□□ 0.33
SHANK2-213ENST00000460048 NUCKS1Q9H1E3 243 aaKnown RBP17.11■□□□□ 0.33
SHANK2-213ENST00000460048 HSD3B7Q9H2F3 369 aa17.11■□□□□ 0.33
SHANK2-213ENST00000460048 VPS45Q9NRW7 570 aa17.11■□□□□ 0.33
SHANK2-213ENST00000460048 ABCB8Q9NUT2 735 aa17.11■□□□□ 0.33
SHANK2-213ENST00000460048 XPO7Q9UIA9 1087 aaKnown RBP17.11■□□□□ 0.33
SHANK2-213ENST00000460048 GGA2Q9UJY4 613 aa17.11■□□□□ 0.33
SHANK2-213ENST00000460048 SIK3Q9Y2K2 1263 aa17.11■□□□□ 0.33
SHANK2-213ENST00000460048 NYNRINQ9P2P1 1898 aaKnown RBP17.11■□□□□ 0.33
SHANK2-213ENST00000460048 LRRC10BA6NIK2 292 aa17.1■□□□□ 0.33
SHANK2-213ENST00000460048 GDF9O60383 454 aa17.1■□□□□ 0.33
SHANK2-213ENST00000460048 MOCS2O96007 188 aaPredicted RBP17.1■□□□□ 0.33
SHANK2-213ENST00000460048 APOEP02649 317 aa17.1■□□□□ 0.33
SHANK2-213ENST00000460048 TPM2P07951 284 aa17.1■□□□□ 0.33
SHANK2-213ENST00000460048 PABPC1P11940 636 aaKnown RBP17.1■□□□□ 0.33
SHANK2-213ENST00000460048 ZNF18P17022 549 aa17.1■□□□□ 0.33
SHANK2-213ENST00000460048 GABRB2P47870 512 aa17.1■□□□□ 0.33
SHANK2-213ENST00000460048 ATXN1P54253 815 aaKnown RBP17.1■□□□□ 0.33
SHANK2-213ENST00000460048 CDK17Q00537 523 aa17.1■□□□□ 0.33
SHANK2-213ENST00000460048 SLC6A3Q01959 620 aa17.1■□□□□ 0.33
SHANK2-213ENST00000460048 CREB5Q02930 508 aa17.1■□□□□ 0.33
SHANK2-213ENST00000460048 FUT11Q495W5 492 aa17.1■□□□□ 0.33
SHANK2-213ENST00000460048 FKBP15Q5T1M5 1219 aa17.1■□□□□ 0.33
SHANK2-213ENST00000460048 CHST9Q7L1S5 443 aa17.1■□□□□ 0.33
SHANK2-213ENST00000460048 NOP9Q86U38 636 aaKnown RBP17.1■□□□□ 0.33
SHANK2-213ENST00000460048 ZDHHC17Q8IUH5 632 aa17.1■□□□□ 0.33
SHANK2-213ENST00000460048 AHI1Q8N157 1196 aa17.1■□□□□ 0.33
SHANK2-213ENST00000460048 ZNF557Q8N988 423 aaPredicted RBP17.1■□□□□ 0.33
SHANK2-213ENST00000460048 HJURPQ8NCD3 748 aaPredicted RBP17.1■□□□□ 0.33
SHANK2-213ENST00000460048 TMEM35BQ8NCS4 154 aa17.1■□□□□ 0.33
SHANK2-213ENST00000460048 FIBINQ8TAL6 211 aa17.1■□□□□ 0.33
SHANK2-213ENST00000460048 NETO1Q8TDF5 533 aa17.1■□□□□ 0.33
SHANK2-213ENST00000460048 ERLEC1Q96DZ1 483 aa17.1■□□□□ 0.33
SHANK2-213ENST00000460048 BTN2A3PQ96KV6 586 aa17.1■□□□□ 0.33
SHANK2-213ENST00000460048 MRGPRX1Q96LB2 322 aa17.1■□□□□ 0.33
SHANK2-213ENST00000460048 SLC6A17Q9H1V8 727 aa17.1■□□□□ 0.33
SHANK2-213ENST00000460048 SMOC1Q9H4F8 434 aa17.1■□□□□ 0.33
SHANK2-213ENST00000460048 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.1■□□□□ 0.33
SHANK2-213ENST00000460048 CDV3Q9UKY7 258 aaKnown RBP17.1■□□□□ 0.33
SHANK2-213ENST00000460048 IGHV1OR15-9A0A0B4J2B8 117 aa17.09■□□□□ 0.33
SHANK2-213ENST00000460048 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.09■□□□□ 0.33
SHANK2-213ENST00000460048 KCNU1A8MYU2 1149 aa17.09■□□□□ 0.33
SHANK2-213ENST00000460048 EPHB6O15197 1021 aa17.09■□□□□ 0.33
SHANK2-213ENST00000460048 ZBTB24O43167 697 aaPredicted RBP17.09■□□□□ 0.33
SHANK2-213ENST00000460048 ZNF217O75362 1048 aa17.09■□□□□ 0.33
SHANK2-213ENST00000460048 DAB1O75553 588 aa17.09■□□□□ 0.33
SHANK2-213ENST00000460048 GRAP2O75791 330 aa17.09■□□□□ 0.33
SHANK2-213ENST00000460048 CAVIN2O95810 425 aa17.09■□□□□ 0.33
SHANK2-213ENST00000460048 PRKCHP24723 683 aa17.09■□□□□ 0.33
SHANK2-213ENST00000460048 CD70P32970 193 aa17.09■□□□□ 0.33
SHANK2-213ENST00000460048 JAM2P57087 298 aa17.09■□□□□ 0.33
SHANK2-213ENST00000460048 RPS24P62847 133 aaKnown RBP17.09■□□□□ 0.33
SHANK2-213ENST00000460048 TYRO3Q06418 890 aa17.09■□□□□ 0.33
SHANK2-213ENST00000460048 STARD3Q14849 445 aa17.09■□□□□ 0.33
SHANK2-213ENST00000460048 SPDYCQ5MJ68 293 aa17.09■□□□□ 0.33
SHANK2-213ENST00000460048 LPCAT2Q7L5N7 544 aa17.09■□□□□ 0.33
SHANK2-213ENST00000460048 APTXQ7Z2E3 356 aaKnown RBP17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms