RNA–Protein interactions for RNA: ENST00000458038.5

CPNE1-220, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-220ENST00000458038 CD19P15391 556 aa22.45■■□□□ 1.18
CPNE1-220ENST00000458038 PRCPP42785 496 aa22.45■■□□□ 1.18
CPNE1-220ENST00000458038 CBWD6Q4V339 395 aa22.45■■□□□ 1.18
CPNE1-220ENST00000458038 FNDC3BQ53EP0 1204 aaKnown RBP22.45■■□□□ 1.18
CPNE1-220ENST00000458038 CBWD3Q5JTY5 395 aa22.45■■□□□ 1.18
CPNE1-220ENST00000458038 CBWD5Q5RIA9 395 aa22.45■■□□□ 1.18
CPNE1-220ENST00000458038 ZNF658Q5TYW1 1059 aaPredicted RBP22.45■■□□□ 1.18
CPNE1-220ENST00000458038 UNC45BQ8IWX7 931 aa22.45■■□□□ 1.18
CPNE1-220ENST00000458038 ZC3H3Q8IXZ2 948 aaKnown RBP22.45■■□□□ 1.18
CPNE1-220ENST00000458038 SMYD4Q8IYR2 804 aaPredicted RBP22.45■■□□□ 1.18
CPNE1-220ENST00000458038 AHI1Q8N157 1196 aa22.45■■□□□ 1.18
CPNE1-220ENST00000458038 C1orf216Q8TAB5 229 aa22.45■■□□□ 1.18
CPNE1-220ENST00000458038 SORCS1Q8WY21 1168 aa22.45■■□□□ 1.18
CPNE1-220ENST00000458038 GAREM1Q9H706 876 aa22.45■■□□□ 1.18
CPNE1-220ENST00000458038 KIAA1522Q9P206 1035 aaPredicted RBP22.45■■□□□ 1.18
CPNE1-220ENST00000458038 ARMCX3Q9UH62 379 aaPredicted RBP22.45■■□□□ 1.18
CPNE1-220ENST00000458038 EIF2B4Q9UI10 523 aaKnown RBP22.45■■□□□ 1.18
CPNE1-220ENST00000458038 YJEFN3A6XGL0 299 aa22.44■■□□□ 1.18
CPNE1-220ENST00000458038 E7ENQ6 273 aa22.44■■□□□ 1.18
CPNE1-220ENST00000458038 IRAK2O43187 625 aa22.44■■□□□ 1.18
CPNE1-220ENST00000458038 CBFA2T3O75081 653 aa22.44■■□□□ 1.18
CPNE1-220ENST00000458038 PAEPP09466 180 aa22.44■■□□□ 1.18
CPNE1-220ENST00000458038 HLA-FP30511 346 aa22.44■■□□□ 1.18
CPNE1-220ENST00000458038 AFF3P51826 1226 aaKnown RBP22.44■■□□□ 1.18
CPNE1-220ENST00000458038 LRRC63Q05C16 580 aa22.44■■□□□ 1.18
CPNE1-220ENST00000458038 MSANTD2Q6P1R3 559 aa22.44■■□□□ 1.18
CPNE1-220ENST00000458038 IRGQQ8WZA9 623 aa22.44■■□□□ 1.18
CPNE1-220ENST00000458038 CDC6Q99741 560 aa22.44■■□□□ 1.18
CPNE1-220ENST00000458038 LHX5Q9H2C1 402 aa22.44■■□□□ 1.18
CPNE1-220ENST00000458038 OSGEPQ9NPF4 335 aa22.44■■□□□ 1.18
CPNE1-220ENST00000458038 TM7SF3Q9NS93 570 aa22.44■■□□□ 1.18
CPNE1-220ENST00000458038 SUN2Q9UH99 717 aa22.44■■□□□ 1.18
CPNE1-220ENST00000458038 PCOLCE2Q9UKZ9 415 aa22.44■■□□□ 1.18
CPNE1-220ENST00000458038 NBEAQ8NFP9 2946 aa22.44■■□□□ 1.18
CPNE1-220ENST00000458038 O00370 1275 aa22.43■■□□□ 1.18
CPNE1-220ENST00000458038 TSPAN3O60637 253 aa22.43■■□□□ 1.18
CPNE1-220ENST00000458038 SMC2O95347 1197 aa22.43■■□□□ 1.18
CPNE1-220ENST00000458038 DLDP09622 509 aaKnown RBP22.43■■□□□ 1.18
CPNE1-220ENST00000458038 SLC11A2P49281 568 aa22.43■■□□□ 1.18
CPNE1-220ENST00000458038 SUZ12Q15022 739 aaKnown RBP22.43■■□□□ 1.18
CPNE1-220ENST00000458038 STILQ15468 1287 aa22.43■■□□□ 1.18
CPNE1-220ENST00000458038 TEAD4Q15561 434 aa22.43■■□□□ 1.18
CPNE1-220ENST00000458038 PKDCCQ504Y2 493 aa22.43■■□□□ 1.18
CPNE1-220ENST00000458038 NUGGCQ68CJ6 796 aa22.43■■□□□ 1.18
CPNE1-220ENST00000458038 LCLAT1Q6UWP7 414 aa22.43■■□□□ 1.18
CPNE1-220ENST00000458038 DBX2Q6ZNG2 339 aa22.43■■□□□ 1.18
CPNE1-220ENST00000458038 CHST9Q7L1S5 443 aa22.43■■□□□ 1.18
CPNE1-220ENST00000458038 NDRG1Q92597 394 aaKnown RBP22.43■■□□□ 1.18
CPNE1-220ENST00000458038 EDEM1Q92611 657 aa22.43■■□□□ 1.18
CPNE1-220ENST00000458038 GOLGA1Q92805 767 aa22.43■■□□□ 1.18
CPNE1-220ENST00000458038 AZIN2Q96A70 460 aa22.43■■□□□ 1.18
CPNE1-220ENST00000458038 METTL14Q9HCE5 456 aaKnown RBP22.43■■□□□ 1.18
CPNE1-220ENST00000458038 ABCB8Q9NUT2 735 aa22.43■■□□□ 1.18
CPNE1-220ENST00000458038 SFMBT1Q9UHJ3 866 aa22.43■■□□□ 1.18
CPNE1-220ENST00000458038 GGA2Q9UJY4 613 aa22.43■■□□□ 1.18
CPNE1-220ENST00000458038 RALYQ9UKM9 306 aaKnown RBP22.43■■□□□ 1.18
CPNE1-220ENST00000458038 GOLGA4Q13439 2230 aaKnown RBP22.42■■□□□ 1.18
CPNE1-220ENST00000458038 PMM2O15305 246 aa22.42■■□□□ 1.18
CPNE1-220ENST00000458038 FLRT2O43155 660 aa22.42■■□□□ 1.18
CPNE1-220ENST00000458038 PABPC1P11940 636 aaKnown RBP22.42■■□□□ 1.18
CPNE1-220ENST00000458038 DAOAP59103 153 aa22.42■■□□□ 1.18
CPNE1-220ENST00000458038 RING1Q06587 406 aa22.42■■□□□ 1.18
CPNE1-220ENST00000458038 PNOCQ13519 176 aa22.42■■□□□ 1.18
CPNE1-220ENST00000458038 HLA-BQ31612 363 aa22.42■■□□□ 1.18
CPNE1-220ENST00000458038 ADIPOR2Q86V24 386 aa22.42■■□□□ 1.18
CPNE1-220ENST00000458038 UBR7Q8N806 425 aa22.42■■□□□ 1.18
CPNE1-220ENST00000458038 UBA3Q8TBC4 463 aa22.42■■□□□ 1.18
CPNE1-220ENST00000458038 SETD7Q8WTS6 366 aaKnown RBP22.42■■□□□ 1.18
CPNE1-220ENST00000458038 SLC35C1Q96A29 364 aa22.42■■□□□ 1.18
CPNE1-220ENST00000458038 BTBD1Q9H0C5 482 aa22.42■■□□□ 1.18
CPNE1-220ENST00000458038 KNTC1P50748 2209 aa22.42■■□□□ 1.18
CPNE1-220ENST00000458038 HLA-EP13747 358 aa22.41■■□□□ 1.18
CPNE1-220ENST00000458038 SFSWAPQ12872 951 aaKnown RBP22.41■■□□□ 1.18
CPNE1-220ENST00000458038 CNGA2Q16280 664 aa22.41■■□□□ 1.18
CPNE1-220ENST00000458038 TTC31Q49AM3 519 aaPredicted RBP22.41■■□□□ 1.18
CPNE1-220ENST00000458038 MBLAC2Q68D91 279 aa22.41■■□□□ 1.18
CPNE1-220ENST00000458038 ANKRD40Q6AI12 368 aa22.41■■□□□ 1.18
CPNE1-220ENST00000458038 CCNI2Q6ZMN8 369 aaPredicted RBP22.41■■□□□ 1.18
CPNE1-220ENST00000458038 FAM124AQ86V42 546 aa22.41■■□□□ 1.18
CPNE1-220ENST00000458038 PROSER1Q86XN7 944 aa22.41■■□□□ 1.18
CPNE1-220ENST00000458038 FMR1NBQ8N0W7 255 aaPredicted RBP22.41■■□□□ 1.18
CPNE1-220ENST00000458038 SLC35F5Q8WV83 523 aa22.41■■□□□ 1.18
CPNE1-220ENST00000458038 DDX50Q9BQ39 737 aaKnown RBP22.41■■□□□ 1.18
CPNE1-220ENST00000458038 HOOK1Q9UJC3 728 aaKnown RBP22.41■■□□□ 1.18
CPNE1-220ENST00000458038 SCML1Q9UN30 329 aa22.41■■□□□ 1.18
CPNE1-220ENST00000458038 ZBTB32Q9Y2Y4 487 aaPredicted RBP22.41■■□□□ 1.18
CPNE1-220ENST00000458038 BAHCC1Q9P281 2608 aa22.41■■□□□ 1.18
CPNE1-220ENST00000458038 FBXO21O94952 628 aa22.4■■□□□ 1.18
CPNE1-220ENST00000458038 IGLV3-27P01718 113 aa22.4■■□□□ 1.18
CPNE1-220ENST00000458038 DNTTP04053 509 aa22.4■■□□□ 1.18
CPNE1-220ENST00000458038 CAPNS1P04632 268 aa22.4■■□□□ 1.18
CPNE1-220ENST00000458038 POLR2EP19388 210 aaKnown RBP22.4■■□□□ 1.18
CPNE1-220ENST00000458038 GRIA4P48058 902 aa22.4■■□□□ 1.18
CPNE1-220ENST00000458038 BNC1Q01954 994 aa22.4■■□□□ 1.18
CPNE1-220ENST00000458038 CETN1Q12798 172 aa22.4■■□□□ 1.18
CPNE1-220ENST00000458038 STIM1Q13586 685 aa22.4■■□□□ 1.18
CPNE1-220ENST00000458038 PIK3R6Q5UE93 754 aa22.4■■□□□ 1.18
CPNE1-220ENST00000458038 LRSAM1Q6UWE0 723 aa22.4■■□□□ 1.18
CPNE1-220ENST00000458038 SPATA20Q8TB22 786 aa22.4■■□□□ 1.18
CPNE1-220ENST00000458038 CYB5D2Q8WUJ1 264 aa22.4■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 125.4 ms