RNA–Protein interactions for RNA: ENST00000457035.5

ATG4A-206, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 939 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-206ENST00000457035 CXCR3P49682 368 aa10.44□□□□□ -0.74
ATG4A-206ENST00000457035 CLCN5P51795 746 aa10.44□□□□□ -0.74
ATG4A-206ENST00000457035 AMPD2Q01433 879 aa10.44□□□□□ -0.74
ATG4A-206ENST00000457035 GAD2Q05329 585 aa10.44□□□□□ -0.74
ATG4A-206ENST00000457035 GFPT1Q06210 699 aaPredicted RBP10.44□□□□□ -0.74
ATG4A-206ENST00000457035 NME3Q13232 169 aa10.44□□□□□ -0.74
ATG4A-206ENST00000457035 PPP2R5DQ14738 602 aa10.44□□□□□ -0.74
ATG4A-206ENST00000457035 RAB6CQ53S08 254 aa10.44□□□□□ -0.74
ATG4A-206ENST00000457035 FAM133BQ5BKY9 247 aaKnown RBP10.44□□□□□ -0.74
ATG4A-206ENST00000457035 CCDC122Q5T0U0 273 aa10.44□□□□□ -0.74
ATG4A-206ENST00000457035 SH3PXD2AQ5TCZ1 1133 aa10.44□□□□□ -0.74
ATG4A-206ENST00000457035 NAIF1Q69YI7 327 aaPredicted RBP10.44□□□□□ -0.74
ATG4A-206ENST00000457035 CWF19L1Q69YN2 538 aaKnown RBP10.44□□□□□ -0.74
ATG4A-206ENST00000457035 NADSYN1Q6IA69 706 aa10.44□□□□□ -0.74
ATG4A-206ENST00000457035 C1orf228Q6PIY5 440 aa10.44□□□□□ -0.74
ATG4A-206ENST00000457035 TPGS1Q6ZTW0 290 aa10.44□□□□□ -0.74
ATG4A-206ENST00000457035 ETFBKMTQ8IXQ9 262 aa10.44□□□□□ -0.74
ATG4A-206ENST00000457035 FAM3CQ92520 227 aa10.44□□□□□ -0.74
ATG4A-206ENST00000457035 ATOH1Q92858 354 aaPredicted RBP10.44□□□□□ -0.74
ATG4A-206ENST00000457035 MSANTD3Q96H12 275 aa10.44□□□□□ -0.74
ATG4A-206ENST00000457035 TBCBQ99426 244 aa10.44□□□□□ -0.74
ATG4A-206ENST00000457035 NELL2Q99435 816 aa10.44□□□□□ -0.74
ATG4A-206ENST00000457035 OSBPL6Q9BZF3 934 aa10.44□□□□□ -0.74
ATG4A-206ENST00000457035 FOXQ1Q9C009 403 aa10.44□□□□□ -0.74
ATG4A-206ENST00000457035 RAB6CQ9H0N0 254 aa10.44□□□□□ -0.74
ATG4A-206ENST00000457035 FAM204AQ9H8W3 233 aa10.44□□□□□ -0.74
ATG4A-206ENST00000457035 LTB4R2Q9NPC1 389 aa10.44□□□□□ -0.74
ATG4A-206ENST00000457035 PARVAQ9NVD7 372 aa10.44□□□□□ -0.74
ATG4A-206ENST00000457035 TMEM51Q9NW97 253 aa10.44□□□□□ -0.74
ATG4A-206ENST00000457035 MARK1Q9P0L2 795 aa10.44□□□□□ -0.74
ATG4A-206ENST00000457035 CNOT8Q9UFF9 292 aaKnown RBP10.44□□□□□ -0.74
ATG4A-206ENST00000457035 XPO7Q9UIA9 1087 aaKnown RBP10.44□□□□□ -0.74
ATG4A-206ENST00000457035 FBXO10Q9UK96 956 aa10.44□□□□□ -0.74
ATG4A-206ENST00000457035 STAP1Q9ULZ2 295 aa10.44□□□□□ -0.74
ATG4A-206ENST00000457035 PIEZO1Q92508 2521 aa10.44□□□□□ -0.74
ATG4A-206ENST00000457035 KIAA1549LQ6ZVL6 1849 aa10.43□□□□□ -0.74
ATG4A-206ENST00000457035 SYNJ2BP-COX16A0A087WUM0 186 aa10.43□□□□□ -0.74
ATG4A-206ENST00000457035 A0A0A0MRY4 1105 aa10.43□□□□□ -0.74
ATG4A-206ENST00000457035 ANKRD62A6NC57 917 aa10.43□□□□□ -0.74
ATG4A-206ENST00000457035 TMEM191CA6NGB0 347 aa10.43□□□□□ -0.74
ATG4A-206ENST00000457035 FAM170BA6NMN3 283 aa10.43□□□□□ -0.74
ATG4A-206ENST00000457035 H0Y858 1186 aa10.43□□□□□ -0.74
ATG4A-206ENST00000457035 I6L893 689 aaPredicted RBP10.43□□□□□ -0.74
ATG4A-206ENST00000457035 HOXC11O43248 304 aaPredicted RBP10.43□□□□□ -0.74
ATG4A-206ENST00000457035 ADH1CP00326 375 aa10.43□□□□□ -0.74
ATG4A-206ENST00000457035 PENKP01210 267 aaPredicted RBP10.43□□□□□ -0.74
ATG4A-206ENST00000457035 MYBL1P10243 752 aa10.43□□□□□ -0.74
ATG4A-206ENST00000457035 SLC2A3P11169 496 aa10.43□□□□□ -0.74
ATG4A-206ENST00000457035 CHRNB1P11230 501 aa10.43□□□□□ -0.74
ATG4A-206ENST00000457035 ADH5P11766 374 aa10.43□□□□□ -0.74
ATG4A-206ENST00000457035 FECHP22830 423 aa10.43□□□□□ -0.74
ATG4A-206ENST00000457035 TARSP26639 723 aaKnown RBP10.43□□□□□ -0.74
ATG4A-206ENST00000457035 SDC4P31431 198 aa10.43□□□□□ -0.74
ATG4A-206ENST00000457035 SLC6A4P31645 630 aa10.43□□□□□ -0.74
ATG4A-206ENST00000457035 CCR1P32246 355 aa10.43□□□□□ -0.74
ATG4A-206ENST00000457035 PTPN9P43378 593 aa10.43□□□□□ -0.74
ATG4A-206ENST00000457035 SLC11A2P49281 568 aa10.43□□□□□ -0.74
ATG4A-206ENST00000457035 SULT1E1P49888 294 aa10.43□□□□□ -0.74
ATG4A-206ENST00000457035 ZNF143P52747 638 aaPredicted RBP10.43□□□□□ -0.74
ATG4A-206ENST00000457035 ATXN1P54253 815 aaKnown RBP10.43□□□□□ -0.74
ATG4A-206ENST00000457035 GALCP54803 685 aa10.43□□□□□ -0.74
ATG4A-206ENST00000457035 ATP11AP98196 1134 aa10.43□□□□□ -0.74
ATG4A-206ENST00000457035 OGDHQ02218 1023 aa10.43□□□□□ -0.74
ATG4A-206ENST00000457035 DEUP1Q05D60 604 aa10.43□□□□□ -0.74
ATG4A-206ENST00000457035 PON2Q15165 354 aa10.43□□□□□ -0.74
ATG4A-206ENST00000457035 C15orf59Q2T9L4 293 aaPredicted RBP10.43□□□□□ -0.74
ATG4A-206ENST00000457035 TMEM196Q5HYL7 178 aa10.43□□□□□ -0.74
ATG4A-206ENST00000457035 PIK3R6Q5UE93 754 aa10.43□□□□□ -0.74
ATG4A-206ENST00000457035 FYB2Q5VWT5 728 aa10.43□□□□□ -0.74
ATG4A-206ENST00000457035 DNAJC24Q6P3W2 148 aa10.43□□□□□ -0.74
ATG4A-206ENST00000457035 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.43□□□□□ -0.74
ATG4A-206ENST00000457035 C12orf40Q86WS4 652 aa10.43□□□□□ -0.74
ATG4A-206ENST00000457035 FLCNQ8NFG4 579 aa10.43□□□□□ -0.74
ATG4A-206ENST00000457035 CLDN23Q96B33 292 aa10.43□□□□□ -0.74
ATG4A-206ENST00000457035 BTN2A3PQ96KV6 586 aa10.43□□□□□ -0.74
ATG4A-206ENST00000457035 CCDC42Q96M95 316 aa10.43□□□□□ -0.74
ATG4A-206ENST00000457035 PANX2Q96RD6 677 aa10.43□□□□□ -0.74
ATG4A-206ENST00000457035 THAP2Q9H0W7 228 aa10.43□□□□□ -0.74
ATG4A-206ENST00000457035 MFSD1Q9H3U5 465 aa10.43□□□□□ -0.74
ATG4A-206ENST00000457035 WDCPQ9H6R7 721 aa10.43□□□□□ -0.74
ATG4A-206ENST00000457035 ANLNQ9NQW6 1124 aa10.43□□□□□ -0.74
ATG4A-206ENST00000457035 ARHGEF38Q9NXL2 777 aa10.43□□□□□ -0.74
ATG4A-206ENST00000457035 COX16Q9P0S2 106 aa10.43□□□□□ -0.74
ATG4A-206ENST00000457035 IMPACTQ9P2X3 320 aa10.43□□□□□ -0.74
ATG4A-206ENST00000457035 MRPS17Q9Y2R5 130 aaKnown RBP10.43□□□□□ -0.74
ATG4A-206ENST00000457035 SIT1Q9Y3P8 196 aa10.43□□□□□ -0.74
ATG4A-206ENST00000457035 NEDD8-MDP1E9PL57 170 aa10.42□□□□□ -0.74
ATG4A-206ENST00000457035 AKR1B10O60218 316 aa10.42□□□□□ -0.74
ATG4A-206ENST00000457035 GFRA3O60609 400 aa10.42□□□□□ -0.74
ATG4A-206ENST00000457035 APOEP02649 317 aa10.42□□□□□ -0.74
ATG4A-206ENST00000457035 CYP1A2P05177 515 aa10.42□□□□□ -0.74
ATG4A-206ENST00000457035 CISD3P0C7P0 127 aa10.42□□□□□ -0.74
ATG4A-206ENST00000457035 TYRP14679 529 aa10.42□□□□□ -0.74
ATG4A-206ENST00000457035 AOC1P19801 751 aa10.42□□□□□ -0.74
ATG4A-206ENST00000457035 ABCB4P21439 1286 aa10.42□□□□□ -0.74
ATG4A-206ENST00000457035 GPD1P21695 349 aa10.42□□□□□ -0.74
ATG4A-206ENST00000457035 EIF2DP41214 584 aaKnown RBP10.42□□□□□ -0.74
ATG4A-206ENST00000457035 HDAC4P56524 1084 aa10.42□□□□□ -0.74
ATG4A-206ENST00000457035 MESP2Q0VG99 397 aa10.42□□□□□ -0.74
ATG4A-206ENST00000457035 CCINQ13939 588 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms