RNA–Protein interactions for RNA: ENST00000456150.5

CSPG5-203, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

TSL 1 (best) BASIC

Gene CSPG5, Length 2,089 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-203ENST00000456150 DDX51Q8N8A6 666 aaKnown RBP eCLIP20.69■□□□□ 0.9
CSPG5-203ENST00000456150 DNAJB3Q8WWF6 145 aa20.69■□□□□ 0.9
CSPG5-203ENST00000456150 MECRQ9BV79 373 aa20.69■□□□□ 0.9
CSPG5-203ENST00000456150 STAP1Q9ULZ2 295 aa20.69■□□□□ 0.9
CSPG5-203ENST00000456150 MFHAS1Q9Y4C4 1052 aa20.69■□□□□ 0.9
CSPG5-203ENST00000456150 MFSD11O43934 449 aa20.68■□□□□ 0.9
CSPG5-203ENST00000456150 GLUD2P49448 558 aa20.68■□□□□ 0.9
CSPG5-203ENST00000456150 MFSD10Q14728 455 aa20.68■□□□□ 0.9
CSPG5-203ENST00000456150 PDK1Q15118 436 aa20.68■□□□□ 0.9
CSPG5-203ENST00000456150 CHI3L2Q15782 390 aa20.68■□□□□ 0.9
CSPG5-203ENST00000456150 DCAF6Q58WW2 860 aa20.68■□□□□ 0.9
CSPG5-203ENST00000456150 CASC4Q6P4E1 433 aa20.68■□□□□ 0.9
CSPG5-203ENST00000456150 ACMSDQ8TDX5 336 aa20.68■□□□□ 0.9
CSPG5-203ENST00000456150 RNF139Q8WU17 664 aa20.68■□□□□ 0.9
CSPG5-203ENST00000456150 LGMNQ99538 433 aa20.68■□□□□ 0.9
CSPG5-203ENST00000456150 TRIM56Q9BRZ2 755 aaKnown RBP20.68■□□□□ 0.9
CSPG5-203ENST00000456150 NAT9Q9BTE0 207 aa20.68■□□□□ 0.9
CSPG5-203ENST00000456150 FBXO6Q9NRD1 293 aaPredicted RBP20.68■□□□□ 0.9
CSPG5-203ENST00000456150 GEMIN8Q9NWZ8 242 aaKnown RBP20.68■□□□□ 0.9
CSPG5-203ENST00000456150 WDR27A2RRH5 827 aa20.68■□□□□ 0.9
CSPG5-203ENST00000456150 HMX2A2RU54 273 aa20.68■□□□□ 0.9
CSPG5-203ENST00000456150 PPP1R12AO14974 1030 aaPredicted RBP20.68■□□□□ 0.9
CSPG5-203ENST00000456150 AP1B1Q10567 949 aa20.68■□□□□ 0.9
CSPG5-203ENST00000456150 STXBP5Q5T5C0 1151 aa20.68■□□□□ 0.9
CSPG5-203ENST00000456150 STKLD1Q8NE28 680 aa20.68■□□□□ 0.9
CSPG5-203ENST00000456150 NT5C3BQ969T7 300 aa20.68■□□□□ 0.9
CSPG5-203ENST00000456150 FAM237BA0A1B0GVD1 139 aa20.67■□□□□ 0.9
CSPG5-203ENST00000456150 RNF103O00237 685 aa20.67■□□□□ 0.9
CSPG5-203ENST00000456150 FCHO1O14526 889 aa20.67■□□□□ 0.9
CSPG5-203ENST00000456150 ATP5BP06576 529 aaKnown RBP20.67■□□□□ 0.9
CSPG5-203ENST00000456150 BPGMP07738 259 aa20.67■□□□□ 0.9
CSPG5-203ENST00000456150 NPR3P17342 541 aa20.67■□□□□ 0.9
CSPG5-203ENST00000456150 PGAM1P18669 254 aa20.67■□□□□ 0.9
CSPG5-203ENST00000456150 LILRA4P59901 499 aa20.67■□□□□ 0.9
CSPG5-203ENST00000456150 OCRLQ01968 901 aa20.67■□□□□ 0.9
CSPG5-203ENST00000456150 SOX4Q06945 474 aaPredicted RBP20.67■□□□□ 0.9
CSPG5-203ENST00000456150 SREBF2Q12772 1141 aa20.67■□□□□ 0.9
CSPG5-203ENST00000456150 TEX44Q53QW1 395 aa20.67■□□□□ 0.9
CSPG5-203ENST00000456150 MORN1Q5T089 497 aa20.67■□□□□ 0.9
CSPG5-203ENST00000456150 UBXN11Q5T124 520 aa20.67■□□□□ 0.9
CSPG5-203ENST00000456150 KYAT3Q6YP21 454 aaKnown RBP20.67■□□□□ 0.9
CSPG5-203ENST00000456150 CRLF3Q8IUI8 442 aa20.67■□□□□ 0.9
CSPG5-203ENST00000456150 ENDOVQ8N8Q3 282 aaKnown RBP20.67■□□□□ 0.9
CSPG5-203ENST00000456150 GPATCH11Q8N954 259 aa20.67■□□□□ 0.9
CSPG5-203ENST00000456150 KCTD13Q8WZ19 329 aa20.67■□□□□ 0.9
CSPG5-203ENST00000456150 NUDCD1Q96RS6 583 aa20.67■□□□□ 0.9
CSPG5-203ENST00000456150 MIPEPQ99797 713 aa20.67■□□□□ 0.9
CSPG5-203ENST00000456150 CADM1Q9BY67 442 aaKnown RBP20.67■□□□□ 0.9
CSPG5-203ENST00000456150 WWP1Q9H0M0 922 aa20.67■□□□□ 0.9
CSPG5-203ENST00000456150 CXorf56Q9H5V9 222 aa20.67■□□□□ 0.9
CSPG5-203ENST00000456150 GOLGA2P5Q9HBQ8 144 aa20.67■□□□□ 0.9
CSPG5-203ENST00000456150 LRRC4Q9HBW1 653 aa20.67■□□□□ 0.9
CSPG5-203ENST00000456150 ZFYVE28Q9HCC9 887 aa20.67■□□□□ 0.9
CSPG5-203ENST00000456150 GYG2O15488 501 aa20.66■□□□□ 0.9
CSPG5-203ENST00000456150 FAM163BP0C2L3 166 aa20.66■□□□□ 0.9
CSPG5-203ENST00000456150 ESRRAP11474 423 aaPredicted RBP20.66■□□□□ 0.9
CSPG5-203ENST00000456150 TM4SF4P48230 202 aa20.66■□□□□ 0.9
CSPG5-203ENST00000456150 NIPAL4Q0D2K0 466 aa20.66■□□□□ 0.9
CSPG5-203ENST00000456150 IRF5Q13568 498 aa20.66■□□□□ 0.9
CSPG5-203ENST00000456150 BNIPLQ7Z465 357 aa20.66■□□□□ 0.9
CSPG5-203ENST00000456150 OSTM1Q86WC4 334 aa20.66■□□□□ 0.9
CSPG5-203ENST00000456150 PDCD7Q8N8D1 485 aaKnown RBP20.66■□□□□ 0.9
CSPG5-203ENST00000456150 TMEM40Q8WWA1 233 aa20.66■□□□□ 0.9
CSPG5-203ENST00000456150 P2RY11Q96G91 374 aa20.66■□□□□ 0.9
CSPG5-203ENST00000456150 NPY6RQ99463 290 aa20.66■□□□□ 0.9
CSPG5-203ENST00000456150 RNF39Q9H2S5 420 aa20.66■□□□□ 0.9
CSPG5-203ENST00000456150 GNEQ9Y223 722 aaKnown RBP20.66■□□□□ 0.9
CSPG5-203ENST00000456150 MYO18AQ92614 2054 aaKnown RBP20.66■□□□□ 0.9
CSPG5-203ENST00000456150 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.66■□□□□ 0.9
CSPG5-203ENST00000456150 CLNS1AP54105 237 aaKnown RBP20.66■□□□□ 0.9
CSPG5-203ENST00000456150 ADAM17P78536 824 aa20.66■□□□□ 0.9
CSPG5-203ENST00000456150 PAFAH1B3Q15102 231 aaKnown RBP20.66■□□□□ 0.9
CSPG5-203ENST00000456150 SIX6OS1Q8N1H7 587 aa20.66■□□□□ 0.9
CSPG5-203ENST00000456150 DENND2DQ9H6A0 471 aaPredicted RBP20.66■□□□□ 0.9
CSPG5-203ENST00000456150 NKX1-2Q9UD57 310 aaPredicted RBP20.66■□□□□ 0.9
CSPG5-203ENST00000456150 IPPQ9Y573 584 aa20.66■□□□□ 0.9
CSPG5-203ENST00000456150 DOCK3Q8IZD9 2030 aa20.66■□□□□ 0.9
CSPG5-203ENST00000456150 CCDC195A0A1B0GUA6 201 aa20.65■□□□□ 0.9
CSPG5-203ENST00000456150 M0QYT0 321 aa20.65■□□□□ 0.9
CSPG5-203ENST00000456150 AOC2O75106 756 aa20.65■□□□□ 0.9
CSPG5-203ENST00000456150 TPBGLP0DKB5 382 aa20.65■□□□□ 0.9
CSPG5-203ENST00000456150 PTPN1P18031 435 aaKnown RBP20.65■□□□□ 0.9
CSPG5-203ENST00000456150 GNAZP19086 355 aa20.65■□□□□ 0.9
CSPG5-203ENST00000456150 CTGFP29279 349 aa20.65■□□□□ 0.9
CSPG5-203ENST00000456150 PSEN2P49810 448 aa20.65■□□□□ 0.9
CSPG5-203ENST00000456150 OTUD1Q5VV17 481 aaPredicted RBP20.65■□□□□ 0.9
CSPG5-203ENST00000456150 ARID3BQ8IVW6 561 aaPredicted RBP20.65■□□□□ 0.9
CSPG5-203ENST00000456150 CFAP61Q8NHU2 1237 aa20.65■□□□□ 0.9
CSPG5-203ENST00000456150 MCUR1Q96AQ8 359 aa20.65■□□□□ 0.9
CSPG5-203ENST00000456150 HHIPL1Q96JK4 782 aa20.65■□□□□ 0.9
CSPG5-203ENST00000456150 SLC2A13Q96QE2 648 aa20.65■□□□□ 0.9
CSPG5-203ENST00000456150 SDAD1Q9NVU7 687 aaKnown RBP eCLIP20.65■□□□□ 0.9
CSPG5-203ENST00000456150 FLRT1Q9NZU1 646 aa20.65■□□□□ 0.9
CSPG5-203ENST00000456150 ZNF638Q14966 1978 aaKnown RBP20.65■□□□□ 0.9
CSPG5-203ENST00000456150 GSC2O15499 205 aa20.65■□□□□ 0.9
CSPG5-203ENST00000456150 GLRA3O75311 464 aa20.65■□□□□ 0.9
CSPG5-203ENST00000456150 SNNO75324 88 aaPredicted RBP20.65■□□□□ 0.9
CSPG5-203ENST00000456150 GM2AP17900 193 aa20.65■□□□□ 0.9
CSPG5-203ENST00000456150 LRPAP1P30533 357 aa20.65■□□□□ 0.9
CSPG5-203ENST00000456150 CRYBB1P53674 252 aaPredicted RBP20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms