RNA–Protein interactions for RNA: ENST00000453386.6

TRA2B-205, Transcript of transformer 2 beta homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRA2B, Length 2,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-205ENST00000453386 STN1Q9H668 368 aaKnown RBP16.19■□□□□ 0.18
TRA2B-205ENST00000453386 DMAP1Q9NPF5 467 aaPredicted RBP16.19■□□□□ 0.18
TRA2B-205ENST00000453386 POMPQ9Y244 141 aa16.19■□□□□ 0.18
TRA2B-205ENST00000453386 IGKV6-21A0A0C4DH24 114 aa16.18■□□□□ 0.18
TRA2B-205ENST00000453386 MDM4O15151 490 aa16.18■□□□□ 0.18
TRA2B-205ENST00000453386 ITGA2BP08514 1039 aa16.18■□□□□ 0.18
TRA2B-205ENST00000453386 RALBP11234 206 aa16.18■□□□□ 0.18
TRA2B-205ENST00000453386 UQCRBP14927 111 aa16.18■□□□□ 0.18
TRA2B-205ENST00000453386 VCLP18206 1134 aa16.18■□□□□ 0.18
TRA2B-205ENST00000453386 MGAT1P26572 445 aa16.18■□□□□ 0.18
TRA2B-205ENST00000453386 L1CAMP32004 1257 aa16.18■□□□□ 0.18
TRA2B-205ENST00000453386 DYNC1I2Q13409 638 aaKnown RBP16.18■□□□□ 0.18
TRA2B-205ENST00000453386 HNRNPDQ14103 355 aaKnown RBP16.18■□□□□ 0.18
TRA2B-205ENST00000453386 STILQ15468 1287 aa16.18■□□□□ 0.18
TRA2B-205ENST00000453386 GRAMD1BQ3KR37 738 aa16.18■□□□□ 0.18
TRA2B-205ENST00000453386 CES3Q6UWW8 571 aa16.18■□□□□ 0.18
TRA2B-205ENST00000453386 CXorf38Q8TB03 319 aa16.18■□□□□ 0.18
TRA2B-205ENST00000453386 ACMSDQ8TDX5 336 aa16.18■□□□□ 0.18
TRA2B-205ENST00000453386 ACTRT2Q8TDY3 377 aa16.18■□□□□ 0.18
TRA2B-205ENST00000453386 SORT1Q99523 831 aa16.18■□□□□ 0.18
TRA2B-205ENST00000453386 CEP41Q9BYV8 373 aa16.18■□□□□ 0.18
TRA2B-205ENST00000453386 RNPEPQ9H4A4 650 aa16.18■□□□□ 0.18
TRA2B-205ENST00000453386 MAN1C1Q9NR34 630 aa16.18■□□□□ 0.18
TRA2B-205ENST00000453386 ZNF358Q9NW07 568 aa16.18■□□□□ 0.18
TRA2B-205ENST00000453386 KLHL33A6NCF5 533 aa16.18■□□□□ 0.18
TRA2B-205ENST00000453386 ANKRD33BA6NCL7 494 aa16.18■□□□□ 0.18
TRA2B-205ENST00000453386 ARIH2O95376 493 aa16.18■□□□□ 0.18
TRA2B-205ENST00000453386 GRK2P25098 689 aa16.18■□□□□ 0.18
TRA2B-205ENST00000453386 TBL3Q12788 808 aaKnown RBP16.18■□□□□ 0.18
TRA2B-205ENST00000453386 MSLNQ13421 630 aaPredicted RBP16.18■□□□□ 0.18
TRA2B-205ENST00000453386 SEMA5AQ13591 1074 aa16.18■□□□□ 0.18
TRA2B-205ENST00000453386 TMEM132DQ14C87 1099 aa16.18■□□□□ 0.18
TRA2B-205ENST00000453386 STXBP5Q5T5C0 1151 aa16.18■□□□□ 0.18
TRA2B-205ENST00000453386 FRMD7Q6ZUT3 714 aa16.18■□□□□ 0.18
TRA2B-205ENST00000453386 AGR3Q8TD06 166 aa16.18■□□□□ 0.18
TRA2B-205ENST00000453386 ATXN7L3BQ96GX2 97 aa16.18■□□□□ 0.18
TRA2B-205ENST00000453386 LGMNQ99538 433 aa16.18■□□□□ 0.18
TRA2B-205ENST00000453386 GPR20Q99678 358 aa16.18■□□□□ 0.18
TRA2B-205ENST00000453386 TMEM216Q9P0N5 145 aa16.18■□□□□ 0.18
TRA2B-205ENST00000453386 MFHAS1Q9Y4C4 1052 aa16.18■□□□□ 0.18
TRA2B-205ENST00000453386 DPYSL4O14531 572 aa16.17■□□□□ 0.18
TRA2B-205ENST00000453386 ARRB2P32121 409 aa16.17■□□□□ 0.18
TRA2B-205ENST00000453386 ZNF280AP59817 542 aaPredicted RBP16.17■□□□□ 0.18
TRA2B-205ENST00000453386 ABCE1P61221 599 aaKnown RBP16.17■□□□□ 0.18
TRA2B-205ENST00000453386 USP4Q13107 963 aa16.17■□□□□ 0.18
TRA2B-205ENST00000453386 SLC10A6Q3KNW5 377 aa16.17■□□□□ 0.18
TRA2B-205ENST00000453386 EXOC8Q8IYI6 725 aa16.17■□□□□ 0.18
TRA2B-205ENST00000453386 TNS4Q8IZW8 715 aa16.17■□□□□ 0.18
TRA2B-205ENST00000453386 KHSRPQ92945 711 aaKnown RBP eCLIP16.17■□□□□ 0.185e-7■■□□□ 13.4
TRA2B-205ENST00000453386 OLFM3Q96PB7 478 aa16.17■□□□□ 0.18
TRA2B-205ENST00000453386 PACSIN3Q9UKS6 424 aa16.17■□□□□ 0.18
TRA2B-205ENST00000453386 GJA3Q9Y6H8 435 aa16.17■□□□□ 0.18
TRA2B-205ENST00000453386 PHIPQ8WWQ0 1821 aa16.17■□□□□ 0.18
TRA2B-205ENST00000453386 E9PBE3 544 aa16.17■□□□□ 0.18
TRA2B-205ENST00000453386 PAPSS1O43252 624 aaPredicted RBP16.17■□□□□ 0.18
TRA2B-205ENST00000453386 KLHL41O60662 606 aa16.17■□□□□ 0.18
TRA2B-205ENST00000453386 STK10O94804 968 aaKnown RBP16.17■□□□□ 0.18
TRA2B-205ENST00000453386 ERVK-10P10266 1014 aa16.17■□□□□ 0.18
TRA2B-205ENST00000453386 TGFB3P10600 412 aa16.17■□□□□ 0.18
TRA2B-205ENST00000453386 ITGAXP20702 1163 aa16.17■□□□□ 0.18
TRA2B-205ENST00000453386 RPS6KA3P51812 740 aa16.17■□□□□ 0.18
TRA2B-205ENST00000453386 DBN1Q16643 649 aa16.17■□□□□ 0.18
TRA2B-205ENST00000453386 PGM2L1Q6PCE3 622 aa16.17■□□□□ 0.18
TRA2B-205ENST00000453386 TTC30AQ86WT1 665 aa16.17■□□□□ 0.18
TRA2B-205ENST00000453386 COLGALT1Q8NBJ5 622 aa16.17■□□□□ 0.18
TRA2B-205ENST00000453386 TFB1MQ8WVM0 346 aaKnown RBP16.17■□□□□ 0.18
TRA2B-205ENST00000453386 HTR3CQ8WXA8 447 aa16.17■□□□□ 0.18
TRA2B-205ENST00000453386 JADE3Q92613 823 aa16.17■□□□□ 0.18
TRA2B-205ENST00000453386 AZIN2Q96A70 460 aa16.17■□□□□ 0.18
TRA2B-205ENST00000453386 CCDC28BQ9BUN5 200 aa16.17■□□□□ 0.18
TRA2B-205ENST00000453386 PDGFDQ9GZP0 370 aaPredicted RBP16.17■□□□□ 0.18
TRA2B-205ENST00000453386 VCX3AQ9NNX9 186 aa16.17■□□□□ 0.18
TRA2B-205ENST00000453386 DNAJC28Q9NX36 388 aa16.17■□□□□ 0.18
TRA2B-205ENST00000453386 ZDHHC7Q9NXF8 308 aa16.17■□□□□ 0.18
TRA2B-205ENST00000453386 SEPT10Q9P0V9 454 aa16.17■□□□□ 0.18
TRA2B-205ENST00000453386 COPG2Q9UBF2 871 aa16.17■□□□□ 0.18
TRA2B-205ENST00000453386 AP4E1Q9UPM8 1137 aa16.17■□□□□ 0.18
TRA2B-205ENST00000453386 UTRNP46939 3433 aa16.17■□□□□ 0.18
TRA2B-205ENST00000453386 ZFXP17010 805 aaPredicted RBP16.17■□□□□ 0.18
TRA2B-205ENST00000453386 RBP5P82980 135 aa16.17■□□□□ 0.18
TRA2B-205ENST00000453386 VPS33BQ9H267 617 aa16.17■□□□□ 0.18
TRA2B-205ENST00000453386 DPP3Q9NY33 737 aa16.17■□□□□ 0.18
TRA2B-205ENST00000453386 STK32BQ9NY57 414 aa16.17■□□□□ 0.18
TRA2B-205ENST00000453386 DTLQ9NZJ0 730 aa16.17■□□□□ 0.18
TRA2B-205ENST00000453386 ZNF112Q9UJU3 913 aa16.17■□□□□ 0.18
TRA2B-205ENST00000453386 KIAA1257Q9ULG3 409 aa16.17■□□□□ 0.18
TRA2B-205ENST00000453386 CPA3P15088 417 aa16.16■□□□□ 0.18
TRA2B-205ENST00000453386 MLH1P40692 756 aa16.16■□□□□ 0.18
TRA2B-205ENST00000453386 NIPAL4Q0D2K0 466 aa16.16■□□□□ 0.18
TRA2B-205ENST00000453386 INCA1Q0VD86 236 aa16.16■□□□□ 0.18
TRA2B-205ENST00000453386 CMC1Q7Z7K0 106 aa16.16■□□□□ 0.18
TRA2B-205ENST00000453386 FBXW8Q8N3Y1 598 aa16.16■□□□□ 0.18
TRA2B-205ENST00000453386 C7orf31Q8N865 590 aa16.16■□□□□ 0.18
TRA2B-205ENST00000453386 SPATA33Q96N06 139 aa16.16■□□□□ 0.18
TRA2B-205ENST00000453386 QKIQ96PU8 341 aaKnown RBP eCLIP16.16■□□□□ 0.182e-8■■□□□ 11.6
TRA2B-205ENST00000453386 CSPG4P5Q96PW8 444 aa16.16■□□□□ 0.18
TRA2B-205ENST00000453386 FAM96AQ9H5X1 160 aa16.16■□□□□ 0.18
TRA2B-205ENST00000453386 HESX1Q9UBX0 185 aa16.16■□□□□ 0.18
TRA2B-205ENST00000453386 MYO18AQ92614 2054 aaKnown RBP16.16■□□□□ 0.18
TRA2B-205ENST00000453386 ADCY6O43306 1168 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms