RNA–Protein interactions for RNA: ENST00000453285.1

SDC4P-201, Transcript of syndecan 4 pseudogene, humanhuman

BASIC

Gene SDC4P, Length 601 nt, Biotype processed pseudogene, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC4P-201ENST00000453285 ZNF683Q8IZ20 524 aa6.21□□□□□ -1.42
SDC4P-201ENST00000453285 ALLCQ8N6M5 410 aa6.21□□□□□ -1.42
SDC4P-201ENST00000453285 EIF1ADQ8N9N8 165 aaKnown RBP6.21□□□□□ -1.42
SDC4P-201ENST00000453285 GLIS1Q8NBF1 620 aa6.21□□□□□ -1.42
SDC4P-201ENST00000453285 KREMEN2Q8NCW0 462 aa6.21□□□□□ -1.42
SDC4P-201ENST00000453285 HNRNPLLQ8WVV9 542 aaKnown RBP6.21□□□□□ -1.42
SDC4P-201ENST00000453285 C1orf74Q96LT6 269 aa6.21□□□□□ -1.42
SDC4P-201ENST00000453285 EMILIN2Q9BXX0 1053 aa6.21□□□□□ -1.42
SDC4P-201ENST00000453285 MAK16Q9BXY0 300 aaKnown RBP6.21□□□□□ -1.42
SDC4P-201ENST00000453285 PBX4Q9BYU1 374 aa6.21□□□□□ -1.42
SDC4P-201ENST00000453285 KLC2Q9H0B6 622 aa6.21□□□□□ -1.42
SDC4P-201ENST00000453285 RNF38Q9H0F5 515 aa6.21□□□□□ -1.42
SDC4P-201ENST00000453285 NEUROG2Q9H2A3 272 aa6.21□□□□□ -1.42
SDC4P-201ENST00000453285 C10orf88Q9H8K7 445 aa6.21□□□□□ -1.42
SDC4P-201ENST00000453285 PRDM16Q9HAZ2 1276 aa6.21□□□□□ -1.42
SDC4P-201ENST00000453285 USP29Q9HBJ7 922 aa6.21□□□□□ -1.42
SDC4P-201ENST00000453285 ENTPD7Q9NQZ7 604 aa6.21□□□□□ -1.42
SDC4P-201ENST00000453285 ARHGEF4Q9NR80 690 aa6.21□□□□□ -1.42
SDC4P-201ENST00000453285 GRHL1Q9NZI5 618 aa6.21□□□□□ -1.42
SDC4P-201ENST00000453285 MARCH2Q9P0N8 246 aa6.21□□□□□ -1.42
SDC4P-201ENST00000453285 OR12D3Q9UGF7 316 aa6.21□□□□□ -1.42
SDC4P-201ENST00000453285 XPO7Q9UIA9 1087 aaKnown RBP6.21□□□□□ -1.42
SDC4P-201ENST00000453285 RASAL2Q9UJF2 1139 aa6.21□□□□□ -1.42
SDC4P-201ENST00000453285 ASB3Q9Y575 518 aa6.21□□□□□ -1.42
SDC4P-201ENST00000453285 BRWD1Q9NSI6 2320 aa6.21□□□□□ -1.42
SDC4P-201ENST00000453285 MYLKQ15746 1914 aa6.21□□□□□ -1.42
SDC4P-201ENST00000453285 SLC12A8A0AV02 714 aa6.2□□□□□ -1.42
SDC4P-201ENST00000453285 BCLAF3A2AJT9 711 aaKnown RBP6.2□□□□□ -1.42
SDC4P-201ENST00000453285 C2orf78A6NCI8 922 aa6.2□□□□□ -1.42
SDC4P-201ENST00000453285 H0YGN5 161 aa6.2□□□□□ -1.42
SDC4P-201ENST00000453285 COCHO43405 550 aa6.2□□□□□ -1.42
SDC4P-201ENST00000453285 CREB3O43889 395 aa6.2□□□□□ -1.42
SDC4P-201ENST00000453285 LRIG2O94898 1065 aa6.2□□□□□ -1.42
SDC4P-201ENST00000453285 ECEL1O95672 775 aa6.2□□□□□ -1.42
SDC4P-201ENST00000453285 OLFM2O95897 454 aa6.2□□□□□ -1.42
SDC4P-201ENST00000453285 GLUD1P00367 558 aa6.2□□□□□ -1.42
SDC4P-201ENST00000453285 OAS1P00973 400 aaKnown RBP6.2□□□□□ -1.42
SDC4P-201ENST00000453285 KRT14P02533 472 aa6.2□□□□□ -1.42
SDC4P-201ENST00000453285 ZSCAN5DPP0CG00 497 aa6.2□□□□□ -1.42
SDC4P-201ENST00000453285 RBP3P10745 1247 aa6.2□□□□□ -1.42
SDC4P-201ENST00000453285 SLC2A3P11169 496 aa6.2□□□□□ -1.42
SDC4P-201ENST00000453285 ETS1P14921 441 aa6.2□□□□□ -1.42
SDC4P-201ENST00000453285 EPCAMP16422 314 aa6.2□□□□□ -1.42
SDC4P-201ENST00000453285 ZFXP17010 805 aaPredicted RBP6.2□□□□□ -1.42
SDC4P-201ENST00000453285 MCM3P25205 808 aa6.2□□□□□ -1.42
SDC4P-201ENST00000453285 BMP8BP34820 402 aa6.2□□□□□ -1.42
SDC4P-201ENST00000453285 CA8P35219 290 aa6.2□□□□□ -1.42
SDC4P-201ENST00000453285 ATP5C1P36542 298 aaKnown RBP6.2□□□□□ -1.42
SDC4P-201ENST00000453285 GGCXP38435 758 aa6.2□□□□□ -1.42
SDC4P-201ENST00000453285 RPL21P46778 160 aaKnown RBP6.2□□□□□ -1.42
SDC4P-201ENST00000453285 PPP3CCP48454 512 aa6.2□□□□□ -1.42
SDC4P-201ENST00000453285 NR2C2P49116 596 aa6.2□□□□□ -1.42
SDC4P-201ENST00000453285 TUBP50607 506 aa6.2□□□□□ -1.42
SDC4P-201ENST00000453285 KCNQ1P51787 676 aa6.2□□□□□ -1.42
SDC4P-201ENST00000453285 ZNF135P52742 658 aaPredicted RBP6.2□□□□□ -1.42
SDC4P-201ENST00000453285 GDF10P55107 478 aa6.2□□□□□ -1.42
SDC4P-201ENST00000453285 EIF3EP60228 445 aaKnown RBP6.2□□□□□ -1.42
SDC4P-201ENST00000453285 GBE1Q04446 702 aa6.2□□□□□ -1.42
SDC4P-201ENST00000453285 XRCC4Q13426 336 aa6.2□□□□□ -1.42
SDC4P-201ENST00000453285 MS4A13Q5J8X5 152 aa6.2□□□□□ -1.42
SDC4P-201ENST00000453285 HECTD3Q5T447 861 aa6.2□□□□□ -1.42
SDC4P-201ENST00000453285 PIK3R6Q5UE93 754 aa6.2□□□□□ -1.42
SDC4P-201ENST00000453285 NADSYN1Q6IA69 706 aa6.2□□□□□ -1.42
SDC4P-201ENST00000453285 PDE12Q6L8Q7 609 aaKnown RBP6.2□□□□□ -1.42
SDC4P-201ENST00000453285 ZDHHC24Q6UX98 284 aa6.2□□□□□ -1.42
SDC4P-201ENST00000453285 CCDC149Q6ZUS6 474 aa6.2□□□□□ -1.42
SDC4P-201ENST00000453285 SYDE1Q6ZW31 735 aaPredicted RBP6.2□□□□□ -1.42
SDC4P-201ENST00000453285 GAREM2Q75VX8 874 aa6.2□□□□□ -1.42
SDC4P-201ENST00000453285 B4GALNT4Q76KP1 1039 aa6.2□□□□□ -1.42
SDC4P-201ENST00000453285 RTL10Q7L3V2 364 aa6.2□□□□□ -1.42
SDC4P-201ENST00000453285 ADGRD2Q7Z7M1 963 aa6.2□□□□□ -1.42
SDC4P-201ENST00000453285 ITIH5Q86UX2 942 aa6.2□□□□□ -1.42
SDC4P-201ENST00000453285 UNC45BQ8IWX7 931 aa6.2□□□□□ -1.42
SDC4P-201ENST00000453285 TP53INP2Q8IXH6 220 aa6.2□□□□□ -1.42
SDC4P-201ENST00000453285 GSPT2Q8IYD1 628 aaKnown RBP6.2□□□□□ -1.42
SDC4P-201ENST00000453285 HS6ST3Q8IZP7 471 aa6.2□□□□□ -1.42
SDC4P-201ENST00000453285 TRAF3IP1Q8TDR0 691 aaPredicted RBP6.2□□□□□ -1.42
SDC4P-201ENST00000453285 MICAL1Q8TDZ2 1067 aa6.2□□□□□ -1.42
SDC4P-201ENST00000453285 AENQ8WTP8 325 aaKnown RBP6.2□□□□□ -1.42
SDC4P-201ENST00000453285 GRK7Q8WTQ7 553 aa6.2□□□□□ -1.42
SDC4P-201ENST00000453285 P3H4Q92791 437 aa6.2□□□□□ -1.42
SDC4P-201ENST00000453285 RNF34Q969K3 372 aa6.2□□□□□ -1.42
SDC4P-201ENST00000453285 WBP2Q969T9 261 aa6.2□□□□□ -1.42
SDC4P-201ENST00000453285 ZFRQ96KR1 1074 aaKnown RBP6.2□□□□□ -1.42
SDC4P-201ENST00000453285 ZNF512Q96ME7 567 aaPredicted RBP6.2□□□□□ -1.42
SDC4P-201ENST00000453285 OLFM3Q96PB7 478 aa6.2□□□□□ -1.42
SDC4P-201ENST00000453285 CDK5RAP1Q96SZ6 601 aaKnown RBP6.2□□□□□ -1.42
SDC4P-201ENST00000453285 PRMT1Q99873 361 aaKnown RBP6.2□□□□□ -1.42
SDC4P-201ENST00000453285 TMEM121Q9BTD3 319 aa6.2□□□□□ -1.42
SDC4P-201ENST00000453285 KLF16Q9BXK1 252 aaPredicted RBP6.2□□□□□ -1.42
SDC4P-201ENST00000453285 SIK2Q9H0K1 926 aa6.2□□□□□ -1.42
SDC4P-201ENST00000453285 RAB17Q9H0T7 212 aa6.2□□□□□ -1.42
SDC4P-201ENST00000453285 DPH5Q9H2P9 285 aa6.2□□□□□ -1.42
SDC4P-201ENST00000453285 NKX2-4Q9H2Z4 354 aa6.2□□□□□ -1.42
SDC4P-201ENST00000453285 FAM114A2Q9NRY5 505 aa6.2□□□□□ -1.42
SDC4P-201ENST00000453285 ZDHHC18Q9NUE0 388 aa6.2□□□□□ -1.42
SDC4P-201ENST00000453285 ZNF446Q9NWS9 450 aa6.2□□□□□ -1.42
SDC4P-201ENST00000453285 DTLQ9NZJ0 730 aa6.2□□□□□ -1.42
SDC4P-201ENST00000453285 TRPM5Q9NZQ8 1165 aa6.2□□□□□ -1.42
SDC4P-201ENST00000453285 UXTQ9UBK9 157 aaPredicted RBP6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms