RNA–Protein interactions for RNA: ENST00000452047.1

CPSF4-208, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 687 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-208ENST00000452047 ZBTB24O43167 697 aaPredicted RBP12.97□□□□□ -0.33
CPSF4-208ENST00000452047 IRAK2O43187 625 aa12.97□□□□□ -0.33
CPSF4-208ENST00000452047 TIMM44O43615 452 aa12.97□□□□□ -0.33
CPSF4-208ENST00000452047 ACSL4O60488 711 aa12.97□□□□□ -0.33
CPSF4-208ENST00000452047 IGLV3-25P01717 112 aa12.97□□□□□ -0.33
CPSF4-208ENST00000452047 MTIF2P46199 727 aaKnown RBP12.97□□□□□ -0.33
CPSF4-208ENST00000452047 SLC11A2P49281 568 aa12.97□□□□□ -0.33
CPSF4-208ENST00000452047 COPAP53621 1224 aa12.97□□□□□ -0.33
CPSF4-208ENST00000452047 PDCLQ13371 301 aa12.97□□□□□ -0.33
CPSF4-208ENST00000452047 E2F5Q15329 346 aa12.97□□□□□ -0.33
CPSF4-208ENST00000452047 MAN2A1Q16706 1144 aa12.97□□□□□ -0.33
CPSF4-208ENST00000452047 TRIM61Q5EBN2 209 aa12.97□□□□□ -0.33
CPSF4-208ENST00000452047 MIIPQ5JXC2 388 aa12.97□□□□□ -0.33
CPSF4-208ENST00000452047 SYPL2Q5VXT5 272 aa12.97□□□□□ -0.33
CPSF4-208ENST00000452047 SMYD5Q6GMV2 418 aa12.97□□□□□ -0.33
CPSF4-208ENST00000452047 DPY19L2P1Q6NXN4 242 aa12.97□□□□□ -0.33
CPSF4-208ENST00000452047 KIAA1324Q6UXG2 1013 aaKnown RBP12.97□□□□□ -0.33
CPSF4-208ENST00000452047 METTL3Q86U44 580 aaKnown RBP12.97□□□□□ -0.33
CPSF4-208ENST00000452047 TAC4Q86UU9 113 aa12.97□□□□□ -0.33
CPSF4-208ENST00000452047 ADIPOR2Q86V24 386 aa12.97□□□□□ -0.33
CPSF4-208ENST00000452047 SLC41A1Q8IVJ1 513 aa12.97□□□□□ -0.33
CPSF4-208ENST00000452047 WFIKKN2Q8TEU8 576 aa12.97□□□□□ -0.33
CPSF4-208ENST00000452047 MYEOVQ96EZ4 313 aa12.97□□□□□ -0.33
CPSF4-208ENST00000452047 SERPINB11Q96P15 392 aa12.97□□□□□ -0.33
CPSF4-208ENST00000452047 NUP62CLQ9H1M0 184 aa12.97□□□□□ -0.33
CPSF4-208ENST00000452047 ABCB8Q9NUT2 735 aa12.97□□□□□ -0.33
CPSF4-208ENST00000452047 USP36Q9P275 1121 aaKnown RBP12.97□□□□□ -0.33
CPSF4-208ENST00000452047 TJP2Q9UDY2 1190 aa12.97□□□□□ -0.33
CPSF4-208ENST00000452047 TLR6Q9Y2C9 796 aa12.97□□□□□ -0.33
CPSF4-208ENST00000452047 ADAMTS9Q9P2N4 1935 aa12.97□□□□□ -0.33
CPSF4-208ENST00000452047 TPRP12270 2363 aaKnown RBP12.96□□□□□ -0.33
CPSF4-208ENST00000452047 ASCC3Q8N3C0 2202 aaKnown RBP12.96□□□□□ -0.33
CPSF4-208ENST00000452047 C7P10643 843 aa12.96□□□□□ -0.33
CPSF4-208ENST00000452047 PABPC1P11940 636 aaKnown RBP12.96□□□□□ -0.33
CPSF4-208ENST00000452047 ERCC5P28715 1186 aaPredicted RBP12.96□□□□□ -0.33
CPSF4-208ENST00000452047 DPP6P42658 865 aa12.96□□□□□ -0.33
CPSF4-208ENST00000452047 ZNF33AQ06730 810 aa12.96□□□□□ -0.33
CPSF4-208ENST00000452047 EIF4EBP2Q13542 120 aaPredicted RBP12.96□□□□□ -0.33
CPSF4-208ENST00000452047 SLC23A3Q6PIS1 610 aa12.96□□□□□ -0.33
CPSF4-208ENST00000452047 SERPINA13PQ6UXR4 307 aa12.96□□□□□ -0.33
CPSF4-208ENST00000452047 CHST9Q7L1S5 443 aa12.96□□□□□ -0.33
CPSF4-208ENST00000452047 AHI1Q8N157 1196 aa12.96□□□□□ -0.33
CPSF4-208ENST00000452047 WDTC1Q8N5D0 677 aa12.96□□□□□ -0.33
CPSF4-208ENST00000452047 DEFB119Q8N690 84 aa12.96□□□□□ -0.33
CPSF4-208ENST00000452047 ADAM32Q8TC27 787 aa12.96□□□□□ -0.33
CPSF4-208ENST00000452047 LMLNQ96KR4 655 aa12.96□□□□□ -0.33
CPSF4-208ENST00000452047 HSPA12BQ96MM6 686 aa12.96□□□□□ -0.33
CPSF4-208ENST00000452047 TRIM62Q9BVG3 475 aa12.96□□□□□ -0.33
CPSF4-208ENST00000452047 TMEM245Q9H330 911 aa12.96□□□□□ -0.33
CPSF4-208ENST00000452047 PRDM16Q9HAZ2 1276 aa12.96□□□□□ -0.33
CPSF4-208ENST00000452047 POPDC2Q9HBU9 364 aa12.96□□□□□ -0.33
CPSF4-208ENST00000452047 TMEM9BQ9NQ34 198 aa12.96□□□□□ -0.33
CPSF4-208ENST00000452047 GGA2Q9UJY4 613 aa12.96□□□□□ -0.33
CPSF4-208ENST00000452047 PCDHGC3Q9UN70 934 aa12.96□□□□□ -0.33
CPSF4-208ENST00000452047 CEP295Q9C0D2 2601 aa12.96□□□□□ -0.33
CPSF4-208ENST00000452047 CACNA1EQ15878 2313 aa12.96□□□□□ -0.34
CPSF4-208ENST00000452047 EPG5Q9HCE0 2579 aa12.96□□□□□ -0.34
CPSF4-208ENST00000452047 NYNRINQ9P2P1 1898 aaKnown RBP12.95□□□□□ -0.34
CPSF4-208ENST00000452047 KCNJ18B7U540 433 aa12.95□□□□□ -0.34
CPSF4-208ENST00000452047 SYNCRIPO60506 623 aaKnown RBP12.95□□□□□ -0.34
CPSF4-208ENST00000452047 TBL1XO60907 577 aa12.95□□□□□ -0.34
CPSF4-208ENST00000452047 IGLV3-19P01714 112 aa12.95□□□□□ -0.34
CPSF4-208ENST00000452047 HLA-EP13747 358 aa12.95□□□□□ -0.34
CPSF4-208ENST00000452047 CD70P32970 193 aa12.95□□□□□ -0.34
CPSF4-208ENST00000452047 USP8P40818 1118 aa12.95□□□□□ -0.34
CPSF4-208ENST00000452047 YWHAZP63104 245 aaKnown RBP12.95□□□□□ -0.34
CPSF4-208ENST00000452047 PITX1P78337 314 aaPredicted RBP12.95□□□□□ -0.34
CPSF4-208ENST00000452047 LMAN2Q12907 356 aa12.95□□□□□ -0.34
CPSF4-208ENST00000452047 CAMK2GQ13555 558 aaPredicted RBP12.95□□□□□ -0.34
CPSF4-208ENST00000452047 TAF5Q15542 800 aa12.95□□□□□ -0.34
CPSF4-208ENST00000452047 PTPRNQ16849 979 aa12.95□□□□□ -0.34
CPSF4-208ENST00000452047 TPD52L1Q16890 204 aaPredicted RBP12.95□□□□□ -0.34
CPSF4-208ENST00000452047 TMPRSS6Q8IU80 811 aa12.95□□□□□ -0.34
CPSF4-208ENST00000452047 FAM114A1Q8IWE2 563 aa12.95□□□□□ -0.34
CPSF4-208ENST00000452047 HJURPQ8NCD3 748 aaPredicted RBP12.95□□□□□ -0.34
CPSF4-208ENST00000452047 CYB5D2Q8WUJ1 264 aa12.95□□□□□ -0.34
CPSF4-208ENST00000452047 ZNF419Q96HQ0 510 aaPredicted RBP12.95□□□□□ -0.34
CPSF4-208ENST00000452047 CPXM1Q96SM3 734 aa12.95□□□□□ -0.34
CPSF4-208ENST00000452047 TUBGCP2Q9BSJ2 902 aa12.95□□□□□ -0.34
CPSF4-208ENST00000452047 NUSAP1Q9BXS6 441 aaKnown RBP12.95□□□□□ -0.34
CPSF4-208ENST00000452047 NUCKS1Q9H1E3 243 aaKnown RBP12.95□□□□□ -0.34
CPSF4-208ENST00000452047 NDST4Q9H3R1 872 aa12.95□□□□□ -0.34
CPSF4-208ENST00000452047 CAPN10Q9HC96 672 aa12.95□□□□□ -0.34
CPSF4-208ENST00000452047 ITM2CQ9NQX7 267 aa12.95□□□□□ -0.34
CPSF4-208ENST00000452047 LMBRD1Q9NUN5 540 aa12.95□□□□□ -0.34
CPSF4-208ENST00000452047 XPO7Q9UIA9 1087 aaKnown RBP12.95□□□□□ -0.34
CPSF4-208ENST00000452047 DNAJC12Q9UKB3 198 aa12.95□□□□□ -0.34
CPSF4-208ENST00000452047 FOXN3O00409 490 aaPredicted RBP12.94□□□□□ -0.34
CPSF4-208ENST00000452047 CAPN9O14815 690 aa12.94□□□□□ -0.34
CPSF4-208ENST00000452047 KCNK5O95279 499 aa12.94□□□□□ -0.34
CPSF4-208ENST00000452047 TRUB2O95900 331 aaKnown RBP12.94□□□□□ -0.34
CPSF4-208ENST00000452047 EPHX1P07099 455 aa12.94□□□□□ -0.34
CPSF4-208ENST00000452047 DLDP09622 509 aaKnown RBP12.94□□□□□ -0.34
CPSF4-208ENST00000452047 PNMA6AP0CW24 399 aaPredicted RBP12.94□□□□□ -0.34
CPSF4-208ENST00000452047 PRKCSHP14314 528 aaPredicted RBP12.94□□□□□ -0.34
CPSF4-208ENST00000452047 ENGP17813 658 aa12.94□□□□□ -0.34
CPSF4-208ENST00000452047 CD6P30203 668 aa12.94□□□□□ -0.34
CPSF4-208ENST00000452047 CLCN1P35523 988 aa12.94□□□□□ -0.34
CPSF4-208ENST00000452047 ANP32AP39687 249 aaKnown RBP12.94□□□□□ -0.34
CPSF4-208ENST00000452047 TPMTP51580 245 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms