RNA–Protein interactions for RNA: ENST00000449049.7

SHMT2-203, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-203ENST00000449049 COPS2P61201 443 aa14.55□□□□□ -0.08
SHMT2-203ENST00000449049 ZNF211Q13398 564 aaPredicted RBP14.55□□□□□ -0.08
SHMT2-203ENST00000449049 DPYSL3Q14195 570 aa14.55□□□□□ -0.08
SHMT2-203ENST00000449049 CLUL1Q15846 466 aa14.55□□□□□ -0.08
SHMT2-203ENST00000449049 PIK3R6Q5UE93 754 aa14.55□□□□□ -0.08
SHMT2-203ENST00000449049 Q6ZNB5 142 aa14.55□□□□□ -0.08
SHMT2-203ENST00000449049 MTERF4Q7Z6M4 381 aaKnown RBP14.55□□□□□ -0.08
SHMT2-203ENST00000449049 ZSCAN18Q8TBC5 510 aaPredicted RBP14.55□□□□□ -0.08
SHMT2-203ENST00000449049 COG1Q8WTW3 980 aa14.55□□□□□ -0.08
SHMT2-203ENST00000449049 RNF25Q96BH1 459 aaPredicted RBP14.55□□□□□ -0.08
SHMT2-203ENST00000449049 DCLK3Q9C098 648 aa14.55□□□□□ -0.08
SHMT2-203ENST00000449049 SMG9Q9H0W8 520 aaKnown RBP14.55□□□□□ -0.08
SHMT2-203ENST00000449049 POMKQ9H5K3 350 aa14.55□□□□□ -0.08
SHMT2-203ENST00000449049 RCOR3Q9P2K3 495 aaPredicted RBP14.55□□□□□ -0.08
SHMT2-203ENST00000449049 STOML2Q9UJZ1 356 aa14.55□□□□□ -0.08
SHMT2-203ENST00000449049 CDH7Q9ULB5 785 aa14.55□□□□□ -0.08
SHMT2-203ENST00000449049 CCL26Q9Y258 94 aa14.55□□□□□ -0.08
SHMT2-203ENST00000449049 HS3ST4Q9Y661 456 aa14.55□□□□□ -0.08
SHMT2-203ENST00000449049 ACSL4O60488 711 aa14.54□□□□□ -0.08
SHMT2-203ENST00000449049 SRGAP2O75044 1071 aa14.54□□□□□ -0.08
SHMT2-203ENST00000449049 CDKN2BP42772 138 aa14.54□□□□□ -0.08
SHMT2-203ENST00000449049 ZNF135P52742 658 aaPredicted RBP14.54□□□□□ -0.08
SHMT2-203ENST00000449049 USP4Q13107 963 aa14.54□□□□□ -0.08
SHMT2-203ENST00000449049 KRT81Q14533 505 aa14.54□□□□□ -0.08
SHMT2-203ENST00000449049 ZNF77Q15935 545 aa14.54□□□□□ -0.08
SHMT2-203ENST00000449049 PPP2R5EQ16537 467 aa14.54□□□□□ -0.08
SHMT2-203ENST00000449049 ODF2Q5BJF6 829 aa14.54□□□□□ -0.08
SHMT2-203ENST00000449049 MS4A13Q5J8X5 152 aa14.54□□□□□ -0.08
SHMT2-203ENST00000449049 ARTNQ5T4W7 220 aa14.54□□□□□ -0.08
SHMT2-203ENST00000449049 MFSD7Q6UXD7 560 aa14.54□□□□□ -0.08
SHMT2-203ENST00000449049 SPOCD1Q6ZMY3 1216 aa14.54□□□□□ -0.08
SHMT2-203ENST00000449049 HTR3DQ70Z44 454 aa14.54□□□□□ -0.08
SHMT2-203ENST00000449049 ANKS1BQ7Z6G8 1248 aa14.54□□□□□ -0.08
SHMT2-203ENST00000449049 ARID3BQ8IVW6 561 aaPredicted RBP14.54□□□□□ -0.08
SHMT2-203ENST00000449049 MAP7D3Q8IWC1 876 aa14.54□□□□□ -0.08
SHMT2-203ENST00000449049 SH3RF2Q8TEC5 729 aa14.54□□□□□ -0.08
SHMT2-203ENST00000449049 FAF2Q96CS3 445 aa14.54□□□□□ -0.08
SHMT2-203ENST00000449049 ASB16Q96NS5 453 aa14.54□□□□□ -0.08
SHMT2-203ENST00000449049 PRMT1Q99873 361 aaKnown RBP14.54□□□□□ -0.08
SHMT2-203ENST00000449049 ZNF670Q9BS34 389 aa14.54□□□□□ -0.08
SHMT2-203ENST00000449049 KIF9Q9HAQ2 790 aa14.54□□□□□ -0.08
SHMT2-203ENST00000449049 CFAP97Q9P2B7 532 aa14.54□□□□□ -0.08
SHMT2-203ENST00000449049 OR12D3Q9UGF7 316 aa14.54□□□□□ -0.08
SHMT2-203ENST00000449049 AGO1Q9UL18 857 aaKnown RBP14.54□□□□□ -0.08
SHMT2-203ENST00000449049 USP15Q9Y4E8 981 aaPredicted RBP14.54□□□□□ -0.08
SHMT2-203ENST00000449049 REV3LO60673 3130 aa14.54□□□□□ -0.08
SHMT2-203ENST00000449049 FAM72CH0Y354 149 aa14.54□□□□□ -0.08
SHMT2-203ENST00000449049 H3BQ06 376 aaPredicted RBP14.54□□□□□ -0.08
SHMT2-203ENST00000449049 IL4RP24394 825 aa14.54□□□□□ -0.08
SHMT2-203ENST00000449049 SLC11A2P49281 568 aa14.54□□□□□ -0.08
SHMT2-203ENST00000449049 MLLT6P55198 1093 aaPredicted RBP14.54□□□□□ -0.08
SHMT2-203ENST00000449049 PPP6R3Q5H9R7 873 aaPredicted RBP14.54□□□□□ -0.08
SHMT2-203ENST00000449049 SEL1L2Q5TEA6 688 aa14.54□□□□□ -0.08
SHMT2-203ENST00000449049 FAM72AQ5TYM5 149 aa14.54□□□□□ -0.08
SHMT2-203ENST00000449049 MANEALQ5VSG8 457 aa14.54□□□□□ -0.08
SHMT2-203ENST00000449049 NADSYN1Q6IA69 706 aa14.54□□□□□ -0.08
SHMT2-203ENST00000449049 FAM72DQ6L9T8 149 aa14.54□□□□□ -0.08
SHMT2-203ENST00000449049 AADACL2Q6P093 401 aa14.54□□□□□ -0.08
SHMT2-203ENST00000449049 FAM72BQ86X60 149 aa14.54□□□□□ -0.08
SHMT2-203ENST00000449049 DENND1CQ8IV53 801 aa14.54□□□□□ -0.08
SHMT2-203ENST00000449049 CCDC50Q8IVM0 306 aa14.54□□□□□ -0.08
SHMT2-203ENST00000449049 RASGEF1CQ8N431 466 aa14.54□□□□□ -0.08
SHMT2-203ENST00000449049 SMARCD2Q92925 531 aa14.54□□□□□ -0.08
SHMT2-203ENST00000449049 TRPV4Q9HBA0 871 aa14.54□□□□□ -0.08
SHMT2-203ENST00000449049 LSM7Q9UK45 103 aaKnown RBP14.54□□□□□ -0.08
SHMT2-203ENST00000449049 SH3BP1Q9Y3L3 701 aa14.54□□□□□ -0.08
SHMT2-203ENST00000449049 SNX10Q9Y5X0 201 aa14.54□□□□□ -0.08
SHMT2-203ENST00000449049 E2F8A0AVK6 867 aa14.53□□□□□ -0.08
SHMT2-203ENST00000449049 DYNC1I1O14576 645 aa14.53□□□□□ -0.08
SHMT2-203ENST00000449049 ZNF185O15231 689 aa14.53□□□□□ -0.08
SHMT2-203ENST00000449049 HTR7P34969 479 aa14.53□□□□□ -0.08
SHMT2-203ENST00000449049 HCAR3P49019 387 aa14.53□□□□□ -0.08
SHMT2-203ENST00000449049 SMAD4Q13485 552 aaKnown RBP14.53□□□□□ -0.08
SHMT2-203ENST00000449049 FAM133BQ5BKY9 247 aaKnown RBP14.53□□□□□ -0.08
SHMT2-203ENST00000449049 TFDP3Q5H9I0 405 aa14.53□□□□□ -0.08
SHMT2-203ENST00000449049 FAM78AQ5JUQ0 283 aa14.53□□□□□ -0.08
SHMT2-203ENST00000449049 DNTTIP2Q5QJE6 756 aaKnown RBP14.53□□□□□ -0.08
SHMT2-203ENST00000449049 FAM217AQ8IXS0 508 aa14.53□□□□□ -0.08
SHMT2-203ENST00000449049 ZNF683Q8IZ20 524 aa14.53□□□□□ -0.08
SHMT2-203ENST00000449049 RIN3Q8TB24 985 aa14.53□□□□□ -0.08
SHMT2-203ENST00000449049 MYADMQ96S97 322 aa14.53□□□□□ -0.08
SHMT2-203ENST00000449049 EPAS1Q99814 870 aa14.53□□□□□ -0.08
SHMT2-203ENST00000449049 CALN1Q9BXU9 219 aa14.53□□□□□ -0.08
SHMT2-203ENST00000449049 SIK2Q9H0K1 926 aa14.53□□□□□ -0.08
SHMT2-203ENST00000449049 CWC15Q9P013 229 aaKnown RBP14.53□□□□□ -0.08
SHMT2-203ENST00000449049 TTC7AQ9ULT0 858 aaPredicted RBP14.53□□□□□ -0.08
SHMT2-203ENST00000449049 NEU3Q9UQ49 428 aa14.53□□□□□ -0.08
SHMT2-203ENST00000449049 EFR3BQ9Y2G0 817 aa14.53□□□□□ -0.08
SHMT2-203ENST00000449049 ZNF510Q9Y2H8 683 aa14.53□□□□□ -0.08
SHMT2-203ENST00000449049 ZFP37Q9Y6Q3 630 aaPredicted RBP14.53□□□□□ -0.08
SHMT2-203ENST00000449049 hCG_1818297A0A087WSY0 165 aa14.53□□□□□ -0.08
SHMT2-203ENST00000449049 UQCRHLA0A096LP55 91 aa14.53□□□□□ -0.08
SHMT2-203ENST00000449049 GRXCR2A6NFK2 248 aa14.53□□□□□ -0.08
SHMT2-203ENST00000449049 H3BRJ5 948 aa14.53□□□□□ -0.08
SHMT2-203ENST00000449049 CEP104O60308 925 aa14.53□□□□□ -0.08
SHMT2-203ENST00000449049 URI1O94763 535 aaPredicted RBP14.53□□□□□ -0.08
SHMT2-203ENST00000449049 UQCRHP07919 91 aa14.53□□□□□ -0.08
SHMT2-203ENST00000449049 KCNA5P22460 613 aa14.53□□□□□ -0.08
SHMT2-203ENST00000449049 HOXC13P31276 330 aa14.53□□□□□ -0.08
SHMT2-203ENST00000449049 CETN2P41208 172 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms