RNA–Protein interactions for RNA: ENST00000443016.1

USP6NL-203, Transcript of USP6 N-terminal like, humanhuman

TSL 2

Gene USP6NL, Length 2,491 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-203ENST00000443016 VPS16Q9H269 839 aa9.13□□□□□ -0.95
USP6NL-203ENST00000443016 EPG5Q9HCE0 2579 aa9.13□□□□□ -0.95
USP6NL-203ENST00000443016 A0A1B0GTH6 734 aa9.13□□□□□ -0.95
USP6NL-203ENST00000443016 MED19A0JLT2 244 aaPredicted RBP9.13□□□□□ -0.95
USP6NL-203ENST00000443016 CALCAP01258 141 aa9.13□□□□□ -0.95
USP6NL-203ENST00000443016 USP8P40818 1118 aa9.13□□□□□ -0.95
USP6NL-203ENST00000443016 ZNF75DP51815 510 aa9.13□□□□□ -0.95
USP6NL-203ENST00000443016 DAOAP59103 153 aa9.13□□□□□ -0.95
USP6NL-203ENST00000443016 STARD3Q14849 445 aa9.13□□□□□ -0.95
USP6NL-203ENST00000443016 PMS2CLQ68D20 193 aa9.13□□□□□ -0.95
USP6NL-203ENST00000443016 LPCAT2Q7L5N7 544 aa9.13□□□□□ -0.95
USP6NL-203ENST00000443016 CYP2U1Q7Z449 544 aa9.13□□□□□ -0.95
USP6NL-203ENST00000443016 SLC35F5Q8WV83 523 aa9.13□□□□□ -0.95
USP6NL-203ENST00000443016 UCMAQ8WVF2 138 aa9.13□□□□□ -0.95
USP6NL-203ENST00000443016 FAM149B1Q96BN6 582 aa9.13□□□□□ -0.95
USP6NL-203ENST00000443016 ACOX2Q99424 681 aa9.13□□□□□ -0.95
USP6NL-203ENST00000443016 CIPCQ9C0C6 399 aa9.13□□□□□ -0.95
USP6NL-203ENST00000443016 XPO4Q9C0E2 1151 aaKnown RBP9.13□□□□□ -0.95
USP6NL-203ENST00000443016 ACBD3Q9H3P7 528 aa9.13□□□□□ -0.95
USP6NL-203ENST00000443016 NDST4Q9H3R1 872 aa9.13□□□□□ -0.95
USP6NL-203ENST00000443016 CACNA2D2Q9NY47 1150 aa9.13□□□□□ -0.95
USP6NL-203ENST00000443016 HBS1LQ9Y450 684 aaKnown RBP9.13□□□□□ -0.95
USP6NL-203ENST00000443016 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.12□□□□□ -0.95
USP6NL-203ENST00000443016 LRRC10BA6NIK2 292 aa9.12□□□□□ -0.95
USP6NL-203ENST00000443016 SLC30A4O14863 429 aa9.12□□□□□ -0.95
USP6NL-203ENST00000443016 ADCY5O95622 1261 aa9.12□□□□□ -0.95
USP6NL-203ENST00000443016 BCKDHBP21953 392 aa9.12□□□□□ -0.95
USP6NL-203ENST00000443016 MFAP3P55082 362 aa9.12□□□□□ -0.95
USP6NL-203ENST00000443016 UBXN1Q04323 297 aa9.12□□□□□ -0.95
USP6NL-203ENST00000443016 PKDCCQ504Y2 493 aa9.12□□□□□ -0.95
USP6NL-203ENST00000443016 FYB2Q5VWT5 728 aa9.12□□□□□ -0.95
USP6NL-203ENST00000443016 TCEAL6Q6IPX3 200 aa9.12□□□□□ -0.95
USP6NL-203ENST00000443016 ARMCX6Q7L4S7 300 aa9.12□□□□□ -0.95
USP6NL-203ENST00000443016 TMEFF1Q8IYR6 380 aa9.12□□□□□ -0.95
USP6NL-203ENST00000443016 PIGKQ92643 395 aa9.12□□□□□ -0.95
USP6NL-203ENST00000443016 TCEAL3Q969E4 200 aa9.12□□□□□ -0.95
USP6NL-203ENST00000443016 HSFY1Q96LI6 401 aa9.12□□□□□ -0.95
USP6NL-203ENST00000443016 BCLAF3A2AJT9 711 aaKnown RBP9.12□□□□□ -0.95
USP6NL-203ENST00000443016 MSI1O43347 362 aaKnown RBP9.12□□□□□ -0.95
USP6NL-203ENST00000443016 MED7O43513 233 aa9.12□□□□□ -0.95
USP6NL-203ENST00000443016 TSPAN3O60637 253 aa9.12□□□□□ -0.95
USP6NL-203ENST00000443016 FBXO21O94952 628 aa9.12□□□□□ -0.95
USP6NL-203ENST00000443016 PENKP01210 267 aaPredicted RBP9.12□□□□□ -0.95
USP6NL-203ENST00000443016 LTFP02788 710 aa9.12□□□□□ -0.95
USP6NL-203ENST00000443016 NCAM1P13591 858 aa9.12□□□□□ -0.95
USP6NL-203ENST00000443016 CDC25BP30305 580 aa9.12□□□□□ -0.95
USP6NL-203ENST00000443016 P2RY2P41231 377 aa9.12□□□□□ -0.95
USP6NL-203ENST00000443016 ARHGAP44Q17R89 818 aa9.12□□□□□ -0.95
USP6NL-203ENST00000443016 MPPE1Q53F39 396 aa9.12□□□□□ -0.95
USP6NL-203ENST00000443016 TRIM65Q6PJ69 517 aa9.12□□□□□ -0.95
USP6NL-203ENST00000443016 GBP6Q6ZN66 633 aa9.12□□□□□ -0.95
USP6NL-203ENST00000443016 ENOSF1Q7L5Y1 443 aa9.12□□□□□ -0.95
USP6NL-203ENST00000443016 ANKS1BQ7Z6G8 1248 aa9.12□□□□□ -0.95
USP6NL-203ENST00000443016 SCUBE3Q8IX30 993 aa9.12□□□□□ -0.95
USP6NL-203ENST00000443016 DRC7Q8IY82 874 aa9.12□□□□□ -0.95
USP6NL-203ENST00000443016 CPXM2Q8N436 756 aa9.12□□□□□ -0.95
USP6NL-203ENST00000443016 FRMD1Q8N878 549 aa9.12□□□□□ -0.95
USP6NL-203ENST00000443016 IPO4Q8TEX9 1081 aaKnown RBP9.12□□□□□ -0.95
USP6NL-203ENST00000443016 IRGQQ8WZA9 623 aa9.12□□□□□ -0.95
USP6NL-203ENST00000443016 FAM81BQ96LP2 452 aa9.12□□□□□ -0.95
USP6NL-203ENST00000443016 KREMEN1Q96MU8 473 aa9.12□□□□□ -0.95
USP6NL-203ENST00000443016 ZSWIM1Q9BR11 485 aa9.12□□□□□ -0.95
USP6NL-203ENST00000443016 RXFP3Q9NSD7 469 aa9.12□□□□□ -0.95
USP6NL-203ENST00000443016 CALCOCO1Q9P1Z2 691 aa9.12□□□□□ -0.95
USP6NL-203ENST00000443016 RAD54BQ9Y620 910 aa9.12□□□□□ -0.95
USP6NL-203ENST00000443016 WASH3PC4AMC7 463 aa9.11□□□□□ -0.95
USP6NL-203ENST00000443016 CAPN9O14815 690 aa9.11□□□□□ -0.95
USP6NL-203ENST00000443016 KHNYNO15037 678 aaKnown RBP9.11□□□□□ -0.95
USP6NL-203ENST00000443016 SART1O43290 800 aaKnown RBP9.11□□□□□ -0.95
USP6NL-203ENST00000443016 THAP12O43422 761 aa9.11□□□□□ -0.95
USP6NL-203ENST00000443016 ZNF217O75362 1048 aa9.11□□□□□ -0.95
USP6NL-203ENST00000443016 TPM1P09493 284 aa9.11□□□□□ -0.95
USP6NL-203ENST00000443016 CISD3P0C7P0 127 aa9.11□□□□□ -0.95
USP6NL-203ENST00000443016 GABRG2P18507 467 aa9.11□□□□□ -0.95
USP6NL-203ENST00000443016 GNA15P30679 374 aa9.11□□□□□ -0.95
USP6NL-203ENST00000443016 DNAJA1P31689 397 aaKnown RBP9.11□□□□□ -0.95
USP6NL-203ENST00000443016 SLC11A2P49281 568 aa9.11□□□□□ -0.95
USP6NL-203ENST00000443016 RPL6Q02878 288 aaKnown RBP9.11□□□□□ -0.95
USP6NL-203ENST00000443016 CBLBQ13191 982 aa9.11□□□□□ -0.95
USP6NL-203ENST00000443016 E2F5Q15329 346 aa9.11□□□□□ -0.95
USP6NL-203ENST00000443016 TRIP4Q15650 581 aaPredicted RBP9.11□□□□□ -0.95
USP6NL-203ENST00000443016 EXOC3L4Q17RC7 722 aa9.11□□□□□ -0.95
USP6NL-203ENST00000443016 GEN1Q17RS7 908 aa9.11□□□□□ -0.95
USP6NL-203ENST00000443016 PLA2G2CQ5R387 149 aa9.11□□□□□ -0.95
USP6NL-203ENST00000443016 ADGRF1Q5T601 910 aa9.11□□□□□ -0.95
USP6NL-203ENST00000443016 RNF43Q68DV7 783 aa9.11□□□□□ -0.95
USP6NL-203ENST00000443016 BHLHA9Q7RTU4 235 aa9.11□□□□□ -0.95
USP6NL-203ENST00000443016 UNC45BQ8IWX7 931 aa9.11□□□□□ -0.95
USP6NL-203ENST00000443016 RAVER1Q8IY67 606 aaKnown RBP9.11□□□□□ -0.95
USP6NL-203ENST00000443016 OLIG1Q8TAK6 271 aa9.11□□□□□ -0.95
USP6NL-203ENST00000443016 DDX1Q92499 740 aaKnown RBP9.11□□□□□ -0.95
USP6NL-203ENST00000443016 IQCDQ96DY2 449 aa9.11□□□□□ -0.95
USP6NL-203ENST00000443016 TMA16Q96EY4 203 aaKnown RBP9.11□□□□□ -0.95
USP6NL-203ENST00000443016 SLC27A6Q9Y2P4 619 aa9.11□□□□□ -0.95
USP6NL-203ENST00000443016 A0A1W2PQC6 194 aa9.11□□□□□ -0.95
USP6NL-203ENST00000443016 A0A1W2PQF6 199 aa9.11□□□□□ -0.95
USP6NL-203ENST00000443016 GTPBP10A4D1E9 387 aaKnown RBP9.11□□□□□ -0.95
USP6NL-203ENST00000443016 AP5Z1O43299 807 aa9.11□□□□□ -0.95
USP6NL-203ENST00000443016 SYNCRIPO60506 623 aaKnown RBP9.11□□□□□ -0.95
USP6NL-203ENST00000443016 ZNF132P52740 706 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms