RNA–Protein interactions for RNA: ENST00000442975.6

CDKN3-204, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 1 (best) BASIC

Gene CDKN3, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-204ENST00000442975 ABCB8Q9NUT2 735 aa21.87■■□□□ 1.09
CDKN3-204ENST00000442975 DDIT4Q9NX09 232 aa21.87■■□□□ 1.09
CDKN3-204ENST00000442975 ELOVL2Q9NXB9 296 aa21.87■■□□□ 1.09
CDKN3-204ENST00000442975 LIMA1Q9UHB6 759 aaKnown RBP21.87■■□□□ 1.09
CDKN3-204ENST00000442975 DYNC1LI1Q9Y6G9 523 aaKnown RBP21.87■■□□□ 1.09
CDKN3-204ENST00000442975 STON1Q9Y6Q2 735 aa21.87■■□□□ 1.09
CDKN3-204ENST00000442975 DMXL1Q9Y485 3027 aa21.87■■□□□ 1.09
CDKN3-204ENST00000442975 EPHB6O15197 1021 aa21.86■■□□□ 1.09
CDKN3-204ENST00000442975 GFPT2O94808 682 aa21.86■■□□□ 1.09
CDKN3-204ENST00000442975 GLI1P08151 1106 aa21.86■■□□□ 1.09
CDKN3-204ENST00000442975 GABRG2P18507 467 aa21.86■■□□□ 1.09
CDKN3-204ENST00000442975 HLA-FP30511 346 aa21.86■■□□□ 1.09
CDKN3-204ENST00000442975 IL12RB1P42701 662 aa21.86■■□□□ 1.09
CDKN3-204ENST00000442975 CREB5Q02930 508 aa21.86■■□□□ 1.09
CDKN3-204ENST00000442975 CSRP2Q16527 193 aa21.86■■□□□ 1.09
CDKN3-204ENST00000442975 CHSY1Q86X52 802 aa21.86■■□□□ 1.09
CDKN3-204ENST00000442975 OLIG1Q8TAK6 271 aa21.86■■□□□ 1.09
CDKN3-204ENST00000442975 RNF34Q969K3 372 aa21.86■■□□□ 1.09
CDKN3-204ENST00000442975 SLC2A13Q96QE2 648 aa21.86■■□□□ 1.09
CDKN3-204ENST00000442975 SPAG5Q96R06 1193 aa21.86■■□□□ 1.09
CDKN3-204ENST00000442975 ASNSD1Q9NWL6 643 aa21.86■■□□□ 1.09
CDKN3-204ENST00000442975 XPO7Q9UIA9 1087 aaKnown RBP21.86■■□□□ 1.09
CDKN3-204ENST00000442975 GGA2Q9UJY4 613 aa21.86■■□□□ 1.09
CDKN3-204ENST00000442975 MAP3K13O43283 966 aa21.85■■□□□ 1.09
CDKN3-204ENST00000442975 DAB1O75553 588 aa21.85■■□□□ 1.09
CDKN3-204ENST00000442975 NDUFV2P19404 249 aa21.85■■□□□ 1.09
CDKN3-204ENST00000442975 MPLP40238 635 aa21.85■■□□□ 1.09
CDKN3-204ENST00000442975 P2RY2P41231 377 aa21.85■■□□□ 1.09
CDKN3-204ENST00000442975 UBXN1Q04323 297 aa21.85■■□□□ 1.09
CDKN3-204ENST00000442975 NCAPHQ15003 741 aa21.85■■□□□ 1.09
CDKN3-204ENST00000442975 RSPO4Q2I0M5 234 aaPredicted RBP21.85■■□□□ 1.09
CDKN3-204ENST00000442975 PMS2CLQ68D20 193 aa21.85■■□□□ 1.09
CDKN3-204ENST00000442975 KIAA1324Q6UXG2 1013 aaKnown RBP21.85■■□□□ 1.09
CDKN3-204ENST00000442975 PRR23CQ6ZRP0 262 aa21.85■■□□□ 1.09
CDKN3-204ENST00000442975 ARMCX6Q7L4S7 300 aa21.85■■□□□ 1.09
CDKN3-204ENST00000442975 MFN1Q8IWA4 741 aa21.85■■□□□ 1.09
CDKN3-204ENST00000442975 EPS8L1Q8TE68 723 aa21.85■■□□□ 1.09
CDKN3-204ENST00000442975 WFIKKN2Q8TEU8 576 aa21.85■■□□□ 1.09
CDKN3-204ENST00000442975 AZIN2Q96A70 460 aa21.85■■□□□ 1.09
CDKN3-204ENST00000442975 MYEOVQ96EZ4 313 aa21.85■■□□□ 1.09
CDKN3-204ENST00000442975 SLC6A17Q9H1V8 727 aa21.85■■□□□ 1.09
CDKN3-204ENST00000442975 SMOC1Q9H4F8 434 aa21.85■■□□□ 1.09
CDKN3-204ENST00000442975 THAP10Q9P2Z0 257 aaPredicted RBP21.85■■□□□ 1.09
CDKN3-204ENST00000442975 CDV3Q9UKY7 258 aaKnown RBP21.85■■□□□ 1.09
CDKN3-204ENST00000442975 SIK3Q9Y2K2 1263 aa21.85■■□□□ 1.09
CDKN3-204ENST00000442975 SPTBN4Q9H254 2564 aa21.84■■□□□ 1.09
CDKN3-204ENST00000442975 SYNCRIPO60506 623 aaKnown RBP21.84■■□□□ 1.09
CDKN3-204ENST00000442975 LSM8O95777 96 aaKnown RBP21.84■■□□□ 1.09
CDKN3-204ENST00000442975 IGLV3-25P01717 112 aa21.84■■□□□ 1.09
CDKN3-204ENST00000442975 PABPC1P11940 636 aaKnown RBP21.84■■□□□ 1.09
CDKN3-204ENST00000442975 ZNF18P17022 549 aa21.84■■□□□ 1.09
CDKN3-204ENST00000442975 RPS24P62847 133 aaKnown RBP21.84■■□□□ 1.09
CDKN3-204ENST00000442975 SLC6A3Q01959 620 aa21.84■■□□□ 1.09
CDKN3-204ENST00000442975 NME3Q13232 169 aa21.84■■□□□ 1.09
CDKN3-204ENST00000442975 CDH18Q13634 790 aa21.84■■□□□ 1.09
CDKN3-204ENST00000442975 ZNF234Q14588 700 aa21.84■■□□□ 1.09
CDKN3-204ENST00000442975 NAA35Q5VZE5 725 aa21.84■■□□□ 1.09
CDKN3-204ENST00000442975 RAP1GAP2Q684P5 730 aa21.84■■□□□ 1.09
CDKN3-204ENST00000442975 TMEM215Q68D42 235 aa21.84■■□□□ 1.09
CDKN3-204ENST00000442975 SERPINA13PQ6UXR4 307 aa21.84■■□□□ 1.09
CDKN3-204ENST00000442975 CHST9Q7L1S5 443 aa21.84■■□□□ 1.09
CDKN3-204ENST00000442975 SLC26A9Q7LBE3 791 aa21.84■■□□□ 1.09
CDKN3-204ENST00000442975 CCDC117Q8IWD4 279 aaPredicted RBP21.84■■□□□ 1.09
CDKN3-204ENST00000442975 AHI1Q8N157 1196 aa21.84■■□□□ 1.09
CDKN3-204ENST00000442975 CFAP52Q8N1V2 620 aa21.84■■□□□ 1.09
CDKN3-204ENST00000442975 FRMD1Q8N878 549 aa21.84■■□□□ 1.09
CDKN3-204ENST00000442975 C12orf50Q8NA57 414 aaPredicted RBP21.84■■□□□ 1.09
CDKN3-204ENST00000442975 NEK11Q8NG66 645 aa21.84■■□□□ 1.09
CDKN3-204ENST00000442975 WFDC5Q8TCV5 224 aa21.84■■□□□ 1.09
CDKN3-204ENST00000442975 CYB5D2Q8WUJ1 264 aa21.84■■□□□ 1.09
CDKN3-204ENST00000442975 SLC20A1Q8WUM9 679 aa21.84■■□□□ 1.09
CDKN3-204ENST00000442975 DDX1Q92499 740 aaKnown RBP21.84■■□□□ 1.09
CDKN3-204ENST00000442975 PCDHGA5Q9Y5G8 931 aa21.84■■□□□ 1.09
CDKN3-204ENST00000442975 NPC1O15118 1278 aa21.83■■□□□ 1.09
CDKN3-204ENST00000442975 MMEP08473 750 aa21.83■■□□□ 1.09
CDKN3-204ENST00000442975 ATP1A3P13637 1013 aa21.83■■□□□ 1.09
CDKN3-204ENST00000442975 PRKCHP24723 683 aa21.83■■□□□ 1.09
CDKN3-204ENST00000442975 CD70P32970 193 aa21.83■■□□□ 1.09
CDKN3-204ENST00000442975 DHPSP49366 369 aaPredicted RBP21.83■■□□□ 1.09
CDKN3-204ENST00000442975 RNASE9P60153 205 aaKnown RBP21.83■■□□□ 1.09
CDKN3-204ENST00000442975 BYSLQ13895 437 aaKnown RBP21.83■■□□□ 1.09
CDKN3-204ENST00000442975 SF3A2Q15428 464 aaKnown RBP21.83■■□□□ 1.09
CDKN3-204ENST00000442975 MAP7D1Q3KQU3 841 aa21.83■■□□□ 1.09
CDKN3-204ENST00000442975 AASDHQ4L235 1098 aaPredicted RBP21.83■■□□□ 1.09
CDKN3-204ENST00000442975 FNDC3BQ53EP0 1204 aaKnown RBP21.83■■□□□ 1.09
CDKN3-204ENST00000442975 MS4A13Q5J8X5 152 aa21.83■■□□□ 1.09
CDKN3-204ENST00000442975 MPP7Q5T2T1 576 aa21.83■■□□□ 1.09
CDKN3-204ENST00000442975 FAM102AQ5T9C2 384 aaPredicted RBP21.83■■□□□ 1.09
CDKN3-204ENST00000442975 CYP2U1Q7Z449 544 aa21.83■■□□□ 1.09
CDKN3-204ENST00000442975 ERICH1Q86X53 443 aa21.83■■□□□ 1.09
CDKN3-204ENST00000442975 CACUL1Q86Y37 369 aa21.83■■□□□ 1.09
CDKN3-204ENST00000442975 ZDHHC17Q8IUH5 632 aa21.83■■□□□ 1.09
CDKN3-204ENST00000442975 LGI2Q8N0V4 545 aa21.83■■□□□ 1.09
CDKN3-204ENST00000442975 CARNMT1Q8N4J0 409 aa21.83■■□□□ 1.09
CDKN3-204ENST00000442975 ATP6V0D2Q8N8Y2 350 aa21.83■■□□□ 1.09
CDKN3-204ENST00000442975 MSANTD4Q8NCY6 345 aa21.83■■□□□ 1.09
CDKN3-204ENST00000442975 BTN2A3PQ96KV6 586 aa21.83■■□□□ 1.09
CDKN3-204ENST00000442975 SLC12A6Q9UHW9 1150 aa21.83■■□□□ 1.09
CDKN3-204ENST00000442975 LOC105378220A0A1B0GUY1 285 aaPredicted RBP21.82■■□□□ 1.08
CDKN3-204ENST00000442975 PRR5-ARHGAP8B1AHC4 643 aa21.82■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms