RNA–Protein interactions for RNA: ENST00000442708.5

USP39-205, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-205ENST00000442708 FAM170BA6NMN3 283 aa16.62■□□□□ 0.25
USP39-205ENST00000442708 STK25O00506 426 aa16.62■□□□□ 0.25
USP39-205ENST00000442708 MAN2B1O00754 1011 aa16.62■□□□□ 0.25
USP39-205ENST00000442708 F9P00740 461 aa16.62■□□□□ 0.25
USP39-205ENST00000442708 PENKP01210 267 aaPredicted RBP16.62■□□□□ 0.25
USP39-205ENST00000442708 TYRP14679 529 aa16.62■□□□□ 0.25
USP39-205ENST00000442708 RDXP35241 583 aaKnown RBP16.62■□□□□ 0.25
USP39-205ENST00000442708 CHKAP35790 457 aa16.62■□□□□ 0.25
USP39-205ENST00000442708 GGCXP38435 758 aa16.62■□□□□ 0.25
USP39-205ENST00000442708 GAD2Q05329 585 aa16.62■□□□□ 0.25
USP39-205ENST00000442708 UBXN2BQ14CS0 331 aa16.62■□□□□ 0.25
USP39-205ENST00000442708 MS4A13Q5J8X5 152 aa16.62■□□□□ 0.25
USP39-205ENST00000442708 RAP1GAP2Q684P5 730 aa16.62■□□□□ 0.25
USP39-205ENST00000442708 FSTL4Q6MZW2 842 aa16.62■□□□□ 0.25
USP39-205ENST00000442708 DCUN1D2Q6PH85 259 aa16.62■□□□□ 0.25
USP39-205ENST00000442708 FAM131BQ86XD5 332 aa16.62■□□□□ 0.25
USP39-205ENST00000442708 PHTF2Q8N3S3 785 aa16.62■□□□□ 0.25
USP39-205ENST00000442708 ARFGAP1Q8N6T3 406 aa16.62■□□□□ 0.25
USP39-205ENST00000442708 ATP6V0D2Q8N8Y2 350 aa16.62■□□□□ 0.25
USP39-205ENST00000442708 PJA1Q8NG27 643 aa16.62■□□□□ 0.25
USP39-205ENST00000442708 FAM172AQ8WUF8 416 aa16.62■□□□□ 0.25
USP39-205ENST00000442708 MSANTD3Q96H12 275 aa16.62■□□□□ 0.25
USP39-205ENST00000442708 BTN2A3PQ96KV6 586 aa16.62■□□□□ 0.25
USP39-205ENST00000442708 MAGEB5Q9BZ81 275 aa16.62■□□□□ 0.25
USP39-205ENST00000442708 TKTL2Q9H0I9 626 aa16.62■□□□□ 0.25
USP39-205ENST00000442708 WDCPQ9H6R7 721 aa16.62■□□□□ 0.25
USP39-205ENST00000442708 ANKRD62A6NC57 917 aa16.61■□□□□ 0.25
USP39-205ENST00000442708 CACNG3O60359 315 aa16.61■□□□□ 0.25
USP39-205ENST00000442708 PAGE1O75459 146 aa16.61■□□□□ 0.25
USP39-205ENST00000442708 SLC2A3P11169 496 aa16.61■□□□□ 0.25
USP39-205ENST00000442708 TMEM196Q5HYL7 178 aa16.61■□□□□ 0.25
USP39-205ENST00000442708 BRMS1LQ5PSV4 323 aa16.61■□□□□ 0.25
USP39-205ENST00000442708 ASTLQ6HA08 431 aaPredicted RBP16.61■□□□□ 0.25
USP39-205ENST00000442708 RAD9BQ6WBX8 426 aa16.61■□□□□ 0.25
USP39-205ENST00000442708 STRADAQ7RTN6 431 aa16.61■□□□□ 0.25
USP39-205ENST00000442708 C14orf80Q86SX3 495 aa16.61■□□□□ 0.25
USP39-205ENST00000442708 CCDC105Q8IYK2 499 aa16.61■□□□□ 0.25
USP39-205ENST00000442708 BTBD6Q96KE9 485 aa16.61■□□□□ 0.25
USP39-205ENST00000442708 P2RY13Q9BPV8 354 aa16.61■□□□□ 0.25
USP39-205ENST00000442708 CNPY3Q9BT09 278 aa16.61■□□□□ 0.25
USP39-205ENST00000442708 NUP85Q9BW27 656 aa16.61■□□□□ 0.25
USP39-205ENST00000442708 RBM12Q9NTZ6 932 aaKnown RBP16.61■□□□□ 0.25
USP39-205ENST00000442708 HS3ST4Q9Y661 456 aa16.61■□□□□ 0.25
USP39-205ENST00000442708 SCINQ9Y6U3 715 aa16.61■□□□□ 0.25
USP39-205ENST00000442708 ATG2BQ96BY7 2078 aa16.61■□□□□ 0.25
USP39-205ENST00000442708 ZDBF2Q9HCK1 2354 aa16.6■□□□□ 0.25
USP39-205ENST00000442708 PRR33A8MZF0 331 aa16.6■□□□□ 0.25
USP39-205ENST00000442708 TULP3O75386 442 aa16.6■□□□□ 0.25
USP39-205ENST00000442708 LCA5LO95447 670 aa16.6■□□□□ 0.25
USP39-205ENST00000442708 EGFP01133 1207 aa16.6■□□□□ 0.25
USP39-205ENST00000442708 DCNP07585 359 aaKnown RBP16.6■□□□□ 0.25
USP39-205ENST00000442708 H2AFZP0C0S5 128 aa16.6■□□□□ 0.25
USP39-205ENST00000442708 CISD3P0C7P0 127 aa16.6■□□□□ 0.25
USP39-205ENST00000442708 CHRNB1P11230 501 aa16.6■□□□□ 0.25
USP39-205ENST00000442708 AOC1P19801 751 aa16.6■□□□□ 0.25
USP39-205ENST00000442708 TACR2P21452 398 aa16.6■□□□□ 0.25
USP39-205ENST00000442708 HOXD9P28356 352 aaPredicted RBP16.6■□□□□ 0.25
USP39-205ENST00000442708 IRAK1P51617 712 aa16.6■□□□□ 0.25
USP39-205ENST00000442708 RPS24P62847 133 aaKnown RBP16.6■□□□□ 0.25
USP39-205ENST00000442708 KDSRQ06136 332 aa16.6■□□□□ 0.25
USP39-205ENST00000442708 TMEM31Q5JXX7 168 aa16.6■□□□□ 0.25
USP39-205ENST00000442708 RNF43Q68DV7 783 aa16.6■□□□□ 0.25
USP39-205ENST00000442708 H2AFVQ71UI9 128 aa16.6■□□□□ 0.25
USP39-205ENST00000442708 SND1Q7KZF4 910 aaKnown RBP eCLIP16.6■□□□□ 0.25
USP39-205ENST00000442708 LGI2Q8N0V4 545 aa16.6■□□□□ 0.25
USP39-205ENST00000442708 CFAP52Q8N1V2 620 aa16.6■□□□□ 0.25
USP39-205ENST00000442708 FBXL6Q8N531 539 aa16.6■□□□□ 0.25
USP39-205ENST00000442708 CCDC185Q8N715 623 aa16.6■□□□□ 0.25
USP39-205ENST00000442708 TMEM105Q8N8V8 129 aa16.6■□□□□ 0.25
USP39-205ENST00000442708 DDI1Q8WTU0 396 aa16.6■□□□□ 0.25
USP39-205ENST00000442708 CD101Q93033 1021 aa16.6■□□□□ 0.25
USP39-205ENST00000442708 LRFN3Q9BTN0 628 aa16.6■□□□□ 0.25
USP39-205ENST00000442708 DLGAP2Q9P1A6 1054 aa16.6■□□□□ 0.25
USP39-205ENST00000442708 FBXO10Q9UK96 956 aa16.6■□□□□ 0.25
USP39-205ENST00000442708 TFR2Q9UP52 801 aa16.6■□□□□ 0.25
USP39-205ENST00000442708 TBL1XO60907 577 aa16.59■□□□□ 0.25
USP39-205ENST00000442708 TMEM253P0C7T8 217 aa16.59■□□□□ 0.25
USP39-205ENST00000442708 PSMA2P25787 234 aa16.59■□□□□ 0.25
USP39-205ENST00000442708 ADRA1BP35368 520 aa16.59■□□□□ 0.25
USP39-205ENST00000442708 CCINQ13939 588 aa16.59■□□□□ 0.25
USP39-205ENST00000442708 MPPE1Q53F39 396 aa16.59■□□□□ 0.25
USP39-205ENST00000442708 DAB2IPQ5VWQ8 1189 aa16.59■□□□□ 0.25
USP39-205ENST00000442708 FBXL22Q6P050 247 aa16.59■□□□□ 0.25
USP39-205ENST00000442708 CHSY1Q86X52 802 aa16.59■□□□□ 0.25
USP39-205ENST00000442708 CIR1Q86X95 450 aaPredicted RBP16.59■□□□□ 0.25
USP39-205ENST00000442708 TMTC1Q8IUR5 882 aa16.59■□□□□ 0.25
USP39-205ENST00000442708 CCDC170Q8IYT3 715 aa16.59■□□□□ 0.25
USP39-205ENST00000442708 ZNF683Q8IZ20 524 aa16.59■□□□□ 0.25
USP39-205ENST00000442708 WFDC5Q8TCV5 224 aa16.59■□□□□ 0.25
USP39-205ENST00000442708 IGSF8Q969P0 613 aa16.59■□□□□ 0.25
USP39-205ENST00000442708 TMA16Q96EY4 203 aaKnown RBP16.59■□□□□ 0.25
USP39-205ENST00000442708 C1QTNF1Q9BXJ1 281 aa16.59■□□□□ 0.25
USP39-205ENST00000442708 SIK2Q9H0K1 926 aa16.59■□□□□ 0.25
USP39-205ENST00000442708 MRPL47Q9HD33 250 aaKnown RBP16.59■□□□□ 0.25
USP39-205ENST00000442708 DNAJC17Q9NVM6 304 aaKnown RBP16.59■□□□□ 0.25
USP39-205ENST00000442708 SLC12A6Q9UHW9 1150 aa16.59■□□□□ 0.25
USP39-205ENST00000442708 REXO2Q9Y3B8 237 aaKnown RBP16.59■□□□□ 0.25
USP39-205ENST00000442708 SIT1Q9Y3P8 196 aa16.59■□□□□ 0.25
USP39-205ENST00000442708 DOCK4Q8N1I0 1966 aa16.58■□□□□ 0.25
USP39-205ENST00000442708 EIF3CLB5ME19 914 aaKnown RBP16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms